RNA–Protein interactions for RNA: ENST00000482229.1

NEPRO-216, Transcript of nucleolus and neural progenitor protein, humanhuman

TSL 2

Gene NEPRO, Length 814 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEPRO-216ENST00000482229 CCDC61Q9Y6R9 512 aa14.61□□□□□ -0.07
NEPRO-216ENST00000482229 C7P10643 843 aa14.6□□□□□ -0.07
NEPRO-216ENST00000482229 TSPYL2Q9H2G4 693 aaPredicted RBP14.6□□□□□ -0.07
NEPRO-216ENST00000482229 SLC39A7Q92504 469 aa14.59□□□□□ -0.07
NEPRO-216ENST00000482229 PLSCR2Q9NRY7 297 aa14.59□□□□□ -0.07
NEPRO-216ENST00000482229 POTEJP0CG39 1038 aa14.55□□□□□ -0.08
NEPRO-216ENST00000482229 KIF12Q96FN5 646 aa14.53□□□□□ -0.08
NEPRO-216ENST00000482229 POTEMA6NI47 508 aa14.49□□□□□ -0.09
NEPRO-216ENST00000482229 ATN1P54259 1190 aaPredicted RBP14.49□□□□□ -0.09
NEPRO-216ENST00000482229 MAMSTRQ6ZN01 415 aa14.46□□□□□ -0.09
NEPRO-216ENST00000482229 POTEGQ6S5H5 508 aa14.45□□□□□ -0.1
NEPRO-216ENST00000482229 MIER1Q8N108 512 aa14.44□□□□□ -0.1
NEPRO-216ENST00000482229 BMP2KQ9NSY1 1161 aaPredicted RBP14.43□□□□□ -0.1
NEPRO-216ENST00000482229 PLEKHG5O94827 1062 aa14.42□□□□□ -0.1
NEPRO-216ENST00000482229 RASEFQ8IZ41 740 aa14.42□□□□□ -0.1
NEPRO-216ENST00000482229 TRPC6Q9Y210 931 aa14.42□□□□□ -0.1
NEPRO-216ENST00000482229 MAP3K13O43283 966 aa14.41□□□□□ -0.1
NEPRO-216ENST00000482229 POTEFA5A3E0 1075 aa14.39□□□□□ -0.11
NEPRO-216ENST00000482229 TIE1P35590 1138 aa14.38□□□□□ -0.11
NEPRO-216ENST00000482229 SCUBE2Q9NQ36 999 aa14.34□□□□□ -0.11
NEPRO-216ENST00000482229 LCE2DQ5TA82 110 aaPredicted RBP14.32□□□□□ -0.12
NEPRO-216ENST00000482229 PCDH10Q9P2E7 1040 aa14.32□□□□□ -0.12
NEPRO-216ENST00000482229 TTLL13PA6NNM8 815 aa14.29□□□□□ -0.12
NEPRO-216ENST00000482229 PLCD3Q8N3E9 789 aa14.27□□□□□ -0.13
NEPRO-216ENST00000482229 SGIP1Q9BQI5 828 aa14.27□□□□□ -0.13
NEPRO-216ENST00000482229 COLQQ9Y215 455 aaPredicted RBP14.25□□□□□ -0.13
NEPRO-216ENST00000482229 FAM163AQ96GL9 167 aaPredicted RBP14.24□□□□□ -0.13
NEPRO-216ENST00000482229 NUBP1P53384 320 aa14.23□□□□□ -0.13
NEPRO-216ENST00000482229 ZBTB47Q9UFB7 747 aaPredicted RBP14.21□□□□□ -0.13
NEPRO-216ENST00000482229 PCDHB13Q9Y5F0 798 aa14.21□□□□□ -0.13
NEPRO-216ENST00000482229 SEC24BO95487 1268 aa14.19□□□□□ -0.14
NEPRO-216ENST00000482229 IER5LQ5T953 404 aa14.19□□□□□ -0.14
NEPRO-216ENST00000482229 TRIM35Q9UPQ4 493 aa14.19□□□□□ -0.14
NEPRO-216ENST00000482229 IFNL1Q8IU54 200 aa14.14□□□□□ -0.15
NEPRO-216ENST00000482229 FAM212AQ96EL1 285 aa14.09□□□□□ -0.15
NEPRO-216ENST00000482229 TMEM106CQ9BVX2 250 aa14.06□□□□□ -0.16
NEPRO-216ENST00000482229 FKBP8Q14318 412 aa14.02□□□□□ -0.17
NEPRO-216ENST00000482229 IRX5P78411 483 aaPredicted RBP13.99□□□□□ -0.17
NEPRO-216ENST00000482229 PLCG2P16885 1265 aa13.98□□□□□ -0.17
NEPRO-216ENST00000482229 SLAIN1Q8ND83 568 aa13.98□□□□□ -0.17
NEPRO-216ENST00000482229 CDAN1Q8IWY9 1227 aa13.94□□□□□ -0.18
NEPRO-216ENST00000482229 ST18O60284 1047 aa13.92□□□□□ -0.18
NEPRO-216ENST00000482229 DCAF8Q5TAQ9 597 aa13.92□□□□□ -0.18
NEPRO-216ENST00000482229 PYGBP11216 843 aa13.91□□□□□ -0.18
NEPRO-216ENST00000482229 OCEL1Q9H607 264 aa13.9□□□□□ -0.18
NEPRO-216ENST00000482229 PCDHB8Q9UN66 801 aa13.86□□□□□ -0.19
NEPRO-216ENST00000482229 FBXO3Q9UK99 471 aa13.85□□□□□ -0.19
NEPRO-216ENST00000482229 TMEM121BQ9BXQ6 578 aaPredicted RBP13.77□□□□□ -0.21
NEPRO-216ENST00000482229 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.77□□□□□ -0.21
NEPRO-216ENST00000482229 SNPHO15079 494 aa13.74□□□□□ -0.21
NEPRO-216ENST00000482229 PDCD7Q8N8D1 485 aaKnown RBP13.74□□□□□ -0.21
NEPRO-216ENST00000482229 GSE1Q14687 1217 aa13.73□□□□□ -0.21
NEPRO-216ENST00000482229 ZNF467Q7Z7K2 595 aaPredicted RBP13.72□□□□□ -0.21
NEPRO-216ENST00000482229 CHRM1P11229 460 aaPredicted RBP13.71□□□□□ -0.21
NEPRO-216ENST00000482229 VASPP50552 380 aaPredicted RBP13.71□□□□□ -0.21
NEPRO-216ENST00000482229 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
NEPRO-216ENST00000482229 MKRN3Q13064 507 aaKnown RBP13.65□□□□□ -0.22
NEPRO-216ENST00000482229 L3MBTL3Q96JM7 780 aaPredicted RBP13.64□□□□□ -0.23
NEPRO-216ENST00000482229 MARVELD3Q96A59 401 aa13.63□□□□□ -0.23
NEPRO-216ENST00000482229 GOLGA2Q08379 1002 aa13.62□□□□□ -0.23
NEPRO-216ENST00000482229 SPNS2Q8IVW8 549 aa13.62□□□□□ -0.23
NEPRO-216ENST00000482229 PSEN1P49768 467 aa13.61□□□□□ -0.23
NEPRO-216ENST00000482229 C3orf67Q6ZVT6 689 aa13.61□□□□□ -0.23
NEPRO-216ENST00000482229 MMRN1Q13201 1228 aa13.6□□□□□ -0.23
NEPRO-216ENST00000482229 ILDR1Q86SU0 546 aaPredicted RBP13.59□□□□□ -0.23
NEPRO-216ENST00000482229 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.59□□□□□ -0.233e-6■■■■□ 23
NEPRO-216ENST00000482229 PDAP1Q13442 181 aaKnown RBP13.53□□□□□ -0.24
NEPRO-216ENST00000482229 EMP3P54852 163 aa13.5□□□□□ -0.25
NEPRO-216ENST00000482229 DPY19L2Q6NUT2 758 aa13.48□□□□□ -0.25
NEPRO-216ENST00000482229 POTEB3A0JP26 581 aa13.47□□□□□ -0.25
NEPRO-216ENST00000482229 POTEBQ6S5H4 581 aa13.47□□□□□ -0.25
NEPRO-216ENST00000482229 IFNLR1Q8IU57 520 aaPredicted RBP13.45□□□□□ -0.26
NEPRO-216ENST00000482229 SPOCK2Q92563 424 aa13.45□□□□□ -0.26
NEPRO-216ENST00000482229 HS3ST6Q96QI5 342 aa13.44□□□□□ -0.26
NEPRO-216ENST00000482229 CABP2Q9NPB3 220 aa13.44□□□□□ -0.26
NEPRO-216ENST00000482229 KRTAP3-3Q9BYR6 98 aa13.43□□□□□ -0.26
NEPRO-216ENST00000482229 KRTAP3-2Q9BYR7 98 aa13.43□□□□□ -0.26
NEPRO-216ENST00000482229 FAM205CA6NFA0 338 aa13.41□□□□□ -0.26
NEPRO-216ENST00000482229 BOLA1Q9Y3E2 137 aa13.41□□□□□ -0.26
NEPRO-216ENST00000482229 CIZ1Q9ULV3 898 aaPredicted RBP13.4□□□□□ -0.26
NEPRO-216ENST00000482229 HOXB3P14651 431 aaPredicted RBP13.39□□□□□ -0.27
NEPRO-216ENST00000482229 G3V3G9 751 aa13.34□□□□□ -0.27
NEPRO-216ENST00000482229 HOXB1P14653 301 aaPredicted RBP13.3□□□□□ -0.28
NEPRO-216ENST00000482229 EFCAB3Q8N7B9 438 aa13.26□□□□□ -0.29
NEPRO-216ENST00000482229 DOK7Q18PE1 504 aa13.25□□□□□ -0.29
NEPRO-216ENST00000482229 ZNF710Q8N1W2 664 aa13.25□□□□□ -0.29
NEPRO-216ENST00000482229 TRIM41Q8WV44 630 aa13.25□□□□□ -0.29
NEPRO-216ENST00000482229 ERBB3P21860 1342 aa13.18□□□□□ -0.3
NEPRO-216ENST00000482229 TMEM92Q6UXU6 159 aa13.16□□□□□ -0.3
NEPRO-216ENST00000482229 MICALL2Q8IY33 904 aa13.16□□□□□ -0.3
NEPRO-216ENST00000482229 RIMBP2O15034 1052 aa13.15□□□□□ -0.3
NEPRO-216ENST00000482229 SOX12O15370 315 aa13.13□□□□□ -0.31
NEPRO-216ENST00000482229 ZSWIM6Q9HCJ5 1215 aa13.12□□□□□ -0.31
NEPRO-216ENST00000482229 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
NEPRO-216ENST00000482229 MS4A4AQ96JQ5 239 aa13.1□□□□□ -0.31
NEPRO-216ENST00000482229 RIOK3O14730 519 aaKnown RBP13.09□□□□□ -0.31
NEPRO-216ENST00000482229 RNF25Q96BH1 459 aaPredicted RBP13.09□□□□□ -0.31
NEPRO-216ENST00000482229 GPR153Q6NV75 609 aa13.08□□□□□ -0.32
NEPRO-216ENST00000482229 ZNF687Q8N1G0 1237 aa13.06□□□□□ -0.32
NEPRO-216ENST00000482229 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms