RNA–Protein interactions for RNA: ENST00000484006.1

THUMPD3-209, Transcript of THUMP domain containing 3, humanhuman

TSL 4

Gene THUMPD3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-209ENST00000484006 CCDC61Q9Y6R9 512 aa13.5□□□□□ -0.25
THUMPD3-209ENST00000484006 RASEFQ8IZ41 740 aa13.47□□□□□ -0.25
THUMPD3-209ENST00000484006 MS4A3Q96HJ5 214 aa13.44□□□□□ -0.26
THUMPD3-209ENST00000484006 KIF12Q96FN5 646 aa13.41□□□□□ -0.26
THUMPD3-209ENST00000484006 NUBP1P53384 320 aa13.4□□□□□ -0.26
THUMPD3-209ENST00000484006 MAP3K13O43283 966 aa13.35□□□□□ -0.27
THUMPD3-209ENST00000484006 FAM212AQ96EL1 285 aa13.35□□□□□ -0.27
THUMPD3-209ENST00000484006 ASTLQ6HA08 431 aaPredicted RBP13.34□□□□□ -0.27
THUMPD3-209ENST00000484006 ATMINO43313 823 aaPredicted RBP13.32□□□□□ -0.28
THUMPD3-209ENST00000484006 VASPP50552 380 aaPredicted RBP13.31□□□□□ -0.28
THUMPD3-209ENST00000484006 PELP1Q8IZL8 1130 aaKnown RBP13.31□□□□□ -0.28
THUMPD3-209ENST00000484006 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
THUMPD3-209ENST00000484006 SGIP1Q9BQI5 828 aa13.29□□□□□ -0.28
THUMPD3-209ENST00000484006 DCAF8Q5TAQ9 597 aa13.27□□□□□ -0.29
THUMPD3-209ENST00000484006 SLC39A7Q92504 469 aa13.27□□□□□ -0.29
THUMPD3-209ENST00000484006 C7P10643 843 aa13.25□□□□□ -0.29
THUMPD3-209ENST00000484006 PCDHB13Q9Y5F0 798 aa13.25□□□□□ -0.29
THUMPD3-209ENST00000484006 TIE1P35590 1138 aa13.24□□□□□ -0.29
THUMPD3-209ENST00000484006 ATN1P54259 1190 aaPredicted RBP13.23□□□□□ -0.29
THUMPD3-209ENST00000484006 METRNQ9UJH8 293 aa13.22□□□□□ -0.29
THUMPD3-209ENST00000484006 BMP2KQ9NSY1 1161 aaPredicted RBP13.21□□□□□ -0.29
THUMPD3-209ENST00000484006 TRPC6Q9Y210 931 aa13.21□□□□□ -0.29
THUMPD3-209ENST00000484006 POTEB2H3BUK9 544 aa13.17□□□□□ -0.3
THUMPD3-209ENST00000484006 GSE1Q14687 1217 aa13.15□□□□□ -0.3
THUMPD3-209ENST00000484006 IFNL1Q8IU54 200 aa13.15□□□□□ -0.3
THUMPD3-209ENST00000484006 TTLL13PA6NNM8 815 aa13.14□□□□□ -0.31
THUMPD3-209ENST00000484006 PYGBP11216 843 aa13.13□□□□□ -0.31
THUMPD3-209ENST00000484006 OTUD5Q96G74 571 aa13.11□□□□□ -0.31
THUMPD3-209ENST00000484006 IFNLR1Q8IU57 520 aaPredicted RBP13.08□□□□□ -0.32
THUMPD3-209ENST00000484006 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
THUMPD3-209ENST00000484006 SPOCK2Q92563 424 aa13.06□□□□□ -0.32
THUMPD3-209ENST00000484006 MAMSTRQ6ZN01 415 aa13.05□□□□□ -0.32
THUMPD3-209ENST00000484006 TMEM106CQ9BVX2 250 aa13.05□□□□□ -0.32
THUMPD3-209ENST00000484006 SEC24BO95487 1268 aa13.04□□□□□ -0.32
THUMPD3-209ENST00000484006 IER5LQ5T953 404 aa13.03□□□□□ -0.32
THUMPD3-209ENST00000484006 CHRM1P11229 460 aaPredicted RBP13.02□□□□□ -0.33
THUMPD3-209ENST00000484006 POTEFA5A3E0 1075 aa13.01□□□□□ -0.33
THUMPD3-209ENST00000484006 POTEJP0CG39 1038 aa13□□□□□ -0.33
THUMPD3-209ENST00000484006 PCDHB8Q9UN66 801 aa13□□□□□ -0.33
THUMPD3-209ENST00000484006 ZNF467Q7Z7K2 595 aaPredicted RBP12.99□□□□□ -0.33
THUMPD3-209ENST00000484006 SCUBE2Q9NQ36 999 aa12.97□□□□□ -0.33
THUMPD3-209ENST00000484006 CIZ1Q9ULV3 898 aaPredicted RBP12.97□□□□□ -0.33
THUMPD3-209ENST00000484006 COLQQ9Y215 455 aaPredicted RBP12.97□□□□□ -0.33
THUMPD3-209ENST00000484006 PLCG2P16885 1265 aa12.89□□□□□ -0.35
THUMPD3-209ENST00000484006 IRX5P78411 483 aaPredicted RBP12.86□□□□□ -0.35
THUMPD3-209ENST00000484006 PSEN1P49768 467 aa12.85□□□□□ -0.35
THUMPD3-209ENST00000484006 OCEL1Q9H607 264 aa12.85□□□□□ -0.35
THUMPD3-209ENST00000484006 GOLGA2Q08379 1002 aa12.84□□□□□ -0.35
THUMPD3-209ENST00000484006 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
THUMPD3-209ENST00000484006 PDAP1Q13442 181 aaKnown RBP12.82□□□□□ -0.36
THUMPD3-209ENST00000484006 MKRN3Q13064 507 aaKnown RBP12.81□□□□□ -0.36
THUMPD3-209ENST00000484006 FAM163AQ96GL9 167 aaPredicted RBP12.73□□□□□ -0.37
THUMPD3-209ENST00000484006 SLAIN1Q8ND83 568 aa12.71□□□□□ -0.37
THUMPD3-209ENST00000484006 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.71□□□□□ -0.37
THUMPD3-209ENST00000484006 POTEMA6NI47 508 aa12.7□□□□□ -0.38
THUMPD3-209ENST00000484006 POTEGQ6S5H5 508 aa12.68□□□□□ -0.38
THUMPD3-209ENST00000484006 L3MBTL3Q96JM7 780 aaPredicted RBP12.68□□□□□ -0.38
THUMPD3-209ENST00000484006 CABP2Q9NPB3 220 aa12.68□□□□□ -0.38
THUMPD3-209ENST00000484006 PDCD7Q8N8D1 485 aaKnown RBP12.67□□□□□ -0.38
THUMPD3-209ENST00000484006 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.67□□□□□ -0.38
THUMPD3-209ENST00000484006 RIOK3O14730 519 aaKnown RBP12.61□□□□□ -0.39
THUMPD3-209ENST00000484006 ILDR1Q86SU0 546 aaPredicted RBP12.61□□□□□ -0.39
THUMPD3-209ENST00000484006 LCE2DQ5TA82 110 aaPredicted RBP12.59□□□□□ -0.39
THUMPD3-209ENST00000484006 C3orf67Q6ZVT6 689 aa12.58□□□□□ -0.4
THUMPD3-209ENST00000484006 PCDH10Q9P2E7 1040 aa12.58□□□□□ -0.4
THUMPD3-209ENST00000484006 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
THUMPD3-209ENST00000484006 G3V3G9 751 aa12.55□□□□□ -0.4
THUMPD3-209ENST00000484006 SNPHO15079 494 aa12.55□□□□□ -0.4
THUMPD3-209ENST00000484006 RNF25Q96BH1 459 aaPredicted RBP12.55□□□□□ -0.4
THUMPD3-209ENST00000484006 DPY19L2Q6NUT2 758 aa12.54□□□□□ -0.4
THUMPD3-209ENST00000484006 EFCAB3Q8N7B9 438 aa12.54□□□□□ -0.4
THUMPD3-209ENST00000484006 TAOK2Q9UL54 1235 aa12.54□□□□□ -0.4
THUMPD3-209ENST00000484006 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.51□□□□□ -0.41
THUMPD3-209ENST00000484006 ZFP91Q96JP5 570 aaPredicted RBP12.51□□□□□ -0.41
THUMPD3-209ENST00000484006 ST18O60284 1047 aa12.5□□□□□ -0.41
THUMPD3-209ENST00000484006 PLSCR2Q9NRY7 297 aa12.5□□□□□ -0.41
THUMPD3-209ENST00000484006 BOLA1Q9Y3E2 137 aa12.5□□□□□ -0.41
THUMPD3-209ENST00000484006 SOX12O15370 315 aa12.49□□□□□ -0.41
THUMPD3-209ENST00000484006 ECM2O94769 699 aaPredicted RBP12.46□□□□□ -0.41
THUMPD3-209ENST00000484006 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
THUMPD3-209ENST00000484006 PKD2Q13563 968 aa12.39□□□□□ -0.43
THUMPD3-209ENST00000484006 BCL11BQ9C0K0 894 aaPredicted RBP12.39□□□□□ -0.43
THUMPD3-209ENST00000484006 PHF8Q9UPP1 1060 aa12.37□□□□□ -0.43
THUMPD3-209ENST00000484006 STK24Q9Y6E0 443 aa12.37□□□□□ -0.43
THUMPD3-209ENST00000484006 CDAN1Q8IWY9 1227 aa12.36□□□□□ -0.43
THUMPD3-209ENST00000484006 STK25O00506 426 aa12.35□□□□□ -0.43
THUMPD3-209ENST00000484006 NLRP6P59044 892 aa12.35□□□□□ -0.43
THUMPD3-209ENST00000484006 MS4A4AQ96JQ5 239 aa12.33□□□□□ -0.44
THUMPD3-209ENST00000484006 RGL2O15211 777 aa12.32□□□□□ -0.44
THUMPD3-209ENST00000484006 MICALL2Q8IY33 904 aa12.32□□□□□ -0.44
THUMPD3-209ENST00000484006 MARVELD3Q96A59 401 aa12.29□□□□□ -0.44
THUMPD3-209ENST00000484006 FBXO22Q8NEZ5 403 aa12.26□□□□□ -0.45
THUMPD3-209ENST00000484006 EMP3P54852 163 aa12.25□□□□□ -0.45
THUMPD3-209ENST00000484006 DOK7Q18PE1 504 aa12.25□□□□□ -0.45
THUMPD3-209ENST00000484006 ZNF710Q8N1W2 664 aa12.25□□□□□ -0.45
THUMPD3-209ENST00000484006 MFRPQ9BY79 579 aa12.24□□□□□ -0.45
THUMPD3-209ENST00000484006 NISCHQ9Y2I1 1504 aa12.24□□□□□ -0.45
THUMPD3-209ENST00000484006 HOXB3P14651 431 aaPredicted RBP12.23□□□□□ -0.45
THUMPD3-209ENST00000484006 RIMBP2O15034 1052 aa12.21□□□□□ -0.45
THUMPD3-209ENST00000484006 TMEM92Q6UXU6 159 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms