RNA–Protein interactions for RNA: ENST00000482673.5

CCDC66-218, Transcript of coiled-coil domain containing 66, humanhuman

TSL 4

Gene CCDC66, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-218ENST00000482673 PHF12Q96QT6 1004 aa14.78□□□□□ -0.04
CCDC66-218ENST00000482673 FAM212AQ96EL1 285 aa14.75□□□□□ -0.05
CCDC66-218ENST00000482673 KLHL34Q8N239 644 aa14.74□□□□□ -0.05
CCDC66-218ENST00000482673 KIF12Q96FN5 646 aa14.7□□□□□ -0.06
CCDC66-218ENST00000482673 GALR2O43603 387 aaPredicted RBP14.69□□□□□ -0.06
CCDC66-218ENST00000482673 SPOCK2Q92563 424 aa14.69□□□□□ -0.06
CCDC66-218ENST00000482673 SGIP1Q9BQI5 828 aa14.65□□□□□ -0.06
CCDC66-218ENST00000482673 MS4A3Q96HJ5 214 aa14.64□□□□□ -0.07
CCDC66-218ENST00000482673 GSE1Q14687 1217 aa14.63□□□□□ -0.07
CCDC66-218ENST00000482673 POTEIP0CG38 1075 aa14.62□□□□□ -0.07
CCDC66-218ENST00000482673 MAP3K13O43283 966 aa14.6□□□□□ -0.07
CCDC66-218ENST00000482673 DCAF8Q5TAQ9 597 aa14.59□□□□□ -0.07
CCDC66-218ENST00000482673 CHRM1P11229 460 aaPredicted RBP14.55□□□□□ -0.08
CCDC66-218ENST00000482673 DCBLD2Q96PD2 775 aa14.54□□□□□ -0.08
CCDC66-218ENST00000482673 ASTLQ6HA08 431 aaPredicted RBP14.51□□□□□ -0.09
CCDC66-218ENST00000482673 PCDHB13Q9Y5F0 798 aa14.5□□□□□ -0.09
CCDC66-218ENST00000482673 PYGBP11216 843 aa14.47□□□□□ -0.09
CCDC66-218ENST00000482673 TIE1P35590 1138 aa14.47□□□□□ -0.09
CCDC66-218ENST00000482673 IFNL1Q8IU54 200 aa14.46□□□□□ -0.09
CCDC66-218ENST00000482673 ATMINO43313 823 aaPredicted RBP14.45□□□□□ -0.1
CCDC66-218ENST00000482673 TRIM41Q8WV44 630 aa14.45□□□□□ -0.1
CCDC66-218ENST00000482673 TRPC6Q9Y210 931 aa14.43□□□□□ -0.1
CCDC66-218ENST00000482673 BMP2KQ9NSY1 1161 aaPredicted RBP14.42□□□□□ -0.1
CCDC66-218ENST00000482673 CIZ1Q9ULV3 898 aaPredicted RBP14.4□□□□□ -0.1
CCDC66-218ENST00000482673 ZNF467Q7Z7K2 595 aaPredicted RBP14.38□□□□□ -0.11
CCDC66-218ENST00000482673 PELP1Q8IZL8 1130 aaKnown RBP14.37□□□□□ -0.11
CCDC66-218ENST00000482673 TTLL13PA6NNM8 815 aa14.36□□□□□ -0.11
CCDC66-218ENST00000482673 ATN1P54259 1190 aaPredicted RBP14.35□□□□□ -0.11
CCDC66-218ENST00000482673 PCDHB8Q9UN66 801 aa14.32□□□□□ -0.12
CCDC66-218ENST00000482673 SLC39A7Q92504 469 aa14.31□□□□□ -0.12
CCDC66-218ENST00000482673 C7P10643 843 aa14.29□□□□□ -0.12
CCDC66-218ENST00000482673 TMEM106CQ9BVX2 250 aa14.26□□□□□ -0.13
CCDC66-218ENST00000482673 IER5LQ5T953 404 aa14.25□□□□□ -0.13
CCDC66-218ENST00000482673 METRNQ9UJH8 293 aa14.24□□□□□ -0.13
CCDC66-218ENST00000482673 TRIM35Q9UPQ4 493 aa14.24□□□□□ -0.13
CCDC66-218ENST00000482673 PDAP1Q13442 181 aaKnown RBP14.22□□□□□ -0.13
CCDC66-218ENST00000482673 PKD2Q13563 968 aa14.22□□□□□ -0.13
CCDC66-218ENST00000482673 LHX8Q68G74 356 aa14.22□□□□□ -0.13
CCDC66-218ENST00000482673 RNF25Q96BH1 459 aaPredicted RBP14.21□□□□□ -0.13
CCDC66-218ENST00000482673 PSEN1P49768 467 aa14.19□□□□□ -0.14
CCDC66-218ENST00000482673 POTEFA5A3E0 1075 aa14.16□□□□□ -0.14
CCDC66-218ENST00000482673 RIOK3O14730 519 aaKnown RBP14.15□□□□□ -0.14
CCDC66-218ENST00000482673 POTEB2H3BUK9 544 aa14.13□□□□□ -0.15
CCDC66-218ENST00000482673 VGFO15240 615 aaPredicted RBP14.1□□□□□ -0.15
CCDC66-218ENST00000482673 IRX5P78411 483 aaPredicted RBP14.1□□□□□ -0.15
CCDC66-218ENST00000482673 ECM2O94769 699 aaPredicted RBP14.09□□□□□ -0.15
CCDC66-218ENST00000482673 COLQQ9Y215 455 aaPredicted RBP14.08□□□□□ -0.16
CCDC66-218ENST00000482673 ILDR1Q86SU0 546 aaPredicted RBP14.07□□□□□ -0.16
CCDC66-218ENST00000482673 TAOK2Q9UL54 1235 aa14.04□□□□□ -0.16
CCDC66-218ENST00000482673 POTEJP0CG39 1038 aa14.03□□□□□ -0.16
CCDC66-218ENST00000482673 SEC24BO95487 1268 aa14.02□□□□□ -0.17
CCDC66-218ENST00000482673 RGL2O15211 777 aa14.01□□□□□ -0.17
CCDC66-218ENST00000482673 OCEL1Q9H607 264 aa14.01□□□□□ -0.17
CCDC66-218ENST00000482673 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14□□□□□ -0.17
CCDC66-218ENST00000482673 ZFP91Q96JP5 570 aaPredicted RBP14□□□□□ -0.17
CCDC66-218ENST00000482673 GOLGA2Q08379 1002 aa13.99□□□□□ -0.17
CCDC66-218ENST00000482673 OTUD5Q96G74 571 aa13.99□□□□□ -0.17
CCDC66-218ENST00000482673 PLCG2P16885 1265 aa13.98□□□□□ -0.17
CCDC66-218ENST00000482673 MKRN3Q13064 507 aaKnown RBP13.98□□□□□ -0.17
CCDC66-218ENST00000482673 CABP2Q9NPB3 220 aa13.98□□□□□ -0.17
CCDC66-218ENST00000482673 PDCD7Q8N8D1 485 aaKnown RBP13.97□□□□□ -0.17
CCDC66-218ENST00000482673 MAMSTRQ6ZN01 415 aa13.96□□□□□ -0.17
CCDC66-218ENST00000482673 EFCAB3Q8N7B9 438 aa13.89□□□□□ -0.19
CCDC66-218ENST00000482673 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.89□□□□□ -0.197e-7■■■■■ 27
CCDC66-218ENST00000482673 BCL11BQ9C0K0 894 aaPredicted RBP13.88□□□□□ -0.19
CCDC66-218ENST00000482673 SOX12O15370 315 aa13.87□□□□□ -0.19
CCDC66-218ENST00000482673 SCUBE2Q9NQ36 999 aa13.87□□□□□ -0.19
CCDC66-218ENST00000482673 STK25O00506 426 aa13.83□□□□□ -0.2
CCDC66-218ENST00000482673 STK24Q9Y6E0 443 aa13.81□□□□□ -0.2
CCDC66-218ENST00000482673 HS6ST3Q8IZP7 471 aa13.8□□□□□ -0.2
CCDC66-218ENST00000482673 L3MBTL3Q96JM7 780 aaPredicted RBP13.8□□□□□ -0.2
CCDC66-218ENST00000482673 DNAJC5Q9H3Z4 198 aa13.78□□□□□ -0.2
CCDC66-218ENST00000482673 FBXO22Q8NEZ5 403 aa13.76□□□□□ -0.21
CCDC66-218ENST00000482673 MS4A4AQ96JQ5 239 aa13.76□□□□□ -0.21
CCDC66-218ENST00000482673 AMER1Q5JTC6 1135 aaPredicted RBP13.75□□□□□ -0.21
CCDC66-218ENST00000482673 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
CCDC66-218ENST00000482673 TMEM121BQ9BXQ6 578 aaPredicted RBP13.74□□□□□ -0.21
CCDC66-218ENST00000482673 MFRPQ9BY79 579 aa13.73□□□□□ -0.21
CCDC66-218ENST00000482673 PHF8Q9UPP1 1060 aa13.73□□□□□ -0.21
CCDC66-218ENST00000482673 NLRP6P59044 892 aa13.72□□□□□ -0.21
CCDC66-218ENST00000482673 BOLA1Q9Y3E2 137 aa13.71□□□□□ -0.21
CCDC66-218ENST00000482673 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.68□□□□□ -0.22
CCDC66-218ENST00000482673 C3orf67Q6ZVT6 689 aa13.65□□□□□ -0.22
CCDC66-218ENST00000482673 CHGAP10645 457 aaKnown RBP13.64□□□□□ -0.23
CCDC66-218ENST00000482673 SLAIN1Q8ND83 568 aa13.64□□□□□ -0.23
CCDC66-218ENST00000482673 MICALL2Q8IY33 904 aa13.63□□□□□ -0.23
CCDC66-218ENST00000482673 RTN4Q9NQC3 1192 aaKnown RBP13.62□□□□□ -0.23
CCDC66-218ENST00000482673 G3V3G9 751 aa13.6□□□□□ -0.23
CCDC66-218ENST00000482673 NKX1-1Q15270 411 aaPredicted RBP13.56□□□□□ -0.24
CCDC66-218ENST00000482673 LCE2DQ5TA82 110 aaPredicted RBP13.54□□□□□ -0.24
CCDC66-218ENST00000482673 RYDENQ9NUL5 291 aaKnown RBP13.51□□□□□ -0.25
CCDC66-218ENST00000482673 SNPHO15079 494 aa13.48□□□□□ -0.25
CCDC66-218ENST00000482673 TMEM92Q6UXU6 159 aa13.48□□□□□ -0.25
CCDC66-218ENST00000482673 PPP1R37O75864 691 aa13.46□□□□□ -0.25
CCDC66-218ENST00000482673 KIF3CO14782 793 aa13.43□□□□□ -0.26
CCDC66-218ENST00000482673 DCAF8L2P0C7V8 631 aa13.42□□□□□ -0.26
CCDC66-218ENST00000482673 GTPBP6O43824 516 aaPredicted RBP13.41□□□□□ -0.26
CCDC66-218ENST00000482673 ST18O60284 1047 aa13.39□□□□□ -0.27
CCDC66-218ENST00000482673 HOXB3P14651 431 aaPredicted RBP13.39□□□□□ -0.27
CCDC66-218ENST00000482673 FAM163AQ96GL9 167 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms