RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 NEUROD2Q15784 382 aa12.79□□□□□ -0.36
RBM39-233ENST00000482563 STAG3Q9UJ98 1225 aa12.79□□□□□ -0.36
RBM39-233ENST00000482563 APLP2Q06481 763 aa12.73□□□□□ -0.37
RBM39-233ENST00000482563 MIER1Q8N108 512 aa12.73□□□□□ -0.37
RBM39-233ENST00000482563 RNF39Q9H2S5 420 aa12.73□□□□□ -0.37
RBM39-233ENST00000482563 P3H3Q8IVL6 736 aa12.71□□□□□ -0.37
RBM39-233ENST00000482563 KCNV2Q8TDN2 545 aa12.71□□□□□ -0.38
RBM39-233ENST00000482563 TRIM41Q8WV44 630 aa12.71□□□□□ -0.38
RBM39-233ENST00000482563 POLA2Q14181 598 aa12.69□□□□□ -0.38
RBM39-233ENST00000482563 ZC3H15Q8WU90 426 aaKnown RBP12.68□□□□□ -0.38
RBM39-233ENST00000482563 ZMYND15Q9H091 742 aa12.68□□□□□ -0.38
RBM39-233ENST00000482563 SLC24A3Q9HC58 644 aa12.67□□□□□ -0.38
RBM39-233ENST00000482563 RSPH6AQ9H0K4 717 aa12.62□□□□□ -0.39
RBM39-233ENST00000482563 C1orf115Q9H7X2 142 aa12.62□□□□□ -0.39
RBM39-233ENST00000482563 ARID3AQ99856 593 aa12.57□□□□□ -0.4
RBM39-233ENST00000482563 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
RBM39-233ENST00000482563 STK25O00506 426 aa12.55□□□□□ -0.4
RBM39-233ENST00000482563 CADPS2Q86UW7 1296 aa12.53□□□□□ -0.4
RBM39-233ENST00000482563 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
RBM39-233ENST00000482563 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
RBM39-233ENST00000482563 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
RBM39-233ENST00000482563 POTEHQ6S545 545 aa12.47□□□□□ -0.41
RBM39-233ENST00000482563 ZNF692Q9BU19 519 aaPredicted RBP12.47□□□□□ -0.41
RBM39-233ENST00000482563 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
RBM39-233ENST00000482563 ZMYND10O75800 440 aa12.43□□□□□ -0.42
RBM39-233ENST00000482563 GSE1Q14687 1217 aa12.43□□□□□ -0.42
RBM39-233ENST00000482563 CCDC9Q9Y3X0 531 aaKnown RBP12.43□□□□□ -0.42
RBM39-233ENST00000482563 WDR70Q9NW82 654 aa12.42□□□□□ -0.42
RBM39-233ENST00000482563 SSUH2Q9Y2M2 353 aa12.42□□□□□ -0.42
RBM39-233ENST00000482563 VGFO15240 615 aaPredicted RBP12.42□□□□□ -0.42
RBM39-233ENST00000482563 ARID3CA6NKF2 412 aa12.4□□□□□ -0.43
RBM39-233ENST00000482563 PABPN1Q86U42 306 aaKnown RBP eCLIP12.4□□□□□ -0.435e-16■□□□□ 10.9
RBM39-233ENST00000482563 BCL11BQ9C0K0 894 aaPredicted RBP12.4□□□□□ -0.43
RBM39-233ENST00000482563 RYDENQ9NUL5 291 aaKnown RBP12.4□□□□□ -0.43
RBM39-233ENST00000482563 GPBP1L1Q9HC44 474 aaPredicted RBP12.39□□□□□ -0.43
RBM39-233ENST00000482563 ZBTB12Q9Y330 459 aaPredicted RBP12.38□□□□□ -0.43
RBM39-233ENST00000482563 TESPA1A2RU30 521 aaPredicted RBP12.37□□□□□ -0.43
RBM39-233ENST00000482563 SEMA3EO15041 775 aa12.37□□□□□ -0.43
RBM39-233ENST00000482563 NUBP1P53384 320 aa12.37□□□□□ -0.43
RBM39-233ENST00000482563 STK24Q9Y6E0 443 aa12.37□□□□□ -0.43
RBM39-233ENST00000482563 ZBTB7CA1YPR0 619 aa12.36□□□□□ -0.43
RBM39-233ENST00000482563 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
RBM39-233ENST00000482563 PLEKHG5O94827 1062 aa12.35□□□□□ -0.43
RBM39-233ENST00000482563 SGIP1Q9BQI5 828 aa12.35□□□□□ -0.43
RBM39-233ENST00000482563 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.34□□□□□ -0.43
RBM39-233ENST00000482563 ZFP91Q96JP5 570 aaPredicted RBP12.34□□□□□ -0.43
RBM39-233ENST00000482563 PDIA4P13667 645 aaKnown RBP12.34□□□□□ -0.43
RBM39-233ENST00000482563 ARHGEF1Q92888 912 aaKnown RBP12.34□□□□□ -0.43
RBM39-233ENST00000482563 LOC105371045A0A1W2PR82 267 aa12.33□□□□□ -0.44
RBM39-233ENST00000482563 APBB1O00213 710 aa12.31□□□□□ -0.44
RBM39-233ENST00000482563 MKRN3Q13064 507 aaKnown RBP12.31□□□□□ -0.44
RBM39-233ENST00000482563 BARGINQ6ZT62 677 aa12.3□□□□□ -0.44
RBM39-233ENST00000482563 DCAF8Q5TAQ9 597 aa12.27□□□□□ -0.45
RBM39-233ENST00000482563 SPDYE2BA6NHP3 402 aa12.26□□□□□ -0.45
RBM39-233ENST00000482563 SPDYE6P0CI01 402 aa12.26□□□□□ -0.45
RBM39-233ENST00000482563 SPDYE2Q495Y8 402 aa12.26□□□□□ -0.45
RBM39-233ENST00000482563 KDM4CQ9H3R0 1056 aa12.24□□□□□ -0.45
RBM39-233ENST00000482563 OSCARQ8IYS5 282 aa12.23□□□□□ -0.45
RBM39-233ENST00000482563 ABCB7O75027 752 aa12.22□□□□□ -0.45
RBM39-233ENST00000482563 CAPN15O75808 1086 aa12.22□□□□□ -0.45
RBM39-233ENST00000482563 CHRM1P11229 460 aaPredicted RBP12.21□□□□□ -0.45
RBM39-233ENST00000482563 AK7Q96M32 723 aa12.2□□□□□ -0.46
RBM39-233ENST00000482563 E2F4Q16254 413 aa12.17□□□□□ -0.46
RBM39-233ENST00000482563 CCDC82Q8N4S0 544 aa12.15□□□□□ -0.46
RBM39-233ENST00000482563 KCTD17Q8N5Z5 321 aa12.12□□□□□ -0.47
RBM39-233ENST00000482563 IGSF3O75054 1194 aa12.11□□□□□ -0.47
RBM39-233ENST00000482563 TRIM66O15016 1216 aa12.09□□□□□ -0.47
RBM39-233ENST00000482563 PDE4DQ08499 809 aa12.08□□□□□ -0.47
RBM39-233ENST00000482563 FAM212AQ96EL1 285 aa12.08□□□□□ -0.48
RBM39-233ENST00000482563 FAM117AQ9C073 453 aa12.08□□□□□ -0.48
RBM39-233ENST00000482563 RGS22Q8NE09 1264 aa12.07□□□□□ -0.48
RBM39-233ENST00000482563 ONECUT3O60422 494 aaPredicted RBP12.06□□□□□ -0.48
RBM39-233ENST00000482563 SMYD5Q6GMV2 418 aa12.05□□□□□ -0.48
RBM39-233ENST00000482563 RAD21O60216 631 aa12.04□□□□□ -0.48
RBM39-233ENST00000482563 TRAIPQ9BWF2 469 aa12.04□□□□□ -0.48
RBM39-233ENST00000482563 PLEKHG3A1L390 1219 aa12.03□□□□□ -0.48
RBM39-233ENST00000482563 TRAK2O60296 914 aa12.03□□□□□ -0.48
RBM39-233ENST00000482563 FLIIQ13045 1269 aa12.03□□□□□ -0.48
RBM39-233ENST00000482563 RBM26Q5T8P6 1007 aaKnown RBP12.03□□□□□ -0.48
RBM39-233ENST00000482563 KRI1Q8N9T8 703 aaKnown RBP12.02□□□□□ -0.49
RBM39-233ENST00000482563 ZNF316A6NFI3 1004 aaPredicted RBP12.01□□□□□ -0.49
RBM39-233ENST00000482563 PYGBP11216 843 aa12.01□□□□□ -0.49
RBM39-233ENST00000482563 RASEFQ8IZ41 740 aa12.01□□□□□ -0.49
RBM39-233ENST00000482563 CLUAP1Q96AJ1 413 aa12.01□□□□□ -0.49
RBM39-233ENST00000482563 MFRPQ9BY79 579 aa12.01□□□□□ -0.49
RBM39-233ENST00000482563 A6NJR5 290 aa12□□□□□ -0.49
RBM39-233ENST00000482563 PPP1R37O75864 691 aa12□□□□□ -0.49
RBM39-233ENST00000482563 MTMR7Q9Y216 660 aa11.98□□□□□ -0.49
RBM39-233ENST00000482563 MNX1P50219 401 aaPredicted RBP11.97□□□□□ -0.49
RBM39-233ENST00000482563 GPIHBP1Q8IV16 184 aa11.97□□□□□ -0.49
RBM39-233ENST00000482563 ZNF428Q96B54 188 aa11.95□□□□□ -0.5
RBM39-233ENST00000482563 SHROOM4Q9ULL8 1493 aa11.95□□□□□ -0.5
RBM39-233ENST00000482563 AEBP1Q8IUX7 1158 aa11.93□□□□□ -0.5
RBM39-233ENST00000482563 MLLT3P42568 568 aaPredicted RBP11.92□□□□□ -0.5
RBM39-233ENST00000482563 ARIH1Q9Y4X5 557 aaPredicted RBP11.92□□□□□ -0.5
RBM39-233ENST00000482563 NCKAP5LQ9HCH0 1330 aa11.92□□□□□ -0.5
RBM39-233ENST00000482563 FOXD4L5Q5VV16 416 aaPredicted RBP11.89□□□□□ -0.51
RBM39-233ENST00000482563 FOXD4L4Q8WXT5 416 aaPredicted RBP11.89□□□□□ -0.51
RBM39-233ENST00000482563 PELP1Q8IZL8 1130 aaKnown RBP11.87□□□□□ -0.51
RBM39-233ENST00000482563 MFAP1P55081 439 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms