RNA–Protein interactions for RNA: ENST00000483418.1

NEB-212, Transcript of nebulin, humanhuman

TSL 3

Gene NEB, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-212ENST00000483418 PAK3O75914 559 aaPredicted RBP12.03□□□□□ -0.48
NEB-212ENST00000483418 GALR2O43603 387 aaPredicted RBP12□□□□□ -0.49
NEB-212ENST00000483418 PHF12Q96QT6 1004 aa12□□□□□ -0.49
NEB-212ENST00000483418 SPOCK2Q92563 424 aa11.96□□□□□ -0.49
NEB-212ENST00000483418 CCDC61Q9Y6R9 512 aa11.96□□□□□ -0.49
NEB-212ENST00000483418 FAM212AQ96EL1 285 aa11.94□□□□□ -0.5
NEB-212ENST00000483418 LHX8Q68G74 356 aa11.93□□□□□ -0.5
NEB-212ENST00000483418 DCAF8Q5TAQ9 597 aa11.92□□□□□ -0.5
NEB-212ENST00000483418 KIF12Q96FN5 646 aa11.86□□□□□ -0.51
NEB-212ENST00000483418 DCBLD2Q96PD2 775 aa11.86□□□□□ -0.51
NEB-212ENST00000483418 MS4A3Q96HJ5 214 aa11.85□□□□□ -0.51
NEB-212ENST00000483418 GSE1Q14687 1217 aa11.83□□□□□ -0.52
NEB-212ENST00000483418 CIZ1Q9ULV3 898 aaPredicted RBP11.83□□□□□ -0.52
NEB-212ENST00000483418 MAP3K13O43283 966 aa11.82□□□□□ -0.52
NEB-212ENST00000483418 PYGBP11216 843 aa11.82□□□□□ -0.52
NEB-212ENST00000483418 PELP1Q8IZL8 1130 aaKnown RBP11.82□□□□□ -0.52
NEB-212ENST00000483418 ASTLQ6HA08 431 aaPredicted RBP11.77□□□□□ -0.53
NEB-212ENST00000483418 POTEB2H3BUK9 544 aa11.76□□□□□ -0.53
NEB-212ENST00000483418 PCDHB13Q9Y5F0 798 aa11.75□□□□□ -0.53
NEB-212ENST00000483418 TRPC6Q9Y210 931 aa11.74□□□□□ -0.53
NEB-212ENST00000483418 ATMINO43313 823 aaPredicted RBP11.73□□□□□ -0.53
NEB-212ENST00000483418 IFNL1Q8IU54 200 aa11.72□□□□□ -0.53
NEB-212ENST00000483418 SGIP1Q9BQI5 828 aa11.7□□□□□ -0.54
NEB-212ENST00000483418 CHRM1P11229 460 aaPredicted RBP11.69□□□□□ -0.54
NEB-212ENST00000483418 PCDHB8Q9UN66 801 aa11.68□□□□□ -0.54
NEB-212ENST00000483418 ATN1P54259 1190 aaPredicted RBP11.65□□□□□ -0.54
NEB-212ENST00000483418 OTUD5Q96G74 571 aa11.65□□□□□ -0.54
NEB-212ENST00000483418 BMP2KQ9NSY1 1161 aaPredicted RBP11.65□□□□□ -0.54
NEB-212ENST00000483418 POTEJP0CG39 1038 aa11.64□□□□□ -0.55
NEB-212ENST00000483418 PKD2Q13563 968 aa11.64□□□□□ -0.55
NEB-212ENST00000483418 TRIM41Q8WV44 630 aa11.62□□□□□ -0.55
NEB-212ENST00000483418 METRNQ9UJH8 293 aa11.62□□□□□ -0.55
NEB-212ENST00000483418 POTEFA5A3E0 1075 aa11.61□□□□□ -0.55
NEB-212ENST00000483418 TIE1P35590 1138 aa11.6□□□□□ -0.55
NEB-212ENST00000483418 ZNF467Q7Z7K2 595 aaPredicted RBP11.6□□□□□ -0.55
NEB-212ENST00000483418 TTLL13PA6NNM8 815 aa11.59□□□□□ -0.55
NEB-212ENST00000483418 RNF25Q96BH1 459 aaPredicted RBP11.59□□□□□ -0.55
NEB-212ENST00000483418 SLC39A7Q92504 469 aa11.58□□□□□ -0.56
NEB-212ENST00000483418 ECM2O94769 699 aaPredicted RBP11.57□□□□□ -0.56
NEB-212ENST00000483418 C7P10643 843 aa11.57□□□□□ -0.56
NEB-212ENST00000483418 TMEM106CQ9BVX2 250 aa11.56□□□□□ -0.56
NEB-212ENST00000483418 PSEN1P49768 467 aa11.52□□□□□ -0.57
NEB-212ENST00000483418 RGL2O15211 777 aa11.51□□□□□ -0.57
NEB-212ENST00000483418 TRIM35Q9UPQ4 493 aa11.51□□□□□ -0.57
NEB-212ENST00000483418 RIOK3O14730 519 aaKnown RBP11.5□□□□□ -0.57
NEB-212ENST00000483418 PDAP1Q13442 181 aaKnown RBP11.5□□□□□ -0.57
NEB-212ENST00000483418 COLQQ9Y215 455 aaPredicted RBP11.47□□□□□ -0.57
NEB-212ENST00000483418 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.43□□□□□ -0.58
NEB-212ENST00000483418 VGFO15240 615 aaPredicted RBP11.43□□□□□ -0.58
NEB-212ENST00000483418 ZFP91Q96JP5 570 aaPredicted RBP11.43□□□□□ -0.58
NEB-212ENST00000483418 IER5LQ5T953 404 aa11.4□□□□□ -0.58
NEB-212ENST00000483418 CABP2Q9NPB3 220 aa11.39□□□□□ -0.59
NEB-212ENST00000483418 RTN4Q9NQC3 1192 aaKnown RBP11.37□□□□□ -0.59
NEB-212ENST00000483418 LCE2DQ5TA82 110 aaPredicted RBP11.36□□□□□ -0.59
NEB-212ENST00000483418 GOLGA2Q08379 1002 aa11.35□□□□□ -0.59
NEB-212ENST00000483418 IRX5P78411 483 aaPredicted RBP11.34□□□□□ -0.59
NEB-212ENST00000483418 SEC24BO95487 1268 aa11.33□□□□□ -0.6
NEB-212ENST00000483418 MKRN3Q13064 507 aaKnown RBP11.33□□□□□ -0.6
NEB-212ENST00000483418 MAMSTRQ6ZN01 415 aa11.33□□□□□ -0.6
NEB-212ENST00000483418 BCL11BQ9C0K0 894 aaPredicted RBP11.33□□□□□ -0.6
NEB-212ENST00000483418 AMER1Q5JTC6 1135 aaPredicted RBP11.32□□□□□ -0.6
NEB-212ENST00000483418 EFCAB3Q8N7B9 438 aa11.32□□□□□ -0.6
NEB-212ENST00000483418 TAOK2Q9UL54 1235 aa11.32□□□□□ -0.6
NEB-212ENST00000483418 STK25O00506 426 aa11.31□□□□□ -0.6
NEB-212ENST00000483418 STK24Q9Y6E0 443 aa11.31□□□□□ -0.6
NEB-212ENST00000483418 PLCG2P16885 1265 aa11.3□□□□□ -0.6
NEB-212ENST00000483418 OCEL1Q9H607 264 aa11.28□□□□□ -0.6
NEB-212ENST00000483418 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.28□□□□□ -0.6
NEB-212ENST00000483418 PDCD7Q8N8D1 485 aaKnown RBP11.27□□□□□ -0.61
NEB-212ENST00000483418 SCUBE2Q9NQ36 999 aa11.27□□□□□ -0.61
NEB-212ENST00000483418 ILDR1Q86SU0 546 aaPredicted RBP11.24□□□□□ -0.61
NEB-212ENST00000483418 DCAF8L2P0C7V8 631 aa11.23□□□□□ -0.61
NEB-212ENST00000483418 CHGAP10645 457 aaKnown RBP11.23□□□□□ -0.61
NEB-212ENST00000483418 DPY19L2Q6NUT2 758 aa11.22□□□□□ -0.61
NEB-212ENST00000483418 HS6ST3Q8IZP7 471 aa11.22□□□□□ -0.61
NEB-212ENST00000483418 POTEMA6NI47 508 aa11.21□□□□□ -0.61
NEB-212ENST00000483418 PHF8Q9UPP1 1060 aa11.21□□□□□ -0.61
NEB-212ENST00000483418 SOX12O15370 315 aa11.19□□□□□ -0.62
NEB-212ENST00000483418 POTEGQ6S5H5 508 aa11.19□□□□□ -0.62
NEB-212ENST00000483418 MS4A4AQ96JQ5 239 aa11.18□□□□□ -0.62
NEB-212ENST00000483418 MFRPQ9BY79 579 aa11.17□□□□□ -0.62
NEB-212ENST00000483418 FBXO22Q8NEZ5 403 aa11.15□□□□□ -0.62
NEB-212ENST00000483418 NLRP6P59044 892 aa11.12□□□□□ -0.63
NEB-212ENST00000483418 NKX1-1Q15270 411 aaPredicted RBP11.11□□□□□ -0.63
NEB-212ENST00000483418 FAM163AQ96GL9 167 aaPredicted RBP11.1□□□□□ -0.63
NEB-212ENST00000483418 L3MBTL3Q96JM7 780 aaPredicted RBP11.1□□□□□ -0.63
NEB-212ENST00000483418 SLAIN1Q8ND83 568 aa11.09□□□□□ -0.63
NEB-212ENST00000483418 DNAJC5Q9H3Z4 198 aa11.08□□□□□ -0.64
NEB-212ENST00000483418 BOLA1Q9Y3E2 137 aa11.08□□□□□ -0.64
NEB-212ENST00000483418 PPP1R37O75864 691 aa11.03□□□□□ -0.64
NEB-212ENST00000483418 C3orf67Q6ZVT6 689 aa11.03□□□□□ -0.64
NEB-212ENST00000483418 MICALL2Q8IY33 904 aa11.03□□□□□ -0.64
NEB-212ENST00000483418 TMEM121BQ9BXQ6 578 aaPredicted RBP11.03□□□□□ -0.64
NEB-212ENST00000483418 G3V3G9 751 aa11.02□□□□□ -0.65
NEB-212ENST00000483418 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.02□□□□□ -0.65
NEB-212ENST00000483418 ST18O60284 1047 aa11.01□□□□□ -0.65
NEB-212ENST00000483418 PLSCR2Q9NRY7 297 aa10.98□□□□□ -0.65
NEB-212ENST00000483418 PCDH10Q9P2E7 1040 aa10.98□□□□□ -0.65
NEB-212ENST00000483418 GTPBP6O43824 516 aaPredicted RBP10.96□□□□□ -0.65
NEB-212ENST00000483418 TMEM92Q6UXU6 159 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms