RNA–Protein interactions for RNA: ENST00000483672.1

USP34-214, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 365 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-214ENST00000483672 CCDC61Q9Y6R9 512 aa12.82□□□□□ -0.36
USP34-214ENST00000483672 METRNQ9UJH8 293 aa12.81□□□□□ -0.36
USP34-214ENST00000483672 POTEJP0CG39 1038 aa12.8□□□□□ -0.36
USP34-214ENST00000483672 PLSCR2Q9NRY7 297 aa12.78□□□□□ -0.36
USP34-214ENST00000483672 C7P10643 843 aa12.77□□□□□ -0.37
USP34-214ENST00000483672 SLC39A7Q92504 469 aa12.77□□□□□ -0.37
USP34-214ENST00000483672 KIF12Q96FN5 646 aa12.76□□□□□ -0.37
USP34-214ENST00000483672 ATN1P54259 1190 aaPredicted RBP12.74□□□□□ -0.37
USP34-214ENST00000483672 TRPC6Q9Y210 931 aa12.71□□□□□ -0.37
USP34-214ENST00000483672 POTEMA6NI47 508 aa12.7□□□□□ -0.38
USP34-214ENST00000483672 RASEFQ8IZ41 740 aa12.68□□□□□ -0.38
USP34-214ENST00000483672 MIER1Q8N108 512 aa12.68□□□□□ -0.38
USP34-214ENST00000483672 BMP2KQ9NSY1 1161 aaPredicted RBP12.68□□□□□ -0.38
USP34-214ENST00000483672 MAP3K13O43283 966 aa12.67□□□□□ -0.38
USP34-214ENST00000483672 POTEFA5A3E0 1075 aa12.66□□□□□ -0.38
USP34-214ENST00000483672 POTEGQ6S5H5 508 aa12.66□□□□□ -0.38
USP34-214ENST00000483672 PLEKHG5O94827 1062 aa12.61□□□□□ -0.39
USP34-214ENST00000483672 MAMSTRQ6ZN01 415 aa12.61□□□□□ -0.39
USP34-214ENST00000483672 TIE1P35590 1138 aa12.6□□□□□ -0.39
USP34-214ENST00000483672 LCE2DQ5TA82 110 aaPredicted RBP12.59□□□□□ -0.39
USP34-214ENST00000483672 TTLL13PA6NNM8 815 aa12.54□□□□□ -0.4
USP34-214ENST00000483672 SCUBE2Q9NQ36 999 aa12.54□□□□□ -0.4
USP34-214ENST00000483672 NUBP1P53384 320 aa12.53□□□□□ -0.4
USP34-214ENST00000483672 PLCD3Q8N3E9 789 aa12.53□□□□□ -0.4
USP34-214ENST00000483672 COLQQ9Y215 455 aaPredicted RBP12.53□□□□□ -0.4
USP34-214ENST00000483672 FAM163AQ96GL9 167 aaPredicted RBP12.5□□□□□ -0.41
USP34-214ENST00000483672 SGIP1Q9BQI5 828 aa12.49□□□□□ -0.41
USP34-214ENST00000483672 PCDH10Q9P2E7 1040 aa12.47□□□□□ -0.41
USP34-214ENST00000483672 PCDHB13Q9Y5F0 798 aa12.47□□□□□ -0.41
USP34-214ENST00000483672 TRIM35Q9UPQ4 493 aa12.45□□□□□ -0.42
USP34-214ENST00000483672 SEC24BO95487 1268 aa12.43□□□□□ -0.42
USP34-214ENST00000483672 IFNL1Q8IU54 200 aa12.43□□□□□ -0.42
USP34-214ENST00000483672 IER5LQ5T953 404 aa12.41□□□□□ -0.42
USP34-214ENST00000483672 ZBTB47Q9UFB7 747 aaPredicted RBP12.41□□□□□ -0.42
USP34-214ENST00000483672 FKBP8Q14318 412 aa12.37□□□□□ -0.43
USP34-214ENST00000483672 FAM212AQ96EL1 285 aa12.35□□□□□ -0.43
USP34-214ENST00000483672 TMEM106CQ9BVX2 250 aa12.34□□□□□ -0.43
USP34-214ENST00000483672 IRX5P78411 483 aaPredicted RBP12.28□□□□□ -0.44
USP34-214ENST00000483672 SLAIN1Q8ND83 568 aa12.26□□□□□ -0.45
USP34-214ENST00000483672 PYGBP11216 843 aa12.25□□□□□ -0.45
USP34-214ENST00000483672 DCAF8Q5TAQ9 597 aa12.25□□□□□ -0.45
USP34-214ENST00000483672 PLCG2P16885 1265 aa12.24□□□□□ -0.45
USP34-214ENST00000483672 ST18O60284 1047 aa12.21□□□□□ -0.45
USP34-214ENST00000483672 CDAN1Q8IWY9 1227 aa12.21□□□□□ -0.45
USP34-214ENST00000483672 PCDHB8Q9UN66 801 aa12.21□□□□□ -0.45
USP34-214ENST00000483672 OCEL1Q9H607 264 aa12.19□□□□□ -0.46
USP34-214ENST00000483672 FBXO3Q9UK99 471 aa12.13□□□□□ -0.47
USP34-214ENST00000483672 PDCD7Q8N8D1 485 aaKnown RBP12.06□□□□□ -0.48
USP34-214ENST00000483672 VASPP50552 380 aaPredicted RBP12.05□□□□□ -0.48
USP34-214ENST00000483672 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.05□□□□□ -0.48
USP34-214ENST00000483672 GSE1Q14687 1217 aa12.04□□□□□ -0.48
USP34-214ENST00000483672 KLHL34Q8N239 644 aa12.03□□□□□ -0.48
USP34-214ENST00000483672 CHRM1P11229 460 aaPredicted RBP12.02□□□□□ -0.49
USP34-214ENST00000483672 ZNF467Q7Z7K2 595 aaPredicted RBP12.02□□□□□ -0.49
USP34-214ENST00000483672 TMEM121BQ9BXQ6 578 aaPredicted RBP12.01□□□□□ -0.49
USP34-214ENST00000483672 SNPHO15079 494 aa12□□□□□ -0.49
USP34-214ENST00000483672 MARVELD3Q96A59 401 aa11.98□□□□□ -0.49
USP34-214ENST00000483672 PSEN1P49768 467 aa11.96□□□□□ -0.49
USP34-214ENST00000483672 MKRN3Q13064 507 aaKnown RBP11.96□□□□□ -0.49
USP34-214ENST00000483672 SPNS2Q8IVW8 549 aa11.94□□□□□ -0.5
USP34-214ENST00000483672 GOLGA2Q08379 1002 aa11.93□□□□□ -0.5
USP34-214ENST00000483672 ILDR1Q86SU0 546 aaPredicted RBP11.93□□□□□ -0.5
USP34-214ENST00000483672 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
USP34-214ENST00000483672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.93□□□□□ -0.59e-12■■■□□ 16
USP34-214ENST00000483672 MMRN1Q13201 1228 aa11.92□□□□□ -0.5
USP34-214ENST00000483672 C3orf67Q6ZVT6 689 aa11.91□□□□□ -0.5
USP34-214ENST00000483672 DPY19L2Q6NUT2 758 aa11.89□□□□□ -0.51
USP34-214ENST00000483672 POTEB3A0JP26 581 aa11.87□□□□□ -0.51
USP34-214ENST00000483672 POTEBQ6S5H4 581 aa11.87□□□□□ -0.51
USP34-214ENST00000483672 PDAP1Q13442 181 aaKnown RBP11.86□□□□□ -0.51
USP34-214ENST00000483672 IFNLR1Q8IU57 520 aaPredicted RBP11.86□□□□□ -0.51
USP34-214ENST00000483672 EMP3P54852 163 aa11.83□□□□□ -0.52
USP34-214ENST00000483672 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
USP34-214ENST00000483672 CABP2Q9NPB3 220 aa11.81□□□□□ -0.52
USP34-214ENST00000483672 CIZ1Q9ULV3 898 aaPredicted RBP11.8□□□□□ -0.52
USP34-214ENST00000483672 HS3ST6Q96QI5 342 aa11.79□□□□□ -0.52
USP34-214ENST00000483672 KRTAP3-3Q9BYR6 98 aa11.79□□□□□ -0.52
USP34-214ENST00000483672 KRTAP3-2Q9BYR7 98 aa11.79□□□□□ -0.52
USP34-214ENST00000483672 FAM205CA6NFA0 338 aa11.77□□□□□ -0.53
USP34-214ENST00000483672 HOXB3P14651 431 aaPredicted RBP11.76□□□□□ -0.53
USP34-214ENST00000483672 BOLA1Q9Y3E2 137 aa11.76□□□□□ -0.53
USP34-214ENST00000483672 G3V3G9 751 aa11.68□□□□□ -0.54
USP34-214ENST00000483672 EFCAB3Q8N7B9 438 aa11.67□□□□□ -0.54
USP34-214ENST00000483672 HOXB1P14653 301 aaPredicted RBP11.66□□□□□ -0.54
USP34-214ENST00000483672 TMEM92Q6UXU6 159 aa11.6□□□□□ -0.55
USP34-214ENST00000483672 ZNF710Q8N1W2 664 aa11.6□□□□□ -0.55
USP34-214ENST00000483672 DOK7Q18PE1 504 aa11.59□□□□□ -0.55
USP34-214ENST00000483672 TRIM41Q8WV44 630 aa11.59□□□□□ -0.55
USP34-214ENST00000483672 ERBB3P21860 1342 aa11.57□□□□□ -0.56
USP34-214ENST00000483672 MICALL2Q8IY33 904 aa11.56□□□□□ -0.56
USP34-214ENST00000483672 MS4A4AQ96JQ5 239 aa11.55□□□□□ -0.56
USP34-214ENST00000483672 RNF25Q96BH1 459 aaPredicted RBP11.54□□□□□ -0.56
USP34-214ENST00000483672 SOX12O15370 315 aa11.51□□□□□ -0.57
USP34-214ENST00000483672 VARS2Q5ST30 1063 aaKnown RBP11.5□□□□□ -0.57
USP34-214ENST00000483672 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.49□□□□□ -0.57
USP34-214ENST00000483672 RIOK3O14730 519 aaKnown RBP11.49□□□□□ -0.57
USP34-214ENST00000483672 RIMBP2O15034 1052 aa11.49□□□□□ -0.57
USP34-214ENST00000483672 ZFP91Q96JP5 570 aaPredicted RBP11.49□□□□□ -0.57
USP34-214ENST00000483672 GPR153Q6NV75 609 aa11.48□□□□□ -0.57
USP34-214ENST00000483672 PHF8Q9UPP1 1060 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms