RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 MS4A3Q96HJ5 214 aa7□□□□□ -1.29
ITGB1-213ENST00000484088 PLCD3Q8N3E9 789 aa6.99□□□□□ -1.29
ITGB1-213ENST00000484088 FBXO3Q9UK99 471 aa6.97□□□□□ -1.29
ITGB1-213ENST00000484088 MAP3K13O43283 966 aa6.96□□□□□ -1.3
ITGB1-213ENST00000484088 POTEB2H3BUK9 544 aa6.94□□□□□ -1.3
ITGB1-213ENST00000484088 POTEFA5A3E0 1075 aa6.91□□□□□ -1.3
ITGB1-213ENST00000484088 ATMINO43313 823 aaPredicted RBP6.91□□□□□ -1.3
ITGB1-213ENST00000484088 CLCN6P51797 869 aa6.91□□□□□ -1.3
ITGB1-213ENST00000484088 ASTLQ6HA08 431 aaPredicted RBP6.91□□□□□ -1.3
ITGB1-213ENST00000484088 POTEJP0CG39 1038 aa6.9□□□□□ -1.3
ITGB1-213ENST00000484088 IFNL1Q8IU54 200 aa6.89□□□□□ -1.31
ITGB1-213ENST00000484088 BMP2KQ9NSY1 1161 aaPredicted RBP6.89□□□□□ -1.31
ITGB1-213ENST00000484088 PAK3O75914 559 aaPredicted RBP6.88□□□□□ -1.31
ITGB1-213ENST00000484088 ATN1P54259 1190 aaPredicted RBP6.88□□□□□ -1.31
ITGB1-213ENST00000484088 PYGBP11216 843 aa6.86□□□□□ -1.31
ITGB1-213ENST00000484088 PLEKHG5O94827 1062 aa6.85□□□□□ -1.31
ITGB1-213ENST00000484088 ZBTB47Q9UFB7 747 aaPredicted RBP6.85□□□□□ -1.31
ITGB1-213ENST00000484088 DCBLD2Q96PD2 775 aa6.84□□□□□ -1.31
ITGB1-213ENST00000484088 TTLL13PA6NNM8 815 aa6.83□□□□□ -1.32
ITGB1-213ENST00000484088 DCAF8Q5TAQ9 597 aa6.83□□□□□ -1.32
ITGB1-213ENST00000484088 LHX8Q68G74 356 aa6.83□□□□□ -1.32
ITGB1-213ENST00000484088 FAM212AQ96EL1 285 aa6.83□□□□□ -1.32
ITGB1-213ENST00000484088 SGIP1Q9BQI5 828 aa6.83□□□□□ -1.32
ITGB1-213ENST00000484088 PCDHB8Q9UN66 801 aa6.83□□□□□ -1.32
ITGB1-213ENST00000484088 PCDHB13Q9Y5F0 798 aa6.83□□□□□ -1.32
ITGB1-213ENST00000484088 KLHL34Q8N239 644 aa6.82□□□□□ -1.32
ITGB1-213ENST00000484088 SPOCK2Q92563 424 aa6.82□□□□□ -1.32
ITGB1-213ENST00000484088 CHRM1P11229 460 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-213ENST00000484088 TIE1P35590 1138 aa6.8□□□□□ -1.32
ITGB1-213ENST00000484088 RNF25Q96BH1 459 aaPredicted RBP6.8□□□□□ -1.32
ITGB1-213ENST00000484088 COLQQ9Y215 455 aaPredicted RBP6.8□□□□□ -1.32
ITGB1-213ENST00000484088 OTUD5Q96G74 571 aa6.79□□□□□ -1.32
ITGB1-213ENST00000484088 METRNQ9UJH8 293 aa6.77□□□□□ -1.33
ITGB1-213ENST00000484088 GSE1Q14687 1217 aa6.75□□□□□ -1.33
ITGB1-213ENST00000484088 TRIM35Q9UPQ4 493 aa6.75□□□□□ -1.33
ITGB1-213ENST00000484088 PKD2Q13563 968 aa6.73□□□□□ -1.33
ITGB1-213ENST00000484088 SLC39A7Q92504 469 aa6.73□□□□□ -1.33
ITGB1-213ENST00000484088 TMEM106CQ9BVX2 250 aa6.73□□□□□ -1.33
ITGB1-213ENST00000484088 C7P10643 843 aa6.72□□□□□ -1.33
ITGB1-213ENST00000484088 IRX5P78411 483 aaPredicted RBP6.72□□□□□ -1.33
ITGB1-213ENST00000484088 ILDR1Q86SU0 546 aaPredicted RBP6.71□□□□□ -1.34
ITGB1-213ENST00000484088 CIZ1Q9ULV3 898 aaPredicted RBP6.71□□□□□ -1.34
ITGB1-213ENST00000484088 LCE2DQ5TA82 110 aaPredicted RBP6.68□□□□□ -1.34
ITGB1-213ENST00000484088 PDCD7Q8N8D1 485 aaKnown RBP6.68□□□□□ -1.34
ITGB1-213ENST00000484088 PSEN1P49768 467 aa6.67□□□□□ -1.34
ITGB1-213ENST00000484088 IER5LQ5T953 404 aa6.67□□□□□ -1.34
ITGB1-213ENST00000484088 ZNF467Q7Z7K2 595 aaPredicted RBP6.66□□□□□ -1.34
ITGB1-213ENST00000484088 RGL2O15211 777 aa6.63□□□□□ -1.35
ITGB1-213ENST00000484088 DPY19L2Q6NUT2 758 aa6.63□□□□□ -1.35
ITGB1-213ENST00000484088 PDAP1Q13442 181 aaKnown RBP6.62□□□□□ -1.35
ITGB1-213ENST00000484088 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.6□□□□□ -1.35
ITGB1-213ENST00000484088 ZFP91Q96JP5 570 aaPredicted RBP6.6□□□□□ -1.35
ITGB1-213ENST00000484088 MS4A4AQ96JQ5 239 aa6.6□□□□□ -1.35
ITGB1-213ENST00000484088 RIOK3O14730 519 aaKnown RBP6.59□□□□□ -1.35
ITGB1-213ENST00000484088 OCEL1Q9H607 264 aa6.59□□□□□ -1.35
ITGB1-213ENST00000484088 EFCAB3Q8N7B9 438 aa6.58□□□□□ -1.36
ITGB1-213ENST00000484088 TRIM41Q8WV44 630 aa6.58□□□□□ -1.36
ITGB1-213ENST00000484088 CABP2Q9NPB3 220 aa6.58□□□□□ -1.36
ITGB1-213ENST00000484088 SEC24BO95487 1268 aa6.55□□□□□ -1.36
ITGB1-213ENST00000484088 ECM2O94769 699 aaPredicted RBP6.54□□□□□ -1.36
ITGB1-213ENST00000484088 FBXO22Q8NEZ5 403 aa6.54□□□□□ -1.36
ITGB1-213ENST00000484088 VGFO15240 615 aaPredicted RBP6.53□□□□□ -1.36
ITGB1-213ENST00000484088 PLCG2P16885 1265 aa6.53□□□□□ -1.36
ITGB1-213ENST00000484088 RTN4Q9NQC3 1192 aaKnown RBP6.53□□□□□ -1.36
ITGB1-213ENST00000484088 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.53□□□□□ -1.361e-8■□□□□ 11.1
ITGB1-213ENST00000484088 TMEM92Q6UXU6 159 aa6.52□□□□□ -1.37
ITGB1-213ENST00000484088 TMEM121BQ9BXQ6 578 aaPredicted RBP6.52□□□□□ -1.37
ITGB1-213ENST00000484088 MFRPQ9BY79 579 aa6.52□□□□□ -1.37
ITGB1-213ENST00000484088 BCL11BQ9C0K0 894 aaPredicted RBP6.51□□□□□ -1.37
ITGB1-213ENST00000484088 PHF8Q9UPP1 1060 aa6.51□□□□□ -1.37
ITGB1-213ENST00000484088 MKRN3Q13064 507 aaKnown RBP6.5□□□□□ -1.37
ITGB1-213ENST00000484088 MAMSTRQ6ZN01 415 aa6.49□□□□□ -1.37
ITGB1-213ENST00000484088 NKX1-1Q15270 411 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-213ENST00000484088 SCUBE2Q9NQ36 999 aa6.47□□□□□ -1.37
ITGB1-213ENST00000484088 PPP1R37O75864 691 aa6.46□□□□□ -1.38
ITGB1-213ENST00000484088 SLAIN1Q8ND83 568 aa6.46□□□□□ -1.38
ITGB1-213ENST00000484088 SOX12O15370 315 aa6.44□□□□□ -1.38
ITGB1-213ENST00000484088 AMER1Q5JTC6 1135 aaPredicted RBP6.44□□□□□ -1.38
ITGB1-213ENST00000484088 MICALL2Q8IY33 904 aa6.44□□□□□ -1.38
ITGB1-213ENST00000484088 BOLA1Q9Y3E2 137 aa6.44□□□□□ -1.38
ITGB1-213ENST00000484088 STK24Q9Y6E0 443 aa6.44□□□□□ -1.38
ITGB1-213ENST00000484088 STK25O00506 426 aa6.43□□□□□ -1.38
ITGB1-213ENST00000484088 ST18O60284 1047 aa6.43□□□□□ -1.38
ITGB1-213ENST00000484088 HOXB3P14651 431 aaPredicted RBP6.43□□□□□ -1.38
ITGB1-213ENST00000484088 GOLGA2Q08379 1002 aa6.43□□□□□ -1.38
ITGB1-213ENST00000484088 POTEMA6NI47 508 aa6.42□□□□□ -1.38
ITGB1-213ENST00000484088 HS6ST3Q8IZP7 471 aa6.42□□□□□ -1.38
ITGB1-213ENST00000484088 DNAJC5Q9H3Z4 198 aa6.42□□□□□ -1.38
ITGB1-213ENST00000484088 POTEB3A0JP26 581 aa6.41□□□□□ -1.38
ITGB1-213ENST00000484088 POTEBQ6S5H4 581 aa6.41□□□□□ -1.38
ITGB1-213ENST00000484088 POTEGQ6S5H5 508 aa6.41□□□□□ -1.38
ITGB1-213ENST00000484088 FAM163AQ96GL9 167 aaPredicted RBP6.41□□□□□ -1.38
ITGB1-213ENST00000484088 L3MBTL3Q96JM7 780 aaPredicted RBP6.4□□□□□ -1.38
ITGB1-213ENST00000484088 KIF3CO14782 793 aa6.39□□□□□ -1.39
ITGB1-213ENST00000484088 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.39□□□□□ -1.39
ITGB1-213ENST00000484088 NLRP6P59044 892 aa6.36□□□□□ -1.39
ITGB1-213ENST00000484088 CHGAP10645 457 aaKnown RBP6.35□□□□□ -1.39
ITGB1-213ENST00000484088 C3orf67Q6ZVT6 689 aa6.34□□□□□ -1.39
ITGB1-213ENST00000484088 GTPBP6O43824 516 aaPredicted RBP6.33□□□□□ -1.4
ITGB1-213ENST00000484088 MARVELD3Q96A59 401 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms