RNA–Protein interactions for RNA: ENST00000482499.1

CMC1-210, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 446 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-210ENST00000482499 RASEFQ8IZ41 740 aa14.35□□□□□ -0.11
CMC1-210ENST00000482499 PLCD3Q8N3E9 789 aa14.34□□□□□ -0.11
CMC1-210ENST00000482499 POTEB2H3BUK9 544 aa14.31□□□□□ -0.12
CMC1-210ENST00000482499 KIF12Q96FN5 646 aa14.31□□□□□ -0.12
CMC1-210ENST00000482499 ATMINO43313 823 aaPredicted RBP14.29□□□□□ -0.12
CMC1-210ENST00000482499 ASTLQ6HA08 431 aaPredicted RBP14.29□□□□□ -0.12
CMC1-210ENST00000482499 MAP3K13O43283 966 aa14.24□□□□□ -0.13
CMC1-210ENST00000482499 OTUD5Q96G74 571 aa14.23□□□□□ -0.13
CMC1-210ENST00000482499 TRPC6Q9Y210 931 aa14.22□□□□□ -0.13
CMC1-210ENST00000482499 NUBP1P53384 320 aa14.21□□□□□ -0.13
CMC1-210ENST00000482499 METRNQ9UJH8 293 aa14.2□□□□□ -0.14
CMC1-210ENST00000482499 ATN1P54259 1190 aaPredicted RBP14.19□□□□□ -0.14
CMC1-210ENST00000482499 ZBTB47Q9UFB7 747 aaPredicted RBP14.18□□□□□ -0.14
CMC1-210ENST00000482499 SLC39A7Q92504 469 aa14.17□□□□□ -0.14
CMC1-210ENST00000482499 C7P10643 843 aa14.16□□□□□ -0.14
CMC1-210ENST00000482499 BMP2KQ9NSY1 1161 aaPredicted RBP14.16□□□□□ -0.14
CMC1-210ENST00000482499 POTEJP0CG39 1038 aa14.11□□□□□ -0.15
CMC1-210ENST00000482499 TIE1P35590 1138 aa14.08□□□□□ -0.16
CMC1-210ENST00000482499 PCDHB13Q9Y5F0 798 aa14.07□□□□□ -0.16
CMC1-210ENST00000482499 FAM212AQ96EL1 285 aa14.06□□□□□ -0.16
CMC1-210ENST00000482499 FBXO3Q9UK99 471 aa14.06□□□□□ -0.16
CMC1-210ENST00000482499 TTLL13PA6NNM8 815 aa14.05□□□□□ -0.16
CMC1-210ENST00000482499 POTEFA5A3E0 1075 aa14.04□□□□□ -0.16
CMC1-210ENST00000482499 SGIP1Q9BQI5 828 aa14.03□□□□□ -0.16
CMC1-210ENST00000482499 IFNL1Q8IU54 200 aa14.02□□□□□ -0.17
CMC1-210ENST00000482499 DCAF8Q5TAQ9 597 aa13.97□□□□□ -0.17
CMC1-210ENST00000482499 TRIM35Q9UPQ4 493 aa13.96□□□□□ -0.17
CMC1-210ENST00000482499 COLQQ9Y215 455 aaPredicted RBP13.96□□□□□ -0.17
CMC1-210ENST00000482499 VASPP50552 380 aaPredicted RBP13.94□□□□□ -0.18
CMC1-210ENST00000482499 PYGBP11216 843 aa13.93□□□□□ -0.18
CMC1-210ENST00000482499 MAMSTRQ6ZN01 415 aa13.93□□□□□ -0.18
CMC1-210ENST00000482499 SEC24BO95487 1268 aa13.9□□□□□ -0.18
CMC1-210ENST00000482499 KLHL34Q8N239 644 aa13.9□□□□□ -0.18
CMC1-210ENST00000482499 TMEM106CQ9BVX2 250 aa13.9□□□□□ -0.18
CMC1-210ENST00000482499 SCUBE2Q9NQ36 999 aa13.88□□□□□ -0.19
CMC1-210ENST00000482499 IER5LQ5T953 404 aa13.86□□□□□ -0.19
CMC1-210ENST00000482499 PCDHB8Q9UN66 801 aa13.83□□□□□ -0.2
CMC1-210ENST00000482499 POTEMA6NI47 508 aa13.82□□□□□ -0.2
CMC1-210ENST00000482499 POTEGQ6S5H5 508 aa13.79□□□□□ -0.2
CMC1-210ENST00000482499 GSE1Q14687 1217 aa13.77□□□□□ -0.21
CMC1-210ENST00000482499 LCE2DQ5TA82 110 aaPredicted RBP13.75□□□□□ -0.21
CMC1-210ENST00000482499 IRX5P78411 483 aaPredicted RBP13.74□□□□□ -0.21
CMC1-210ENST00000482499 FAM163AQ96GL9 167 aaPredicted RBP13.74□□□□□ -0.21
CMC1-210ENST00000482499 PLSCR2Q9NRY7 297 aa13.74□□□□□ -0.21
CMC1-210ENST00000482499 IFNLR1Q8IU57 520 aaPredicted RBP13.73□□□□□ -0.21
CMC1-210ENST00000482499 PLCG2P16885 1265 aa13.72□□□□□ -0.21
CMC1-210ENST00000482499 CHRM1P11229 460 aaPredicted RBP13.67□□□□□ -0.22
CMC1-210ENST00000482499 ZNF467Q7Z7K2 595 aaPredicted RBP13.66□□□□□ -0.22
CMC1-210ENST00000482499 OCEL1Q9H607 264 aa13.66□□□□□ -0.22
CMC1-210ENST00000482499 SPOCK2Q92563 424 aa13.65□□□□□ -0.22
CMC1-210ENST00000482499 SLAIN1Q8ND83 568 aa13.63□□□□□ -0.23
CMC1-210ENST00000482499 CIZ1Q9ULV3 898 aaPredicted RBP13.61□□□□□ -0.23
CMC1-210ENST00000482499 PSEN1P49768 467 aa13.58□□□□□ -0.24
CMC1-210ENST00000482499 PDCD7Q8N8D1 485 aaKnown RBP13.54□□□□□ -0.24
CMC1-210ENST00000482499 GOLGA2Q08379 1002 aa13.53□□□□□ -0.24
CMC1-210ENST00000482499 MKRN3Q13064 507 aaKnown RBP13.53□□□□□ -0.24
CMC1-210ENST00000482499 PCDH10Q9P2E7 1040 aa13.52□□□□□ -0.25
CMC1-210ENST00000482499 PDAP1Q13442 181 aaKnown RBP13.5□□□□□ -0.25
CMC1-210ENST00000482499 ST18O60284 1047 aa13.48□□□□□ -0.25
CMC1-210ENST00000482499 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.48□□□□□ -0.25
CMC1-210ENST00000482499 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.47□□□□□ -0.25
CMC1-210ENST00000482499 CABP2Q9NPB3 220 aa13.43□□□□□ -0.26
CMC1-210ENST00000482499 DPY19L2Q6NUT2 758 aa13.4□□□□□ -0.26
CMC1-210ENST00000482499 ILDR1Q86SU0 546 aaPredicted RBP13.4□□□□□ -0.26
CMC1-210ENST00000482499 L3MBTL3Q96JM7 780 aaPredicted RBP13.4□□□□□ -0.26
CMC1-210ENST00000482499 C3orf67Q6ZVT6 689 aa13.39□□□□□ -0.27
CMC1-210ENST00000482499 CDAN1Q8IWY9 1227 aa13.37□□□□□ -0.27
CMC1-210ENST00000482499 SNPHO15079 494 aa13.33□□□□□ -0.28
CMC1-210ENST00000482499 TRIM41Q8WV44 630 aa13.33□□□□□ -0.28
CMC1-210ENST00000482499 EFCAB3Q8N7B9 438 aa13.28□□□□□ -0.28
CMC1-210ENST00000482499 MARVELD3Q96A59 401 aa13.28□□□□□ -0.28
CMC1-210ENST00000482499 TMEM121BQ9BXQ6 578 aaPredicted RBP13.28□□□□□ -0.28
CMC1-210ENST00000482499 RNF25Q96BH1 459 aaPredicted RBP13.27□□□□□ -0.29
CMC1-210ENST00000482499 BOLA1Q9Y3E2 137 aa13.26□□□□□ -0.29
CMC1-210ENST00000482499 RIOK3O14730 519 aaKnown RBP13.22□□□□□ -0.29
CMC1-210ENST00000482499 G3V3G9 751 aa13.21□□□□□ -0.29
CMC1-210ENST00000482499 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
CMC1-210ENST00000482499 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
CMC1-210ENST00000482499 VGFO15240 615 aaPredicted RBP13.14□□□□□ -0.31
CMC1-210ENST00000482499 EMP3P54852 163 aa13.14□□□□□ -0.31
CMC1-210ENST00000482499 HOXB3P14651 431 aaPredicted RBP13.12□□□□□ -0.31
CMC1-210ENST00000482499 POTEB3A0JP26 581 aa13.11□□□□□ -0.31
CMC1-210ENST00000482499 POTEBQ6S5H4 581 aa13.11□□□□□ -0.31
CMC1-210ENST00000482499 MS4A4AQ96JQ5 239 aa13.11□□□□□ -0.31
CMC1-210ENST00000482499 SOX12O15370 315 aa13.1□□□□□ -0.31
CMC1-210ENST00000482499 PHF8Q9UPP1 1060 aa13.1□□□□□ -0.31
CMC1-210ENST00000482499 MICALL2Q8IY33 904 aa13.09□□□□□ -0.31
CMC1-210ENST00000482499 FAM205CA6NFA0 338 aa13.07□□□□□ -0.32
CMC1-210ENST00000482499 TMEM92Q6UXU6 159 aa13.06□□□□□ -0.32
CMC1-210ENST00000482499 HS3ST6Q96QI5 342 aa13.06□□□□□ -0.32
CMC1-210ENST00000482499 SPNS2Q8IVW8 549 aa13.05□□□□□ -0.32
CMC1-210ENST00000482499 BCL11BQ9C0K0 894 aaPredicted RBP13.03□□□□□ -0.32
CMC1-210ENST00000482499 MMRN1Q13201 1228 aa13.01□□□□□ -0.33
CMC1-210ENST00000482499 ZNF710Q8N1W2 664 aa13.01□□□□□ -0.33
CMC1-210ENST00000482499 DOK7Q18PE1 504 aa13□□□□□ -0.33
CMC1-210ENST00000482499 KRTAP3-3Q9BYR6 98 aa13□□□□□ -0.33
CMC1-210ENST00000482499 KRTAP3-2Q9BYR7 98 aa13□□□□□ -0.33
CMC1-210ENST00000482499 HOXB1P14653 301 aaPredicted RBP12.99□□□□□ -0.33
CMC1-210ENST00000482499 STK24Q9Y6E0 443 aa12.99□□□□□ -0.33
CMC1-210ENST00000482499 ECM2O94769 699 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms