RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 VASPP50552 380 aaPredicted RBP8.76□□□□□ -1.01
LTN1-205ENST00000483326 CCDC61Q9Y6R9 512 aa8.76□□□□□ -1.01
LTN1-205ENST00000483326 NUBP1P53384 320 aa8.74□□□□□ -1.01
LTN1-205ENST00000483326 POTEIP0CG38 1075 aa8.73□□□□□ -1.01
LTN1-205ENST00000483326 FAM212AQ96EL1 285 aa8.71□□□□□ -1.01
LTN1-205ENST00000483326 KLHL34Q8N239 644 aa8.71□□□□□ -1.02
LTN1-205ENST00000483326 KIF12Q96FN5 646 aa8.7□□□□□ -1.02
LTN1-205ENST00000483326 MS4A3Q96HJ5 214 aa8.7□□□□□ -1.02
LTN1-205ENST00000483326 AMER1Q5JTC6 1135 aaPredicted RBP8.68□□□□□ -1.02
LTN1-205ENST00000483326 DCAF8Q5TAQ9 597 aa8.66□□□□□ -1.02
LTN1-205ENST00000483326 MAP3K13O43283 966 aa8.65□□□□□ -1.02
LTN1-205ENST00000483326 LHX8Q68G74 356 aa8.65□□□□□ -1.02
LTN1-205ENST00000483326 SGIP1Q9BQI5 828 aa8.65□□□□□ -1.02
LTN1-205ENST00000483326 RTN4Q9NQC3 1192 aaKnown RBP8.65□□□□□ -1.02
LTN1-205ENST00000483326 ASTLQ6HA08 431 aaPredicted RBP8.63□□□□□ -1.03
LTN1-205ENST00000483326 GSE1Q14687 1217 aa8.61□□□□□ -1.03
LTN1-205ENST00000483326 ATMINO43313 823 aaPredicted RBP8.61□□□□□ -1.03
LTN1-205ENST00000483326 PCDHB13Q9Y5F0 798 aa8.61□□□□□ -1.03
LTN1-205ENST00000483326 TIE1P35590 1138 aa8.59□□□□□ -1.03
LTN1-205ENST00000483326 SPOCK2Q92563 424 aa8.59□□□□□ -1.03
LTN1-205ENST00000483326 IFNLR1Q8IU57 520 aaPredicted RBP8.58□□□□□ -1.04
LTN1-205ENST00000483326 SLC39A7Q92504 469 aa8.58□□□□□ -1.04
LTN1-205ENST00000483326 C7P10643 843 aa8.56□□□□□ -1.04
LTN1-205ENST00000483326 PELP1Q8IZL8 1130 aaKnown RBP8.56□□□□□ -1.04
LTN1-205ENST00000483326 BMP2KQ9NSY1 1161 aaPredicted RBP8.56□□□□□ -1.04
LTN1-205ENST00000483326 PYGBP11216 843 aa8.55□□□□□ -1.04
LTN1-205ENST00000483326 ATN1P54259 1190 aaPredicted RBP8.54□□□□□ -1.04
LTN1-205ENST00000483326 IFNL1Q8IU54 200 aa8.54□□□□□ -1.04
LTN1-205ENST00000483326 TRPC6Q9Y210 931 aa8.54□□□□□ -1.04
LTN1-205ENST00000483326 METRNQ9UJH8 293 aa8.53□□□□□ -1.04
LTN1-205ENST00000483326 CHRM1P11229 460 aaPredicted RBP8.52□□□□□ -1.05
LTN1-205ENST00000483326 TTLL13PA6NNM8 815 aa8.51□□□□□ -1.05
LTN1-205ENST00000483326 CIZ1Q9ULV3 898 aaPredicted RBP8.5□□□□□ -1.05
LTN1-205ENST00000483326 ZNF467Q7Z7K2 595 aaPredicted RBP8.48□□□□□ -1.05
LTN1-205ENST00000483326 TMEM106CQ9BVX2 250 aa8.48□□□□□ -1.05
LTN1-205ENST00000483326 IER5LQ5T953 404 aa8.46□□□□□ -1.05
LTN1-205ENST00000483326 TRIM35Q9UPQ4 493 aa8.46□□□□□ -1.05
LTN1-205ENST00000483326 PCDHB8Q9UN66 801 aa8.45□□□□□ -1.06
LTN1-205ENST00000483326 TRIM41Q8WV44 630 aa8.45□□□□□ -1.06
LTN1-205ENST00000483326 POTEB2H3BUK9 544 aa8.44□□□□□ -1.06
LTN1-205ENST00000483326 SEC24BO95487 1268 aa8.43□□□□□ -1.06
LTN1-205ENST00000483326 MAMSTRQ6ZN01 415 aa8.43□□□□□ -1.06
LTN1-205ENST00000483326 OTUD5Q96G74 571 aa8.4□□□□□ -1.06
LTN1-205ENST00000483326 POTEFA5A3E0 1075 aa8.38□□□□□ -1.07
LTN1-205ENST00000483326 PSEN1P49768 467 aa8.38□□□□□ -1.07
LTN1-205ENST00000483326 PDAP1Q13442 181 aaKnown RBP8.38□□□□□ -1.07
LTN1-205ENST00000483326 PLCG2P16885 1265 aa8.37□□□□□ -1.07
LTN1-205ENST00000483326 SCUBE2Q9NQ36 999 aa8.37□□□□□ -1.07
LTN1-205ENST00000483326 COLQQ9Y215 455 aaPredicted RBP8.37□□□□□ -1.07
LTN1-205ENST00000483326 GOLGA2Q08379 1002 aa8.36□□□□□ -1.07
LTN1-205ENST00000483326 POTEJP0CG39 1038 aa8.35□□□□□ -1.07
LTN1-205ENST00000483326 OCEL1Q9H607 264 aa8.34□□□□□ -1.07
LTN1-205ENST00000483326 IRX5P78411 483 aaPredicted RBP8.33□□□□□ -1.08
LTN1-205ENST00000483326 MKRN3Q13064 507 aaKnown RBP8.33□□□□□ -1.08
LTN1-205ENST00000483326 RIOK3O14730 519 aaKnown RBP8.27□□□□□ -1.08
LTN1-205ENST00000483326 CABP2Q9NPB3 220 aa8.26□□□□□ -1.09
LTN1-205ENST00000483326 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.26□□□□□ -1.094e-6■■□□□ 11.9
LTN1-205ENST00000483326 TAOK2Q9UL54 1235 aa8.26□□□□□ -1.09
LTN1-205ENST00000483326 VGFO15240 615 aaPredicted RBP8.24□□□□□ -1.09
LTN1-205ENST00000483326 L3MBTL3Q96JM7 780 aaPredicted RBP8.24□□□□□ -1.09
LTN1-205ENST00000483326 PDCD7Q8N8D1 485 aaKnown RBP8.22□□□□□ -1.09
LTN1-205ENST00000483326 ECM2O94769 699 aaPredicted RBP8.22□□□□□ -1.09
LTN1-205ENST00000483326 RNF25Q96BH1 459 aaPredicted RBP8.22□□□□□ -1.09
LTN1-205ENST00000483326 ILDR1Q86SU0 546 aaPredicted RBP8.2□□□□□ -1.1
LTN1-205ENST00000483326 SLAIN1Q8ND83 568 aa8.2□□□□□ -1.1
LTN1-205ENST00000483326 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.2□□□□□ -1.1
LTN1-205ENST00000483326 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.19□□□□□ -1.1
LTN1-205ENST00000483326 ZFP91Q96JP5 570 aaPredicted RBP8.19□□□□□ -1.1
LTN1-205ENST00000483326 EFCAB3Q8N7B9 438 aa8.17□□□□□ -1.1
LTN1-205ENST00000483326 G3V3G9 751 aa8.17□□□□□ -1.1
LTN1-205ENST00000483326 PKD2Q13563 968 aa8.17□□□□□ -1.1
LTN1-205ENST00000483326 C3orf67Q6ZVT6 689 aa8.17□□□□□ -1.1
LTN1-205ENST00000483326 SOX12O15370 315 aa8.16□□□□□ -1.1
LTN1-205ENST00000483326 FAM163AQ96GL9 167 aaPredicted RBP8.16□□□□□ -1.1
LTN1-205ENST00000483326 DPY19L2Q6NUT2 758 aa8.13□□□□□ -1.11
LTN1-205ENST00000483326 PLSCR2Q9NRY7 297 aa8.13□□□□□ -1.11
LTN1-205ENST00000483326 BOLA1Q9Y3E2 137 aa8.13□□□□□ -1.11
LTN1-205ENST00000483326 SNPHO15079 494 aa8.12□□□□□ -1.11
LTN1-205ENST00000483326 BCL11BQ9C0K0 894 aaPredicted RBP8.12□□□□□ -1.11
LTN1-205ENST00000483326 POTEMA6NI47 508 aa8.11□□□□□ -1.11
LTN1-205ENST00000483326 STK24Q9Y6E0 443 aa8.11□□□□□ -1.11
LTN1-205ENST00000483326 RGL2O15211 777 aa8.1□□□□□ -1.11
LTN1-205ENST00000483326 POTEGQ6S5H5 508 aa8.1□□□□□ -1.11
LTN1-205ENST00000483326 STK25O00506 426 aa8.1□□□□□ -1.11
LTN1-205ENST00000483326 NLRP6P59044 892 aa8.08□□□□□ -1.12
LTN1-205ENST00000483326 LCE2DQ5TA82 110 aaPredicted RBP8.07□□□□□ -1.12
LTN1-205ENST00000483326 PHF8Q9UPP1 1060 aa8.07□□□□□ -1.12
LTN1-205ENST00000483326 TMEM121BQ9BXQ6 578 aaPredicted RBP8.07□□□□□ -1.12
LTN1-205ENST00000483326 PCDH10Q9P2E7 1040 aa8.05□□□□□ -1.12
LTN1-205ENST00000483326 ST18O60284 1047 aa8.04□□□□□ -1.12
LTN1-205ENST00000483326 MS4A4AQ96JQ5 239 aa8.04□□□□□ -1.12
LTN1-205ENST00000483326 MICALL2Q8IY33 904 aa8.02□□□□□ -1.13
LTN1-205ENST00000483326 FBXO22Q8NEZ5 403 aa8.02□□□□□ -1.13
LTN1-205ENST00000483326 MFRPQ9BY79 579 aa8.01□□□□□ -1.13
LTN1-205ENST00000483326 HS6ST3Q8IZP7 471 aa7.97□□□□□ -1.13
LTN1-205ENST00000483326 DOK7Q18PE1 504 aa7.95□□□□□ -1.14
LTN1-205ENST00000483326 BCANQ96GW7 911 aa7.94□□□□□ -1.14
LTN1-205ENST00000483326 CHGAP10645 457 aaKnown RBP7.94□□□□□ -1.14
LTN1-205ENST00000483326 PLCB2Q00722 1185 aa7.94□□□□□ -1.14
LTN1-205ENST00000483326 ZNF710Q8N1W2 664 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms