RNA–Protein interactions for RNA: ENST00000483176.2

CLTC-207, Transcript of clathrin heavy chain, humanhuman

TSL 3

Gene CLTC, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-207ENST00000483176 HS6ST3Q8IZP7 471 aa10.86□□□□□ -0.67
CLTC-207ENST00000483176 TAOK2Q9UL54 1235 aa10.84□□□□□ -0.67
CLTC-207ENST00000483176 CLEC11AQ9Y240 323 aa10.84□□□□□ -0.67
CLTC-207ENST00000483176 PRR29P0C7W0 189 aa10.83□□□□□ -0.68
CLTC-207ENST00000483176 RNF25Q96BH1 459 aaPredicted RBP10.83□□□□□ -0.68
CLTC-207ENST00000483176 PRKCSHP14314 528 aaPredicted RBP10.8□□□□□ -0.68
CLTC-207ENST00000483176 CREBZFQ9NS37 354 aa10.8□□□□□ -0.68
CLTC-207ENST00000483176 RIOK3O14730 519 aaKnown RBP10.79□□□□□ -0.68
CLTC-207ENST00000483176 FAM212AQ96EL1 285 aa10.79□□□□□ -0.68
CLTC-207ENST00000483176 REM2Q8IYK8 340 aaPredicted RBP10.78□□□□□ -0.68
CLTC-207ENST00000483176 DNAJC5Q9H3Z4 198 aa10.78□□□□□ -0.68
CLTC-207ENST00000483176 MNX1P50219 401 aaPredicted RBP10.76□□□□□ -0.69
CLTC-207ENST00000483176 CHRM1P11229 460 aaPredicted RBP10.72□□□□□ -0.69
CLTC-207ENST00000483176 VGFO15240 615 aaPredicted RBP10.71□□□□□ -0.69
CLTC-207ENST00000483176 STK25O00506 426 aa10.7□□□□□ -0.7
CLTC-207ENST00000483176 NKX1-1Q15270 411 aaPredicted RBP10.7□□□□□ -0.7
CLTC-207ENST00000483176 RASEFQ8IZ41 740 aa10.7□□□□□ -0.7
CLTC-207ENST00000483176 TPRNQ4KMQ1 711 aa10.69□□□□□ -0.7
CLTC-207ENST00000483176 GTPBP6O43824 516 aaPredicted RBP10.66□□□□□ -0.7
CLTC-207ENST00000483176 PITPNM1O00562 1244 aa10.63□□□□□ -0.71
CLTC-207ENST00000483176 SGIP1Q9BQI5 828 aa10.63□□□□□ -0.71
CLTC-207ENST00000483176 PYGBP11216 843 aa10.62□□□□□ -0.71
CLTC-207ENST00000483176 NBR1Q14596 966 aa10.62□□□□□ -0.71
CLTC-207ENST00000483176 BCL11BQ9C0K0 894 aaPredicted RBP10.61□□□□□ -0.71
CLTC-207ENST00000483176 STK24Q9Y6E0 443 aa10.61□□□□□ -0.71
CLTC-207ENST00000483176 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.6□□□□□ -0.71
CLTC-207ENST00000483176 ZFP91Q96JP5 570 aaPredicted RBP10.6□□□□□ -0.71
CLTC-207ENST00000483176 RYDENQ9NUL5 291 aaKnown RBP10.58□□□□□ -0.72
CLTC-207ENST00000483176 TSPYL2Q9H2G4 693 aaPredicted RBP10.51□□□□□ -0.73
CLTC-207ENST00000483176 CHADLQ6NUI6 762 aa10.5□□□□□ -0.73
CLTC-207ENST00000483176 ZNF467Q7Z7K2 595 aaPredicted RBP10.49□□□□□ -0.73
CLTC-207ENST00000483176 FARP1Q9Y4F1 1045 aaPredicted RBP10.48□□□□□ -0.73
CLTC-207ENST00000483176 PDAP1Q13442 181 aaKnown RBP10.44□□□□□ -0.74
CLTC-207ENST00000483176 PCDHB8Q9UN66 801 aa10.41□□□□□ -0.74
CLTC-207ENST00000483176 PCDHB13Q9Y5F0 798 aa10.41□□□□□ -0.74
CLTC-207ENST00000483176 PRKAR2AP13861 404 aaKnown RBP10.39□□□□□ -0.75
CLTC-207ENST00000483176 CCDC61Q9Y6R9 512 aa10.38□□□□□ -0.75
CLTC-207ENST00000483176 PSEN1P49768 467 aa10.37□□□□□ -0.75
CLTC-207ENST00000483176 ZNF579Q8NAF0 562 aaKnown RBP10.37□□□□□ -0.75
CLTC-207ENST00000483176 P3H3Q8IVL6 736 aa10.36□□□□□ -0.75
CLTC-207ENST00000483176 WDR70Q9NW82 654 aa10.35□□□□□ -0.75
CLTC-207ENST00000483176 PAK3O75914 559 aaPredicted RBP10.33□□□□□ -0.76
CLTC-207ENST00000483176 CADPS2Q86UW7 1296 aa10.33□□□□□ -0.76
CLTC-207ENST00000483176 FXR2P51116 673 aaKnown RBP eCLIP10.32□□□□□ -0.768e-9■■■■■ 27.1
CLTC-207ENST00000483176 MFRPQ9BY79 579 aa10.31□□□□□ -0.76
CLTC-207ENST00000483176 IFNL1Q8IU54 200 aa10.28□□□□□ -0.76
CLTC-207ENST00000483176 KCNV2Q8TDN2 545 aa10.26□□□□□ -0.77
CLTC-207ENST00000483176 MAP3K13O43283 966 aa10.25□□□□□ -0.77
CLTC-207ENST00000483176 KIF12Q96FN5 646 aa10.25□□□□□ -0.77
CLTC-207ENST00000483176 NLRP6P59044 892 aa10.24□□□□□ -0.77
CLTC-207ENST00000483176 EFCAB3Q8N7B9 438 aa10.24□□□□□ -0.77
CLTC-207ENST00000483176 SOX12O15370 315 aa10.23□□□□□ -0.77
CLTC-207ENST00000483176 CABP2Q9NPB3 220 aa10.23□□□□□ -0.77
CLTC-207ENST00000483176 PPP1R37O75864 691 aa10.22□□□□□ -0.77
CLTC-207ENST00000483176 CHRDL2Q6WN34 429 aa10.21□□□□□ -0.77
CLTC-207ENST00000483176 FBXO22Q8NEZ5 403 aa10.21□□□□□ -0.77
CLTC-207ENST00000483176 PIP4P2Q8N4L2 257 aa10.2□□□□□ -0.78
CLTC-207ENST00000483176 PHF8Q9UPP1 1060 aa10.19□□□□□ -0.78
CLTC-207ENST00000483176 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.17□□□□□ -0.78
CLTC-207ENST00000483176 LMOD2Q6P5Q4 547 aa10.16□□□□□ -0.78
CLTC-207ENST00000483176 ZRANB1Q9UGI0 708 aa10.16□□□□□ -0.78
CLTC-207ENST00000483176 TULP1O00294 542 aaPredicted RBP10.15□□□□□ -0.78
CLTC-207ENST00000483176 E2F4Q16254 413 aa10.15□□□□□ -0.78
CLTC-207ENST00000483176 ARHGEF1Q92888 912 aaKnown RBP10.15□□□□□ -0.78
CLTC-207ENST00000483176 CD44P16070 742 aaKnown RBP10.12□□□□□ -0.79
CLTC-207ENST00000483176 PHF12Q96QT6 1004 aa10.1□□□□□ -0.79
CLTC-207ENST00000483176 GOLGA2Q08379 1002 aa10.09□□□□□ -0.79
CLTC-207ENST00000483176 PDE4AP27815 886 aa10.08□□□□□ -0.8
CLTC-207ENST00000483176 MS4A4AQ96JQ5 239 aa10.07□□□□□ -0.8
CLTC-207ENST00000483176 LARP6Q9BRS8 491 aaKnown RBP10.07□□□□□ -0.8
CLTC-207ENST00000483176 TMEM106CQ9BVX2 250 aa10.07□□□□□ -0.8
CLTC-207ENST00000483176 NCKAP5LQ9HCH0 1330 aa10.07□□□□□ -0.8
CLTC-207ENST00000483176 SEMA3EO15041 775 aa10.05□□□□□ -0.8
CLTC-207ENST00000483176 TESPA1A2RU30 521 aaPredicted RBP10.04□□□□□ -0.8
CLTC-207ENST00000483176 GTF3C3Q9Y5Q9 886 aa10.04□□□□□ -0.8
CLTC-207ENST00000483176 MKRN3Q13064 507 aaKnown RBP10.03□□□□□ -0.8
CLTC-207ENST00000483176 TMEM132AQ24JP5 1023 aa10.03□□□□□ -0.8
CLTC-207ENST00000483176 MFSD10Q14728 455 aa10.02□□□□□ -0.81
CLTC-207ENST00000483176 ZC3H15Q8WU90 426 aaKnown RBP10.01□□□□□ -0.81
CLTC-207ENST00000483176 CRISPLD2Q9H0B8 497 aa10.01□□□□□ -0.81
CLTC-207ENST00000483176 DDX27Q96GQ7 796 aaKnown RBP10□□□□□ -0.81
CLTC-207ENST00000483176 MS4A3Q96HJ5 214 aa10□□□□□ -0.81
CLTC-207ENST00000483176 CCDC180Q9P1Z9 1646 aa9.98□□□□□ -0.81
CLTC-207ENST00000483176 SMYD5Q6GMV2 418 aa9.98□□□□□ -0.81
CLTC-207ENST00000483176 TRPC6Q9Y210 931 aa9.98□□□□□ -0.81
CLTC-207ENST00000483176 ARIH1Q9Y4X5 557 aaPredicted RBP9.97□□□□□ -0.81
CLTC-207ENST00000483176 TIMELESSQ9UNS1 1208 aa9.95□□□□□ -0.82
CLTC-207ENST00000483176 C19orf67A6NJJ6 358 aa9.94□□□□□ -0.82
CLTC-207ENST00000483176 TIE1P35590 1138 aa9.94□□□□□ -0.82
CLTC-207ENST00000483176 CAMK2BQ13554 666 aa9.94□□□□□ -0.82
CLTC-207ENST00000483176 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.93□□□□□ -0.826e-15■□□□□ 10.8
CLTC-207ENST00000483176 TTLL13PA6NNM8 815 aa9.92□□□□□ -0.82
CLTC-207ENST00000483176 BRPF1P55201 1214 aaPredicted RBP9.92□□□□□ -0.82
CLTC-207ENST00000483176 ERICH6Q7L0X2 663 aa9.91□□□□□ -0.82
CLTC-207ENST00000483176 SLC24A3Q9HC58 644 aa9.91□□□□□ -0.82
CLTC-207ENST00000483176 ILDR1Q86SU0 546 aaPredicted RBP9.9□□□□□ -0.82
CLTC-207ENST00000483176 GPHNQ9NQX3 736 aaPredicted RBP9.89□□□□□ -0.83
CLTC-207ENST00000483176 ZMYND10O75800 440 aa9.88□□□□□ -0.83
CLTC-207ENST00000483176 PPP1R15BQ5SWA1 713 aa9.88□□□□□ -0.83
CLTC-207ENST00000483176 NEUROD2Q15784 382 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms