RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 PLCD3Q8N3E9 789 aa10.12□□□□□ -0.79
LRCH3-217ENST00000483442 PLEKHG5O94827 1062 aa10.08□□□□□ -0.8
LRCH3-217ENST00000483442 KIF12Q96FN5 646 aa10.08□□□□□ -0.8
LRCH3-217ENST00000483442 NUBP1P53384 320 aa10.07□□□□□ -0.8
LRCH3-217ENST00000483442 TRPC6Q9Y210 931 aa10.06□□□□□ -0.8
LRCH3-217ENST00000483442 POTEB2H3BUK9 544 aa10.05□□□□□ -0.8
LRCH3-217ENST00000483442 MAP3K13O43283 966 aa10.04□□□□□ -0.8
LRCH3-217ENST00000483442 ATMINO43313 823 aaPredicted RBP10.03□□□□□ -0.8
LRCH3-217ENST00000483442 ASTLQ6HA08 431 aaPredicted RBP10.02□□□□□ -0.81
LRCH3-217ENST00000483442 ATN1P54259 1190 aaPredicted RBP9.98□□□□□ -0.81
LRCH3-217ENST00000483442 BMP2KQ9NSY1 1161 aaPredicted RBP9.96□□□□□ -0.82
LRCH3-217ENST00000483442 ZBTB47Q9UFB7 747 aaPredicted RBP9.96□□□□□ -0.82
LRCH3-217ENST00000483442 FBXO3Q9UK99 471 aa9.96□□□□□ -0.82
LRCH3-217ENST00000483442 OTUD5Q96G74 571 aa9.94□□□□□ -0.82
LRCH3-217ENST00000483442 POTEJP0CG39 1038 aa9.93□□□□□ -0.82
LRCH3-217ENST00000483442 VASPP50552 380 aaPredicted RBP9.93□□□□□ -0.82
LRCH3-217ENST00000483442 METRNQ9UJH8 293 aa9.93□□□□□ -0.82
LRCH3-217ENST00000483442 POTEFA5A3E0 1075 aa9.91□□□□□ -0.82
LRCH3-217ENST00000483442 IFNL1Q8IU54 200 aa9.9□□□□□ -0.82
LRCH3-217ENST00000483442 FAM212AQ96EL1 285 aa9.9□□□□□ -0.82
LRCH3-217ENST00000483442 PCDHB13Q9Y5F0 798 aa9.9□□□□□ -0.82
LRCH3-217ENST00000483442 SLC39A7Q92504 469 aa9.89□□□□□ -0.83
LRCH3-217ENST00000483442 TTLL13PA6NNM8 815 aa9.88□□□□□ -0.83
LRCH3-217ENST00000483442 C7P10643 843 aa9.88□□□□□ -0.83
LRCH3-217ENST00000483442 TIE1P35590 1138 aa9.88□□□□□ -0.83
LRCH3-217ENST00000483442 DCAF8Q5TAQ9 597 aa9.87□□□□□ -0.83
LRCH3-217ENST00000483442 PYGBP11216 843 aa9.86□□□□□ -0.83
LRCH3-217ENST00000483442 SGIP1Q9BQI5 828 aa9.85□□□□□ -0.83
LRCH3-217ENST00000483442 KLHL34Q8N239 644 aa9.84□□□□□ -0.83
LRCH3-217ENST00000483442 IFNLR1Q8IU57 520 aaPredicted RBP9.83□□□□□ -0.84
LRCH3-217ENST00000483442 COLQQ9Y215 455 aaPredicted RBP9.83□□□□□ -0.84
LRCH3-217ENST00000483442 TRIM35Q9UPQ4 493 aa9.81□□□□□ -0.84
LRCH3-217ENST00000483442 PCDHB8Q9UN66 801 aa9.8□□□□□ -0.84
LRCH3-217ENST00000483442 TMEM106CQ9BVX2 250 aa9.78□□□□□ -0.84
LRCH3-217ENST00000483442 GSE1Q14687 1217 aa9.72□□□□□ -0.85
LRCH3-217ENST00000483442 SEC24BO95487 1268 aa9.7□□□□□ -0.86
LRCH3-217ENST00000483442 IER5LQ5T953 404 aa9.7□□□□□ -0.86
LRCH3-217ENST00000483442 SPOCK2Q92563 424 aa9.7□□□□□ -0.86
LRCH3-217ENST00000483442 CHRM1P11229 460 aaPredicted RBP9.68□□□□□ -0.86
LRCH3-217ENST00000483442 IRX5P78411 483 aaPredicted RBP9.68□□□□□ -0.86
LRCH3-217ENST00000483442 MAMSTRQ6ZN01 415 aa9.67□□□□□ -0.86
LRCH3-217ENST00000483442 LCE2DQ5TA82 110 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-217ENST00000483442 CIZ1Q9ULV3 898 aaPredicted RBP9.65□□□□□ -0.86
LRCH3-217ENST00000483442 SCUBE2Q9NQ36 999 aa9.64□□□□□ -0.87
LRCH3-217ENST00000483442 ZNF467Q7Z7K2 595 aaPredicted RBP9.62□□□□□ -0.87
LRCH3-217ENST00000483442 PLCG2P16885 1265 aa9.6□□□□□ -0.87
LRCH3-217ENST00000483442 PSEN1P49768 467 aa9.6□□□□□ -0.87
LRCH3-217ENST00000483442 POTEMA6NI47 508 aa9.58□□□□□ -0.88
LRCH3-217ENST00000483442 OCEL1Q9H607 264 aa9.58□□□□□ -0.88
LRCH3-217ENST00000483442 POTEGQ6S5H5 508 aa9.57□□□□□ -0.88
LRCH3-217ENST00000483442 FAM163AQ96GL9 167 aaPredicted RBP9.57□□□□□ -0.88
LRCH3-217ENST00000483442 PDCD7Q8N8D1 485 aaKnown RBP9.56□□□□□ -0.88
LRCH3-217ENST00000483442 PDAP1Q13442 181 aaKnown RBP9.53□□□□□ -0.88
LRCH3-217ENST00000483442 SLAIN1Q8ND83 568 aa9.52□□□□□ -0.89
LRCH3-217ENST00000483442 MKRN3Q13064 507 aaKnown RBP9.5□□□□□ -0.89
LRCH3-217ENST00000483442 DPY19L2Q6NUT2 758 aa9.5□□□□□ -0.89
LRCH3-217ENST00000483442 ILDR1Q86SU0 546 aaPredicted RBP9.49□□□□□ -0.89
LRCH3-217ENST00000483442 RNF25Q96BH1 459 aaPredicted RBP9.49□□□□□ -0.89
LRCH3-217ENST00000483442 CABP2Q9NPB3 220 aa9.49□□□□□ -0.89
LRCH3-217ENST00000483442 GOLGA2Q08379 1002 aa9.48□□□□□ -0.89
LRCH3-217ENST00000483442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.48□□□□□ -0.89
LRCH3-217ENST00000483442 PLSCR2Q9NRY7 297 aa9.44□□□□□ -0.9
LRCH3-217ENST00000483442 ST18O60284 1047 aa9.43□□□□□ -0.9
LRCH3-217ENST00000483442 TRIM41Q8WV44 630 aa9.42□□□□□ -0.9
LRCH3-217ENST00000483442 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.42□□□□□ -0.9
LRCH3-217ENST00000483442 EFCAB3Q8N7B9 438 aa9.41□□□□□ -0.9
LRCH3-217ENST00000483442 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.38□□□□□ -0.91
LRCH3-217ENST00000483442 RIOK3O14730 519 aaKnown RBP9.38□□□□□ -0.91
LRCH3-217ENST00000483442 L3MBTL3Q96JM7 780 aaPredicted RBP9.38□□□□□ -0.91
LRCH3-217ENST00000483442 ZFP91Q96JP5 570 aaPredicted RBP9.38□□□□□ -0.91
LRCH3-217ENST00000483442 C3orf67Q6ZVT6 689 aa9.35□□□□□ -0.91
LRCH3-217ENST00000483442 BOLA1Q9Y3E2 137 aa9.33□□□□□ -0.92
LRCH3-217ENST00000483442 VGFO15240 615 aaPredicted RBP9.32□□□□□ -0.92
LRCH3-217ENST00000483442 MS4A4AQ96JQ5 239 aa9.32□□□□□ -0.92
LRCH3-217ENST00000483442 PKD2Q13563 968 aa9.31□□□□□ -0.92
LRCH3-217ENST00000483442 PCDH10Q9P2E7 1040 aa9.31□□□□□ -0.92
LRCH3-217ENST00000483442 CDAN1Q8IWY9 1227 aa9.3□□□□□ -0.92
LRCH3-217ENST00000483442 MARVELD3Q96A59 401 aa9.3□□□□□ -0.92
LRCH3-217ENST00000483442 TMEM121BQ9BXQ6 578 aaPredicted RBP9.3□□□□□ -0.92
LRCH3-217ENST00000483442 PHF8Q9UPP1 1060 aa9.3□□□□□ -0.92
LRCH3-217ENST00000483442 SNPHO15079 494 aa9.27□□□□□ -0.93
LRCH3-217ENST00000483442 ECM2O94769 699 aaPredicted RBP9.27□□□□□ -0.93
LRCH3-217ENST00000483442 RGL2O15211 777 aa9.26□□□□□ -0.93
LRCH3-217ENST00000483442 TMEM92Q6UXU6 159 aa9.26□□□□□ -0.93
LRCH3-217ENST00000483442 BCL11BQ9C0K0 894 aaPredicted RBP9.26□□□□□ -0.93
LRCH3-217ENST00000483442 SOX12O15370 315 aa9.25□□□□□ -0.93
LRCH3-217ENST00000483442 HOXB3P14651 431 aaPredicted RBP9.25□□□□□ -0.93
LRCH3-217ENST00000483442 POTEB3A0JP26 581 aa9.24□□□□□ -0.93
LRCH3-217ENST00000483442 POTEBQ6S5H4 581 aa9.24□□□□□ -0.93
LRCH3-217ENST00000483442 MICALL2Q8IY33 904 aa9.24□□□□□ -0.93
LRCH3-217ENST00000483442 G3V3G9 751 aa9.23□□□□□ -0.93
LRCH3-217ENST00000483442 FBXO22Q8NEZ5 403 aa9.22□□□□□ -0.93
LRCH3-217ENST00000483442 STK24Q9Y6E0 443 aa9.22□□□□□ -0.93
LRCH3-217ENST00000483442 MFRPQ9BY79 579 aa9.2□□□□□ -0.94
LRCH3-217ENST00000483442 STK25O00506 426 aa9.19□□□□□ -0.94
LRCH3-217ENST00000483442 EMP3P54852 163 aa9.17□□□□□ -0.94
LRCH3-217ENST00000483442 NLRP6P59044 892 aa9.15□□□□□ -0.94
LRCH3-217ENST00000483442 FAM205CA6NFA0 338 aa9.14□□□□□ -0.95
LRCH3-217ENST00000483442 HS3ST6Q96QI5 342 aa9.14□□□□□ -0.95
LRCH3-217ENST00000483442 TAOK2Q9UL54 1235 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms