RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
CBX3-207ENST00000481300 NUBP1P53384 320 aa11.07□□□□□ -0.64
CBX3-207ENST00000481300 VASPP50552 380 aaPredicted RBP11.05□□□□□ -0.64
CBX3-207ENST00000481300 MS4A3Q96HJ5 214 aa11.05□□□□□ -0.64
CBX3-207ENST00000481300 KIF12Q96FN5 646 aa11.03□□□□□ -0.64
CBX3-207ENST00000481300 MAP3K13O43283 966 aa10.97□□□□□ -0.65
CBX3-207ENST00000481300 LHX8Q68G74 356 aa10.97□□□□□ -0.65
CBX3-207ENST00000481300 FAM212AQ96EL1 285 aa10.95□□□□□ -0.66
CBX3-207ENST00000481300 PELP1Q8IZL8 1130 aaKnown RBP10.94□□□□□ -0.66
CBX3-207ENST00000481300 ASTLQ6HA08 431 aaPredicted RBP10.93□□□□□ -0.66
CBX3-207ENST00000481300 TRPC6Q9Y210 931 aa10.93□□□□□ -0.66
CBX3-207ENST00000481300 KLHL34Q8N239 644 aa10.92□□□□□ -0.66
CBX3-207ENST00000481300 ATMINO43313 823 aaPredicted RBP10.91□□□□□ -0.66
CBX3-207ENST00000481300 IFNLR1Q8IU57 520 aaPredicted RBP10.89□□□□□ -0.67
CBX3-207ENST00000481300 DCAF8Q5TAQ9 597 aa10.88□□□□□ -0.67
CBX3-207ENST00000481300 BMP2KQ9NSY1 1161 aaPredicted RBP10.87□□□□□ -0.67
CBX3-207ENST00000481300 PCDHB13Q9Y5F0 798 aa10.87□□□□□ -0.67
CBX3-207ENST00000481300 ATN1P54259 1190 aaPredicted RBP10.86□□□□□ -0.67
CBX3-207ENST00000481300 SGIP1Q9BQI5 828 aa10.86□□□□□ -0.67
CBX3-207ENST00000481300 IFNL1Q8IU54 200 aa10.84□□□□□ -0.67
CBX3-207ENST00000481300 TIE1P35590 1138 aa10.83□□□□□ -0.68
CBX3-207ENST00000481300 PYGBP11216 843 aa10.82□□□□□ -0.68
CBX3-207ENST00000481300 POTEB2H3BUK9 544 aa10.81□□□□□ -0.68
CBX3-207ENST00000481300 METRNQ9UJH8 293 aa10.81□□□□□ -0.68
CBX3-207ENST00000481300 TTLL13PA6NNM8 815 aa10.8□□□□□ -0.68
CBX3-207ENST00000481300 SLC39A7Q92504 469 aa10.79□□□□□ -0.68
CBX3-207ENST00000481300 SPOCK2Q92563 424 aa10.79□□□□□ -0.68
CBX3-207ENST00000481300 C7P10643 843 aa10.78□□□□□ -0.68
CBX3-207ENST00000481300 GSE1Q14687 1217 aa10.78□□□□□ -0.68
CBX3-207ENST00000481300 PCDHB8Q9UN66 801 aa10.74□□□□□ -0.69
CBX3-207ENST00000481300 POTEFA5A3E0 1075 aa10.72□□□□□ -0.69
CBX3-207ENST00000481300 OTUD5Q96G74 571 aa10.72□□□□□ -0.69
CBX3-207ENST00000481300 TRIM35Q9UPQ4 493 aa10.72□□□□□ -0.69
CBX3-207ENST00000481300 POTEJP0CG39 1038 aa10.71□□□□□ -0.69
CBX3-207ENST00000481300 TMEM106CQ9BVX2 250 aa10.71□□□□□ -0.69
CBX3-207ENST00000481300 CHRM1P11229 460 aaPredicted RBP10.7□□□□□ -0.7
CBX3-207ENST00000481300 CIZ1Q9ULV3 898 aaPredicted RBP10.69□□□□□ -0.7
CBX3-207ENST00000481300 COLQQ9Y215 455 aaPredicted RBP10.67□□□□□ -0.7
CBX3-207ENST00000481300 IER5LQ5T953 404 aa10.65□□□□□ -0.7
CBX3-207ENST00000481300 ZNF467Q7Z7K2 595 aaPredicted RBP10.65□□□□□ -0.7
CBX3-207ENST00000481300 SEC24BO95487 1268 aa10.61□□□□□ -0.71
CBX3-207ENST00000481300 IRX5P78411 483 aaPredicted RBP10.58□□□□□ -0.72
CBX3-207ENST00000481300 PSEN1P49768 467 aa10.57□□□□□ -0.72
CBX3-207ENST00000481300 MAMSTRQ6ZN01 415 aa10.56□□□□□ -0.72
CBX3-207ENST00000481300 PDAP1Q13442 181 aaKnown RBP10.54□□□□□ -0.72
CBX3-207ENST00000481300 TRIM41Q8WV44 630 aa10.54□□□□□ -0.72
CBX3-207ENST00000481300 PLCG2P16885 1265 aa10.53□□□□□ -0.72
CBX3-207ENST00000481300 SCUBE2Q9NQ36 999 aa10.52□□□□□ -0.73
CBX3-207ENST00000481300 OCEL1Q9H607 264 aa10.51□□□□□ -0.73
CBX3-207ENST00000481300 RNF25Q96BH1 459 aaPredicted RBP10.48□□□□□ -0.73
CBX3-207ENST00000481300 GOLGA2Q08379 1002 aa10.47□□□□□ -0.73
CBX3-207ENST00000481300 PDCD7Q8N8D1 485 aaKnown RBP10.47□□□□□ -0.73
CBX3-207ENST00000481300 MKRN3Q13064 507 aaKnown RBP10.46□□□□□ -0.73
CBX3-207ENST00000481300 CABP2Q9NPB3 220 aa10.44□□□□□ -0.74
CBX3-207ENST00000481300 RIOK3O14730 519 aaKnown RBP10.42□□□□□ -0.74
CBX3-207ENST00000481300 ILDR1Q86SU0 546 aaPredicted RBP10.42□□□□□ -0.74
CBX3-207ENST00000481300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.42□□□□□ -0.747e-12■■■□□ 17.3
CBX3-207ENST00000481300 LCE2DQ5TA82 110 aaPredicted RBP10.37□□□□□ -0.75
CBX3-207ENST00000481300 SLAIN1Q8ND83 568 aa10.37□□□□□ -0.75
CBX3-207ENST00000481300 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.36□□□□□ -0.75
CBX3-207ENST00000481300 VGFO15240 615 aaPredicted RBP10.36□□□□□ -0.75
CBX3-207ENST00000481300 PKD2Q13563 968 aa10.36□□□□□ -0.75
CBX3-207ENST00000481300 ZFP91Q96JP5 570 aaPredicted RBP10.36□□□□□ -0.75
CBX3-207ENST00000481300 DPY19L2Q6NUT2 758 aa10.35□□□□□ -0.75
CBX3-207ENST00000481300 EFCAB3Q8N7B9 438 aa10.35□□□□□ -0.75
CBX3-207ENST00000481300 ECM2O94769 699 aaPredicted RBP10.33□□□□□ -0.76
CBX3-207ENST00000481300 FAM163AQ96GL9 167 aaPredicted RBP10.33□□□□□ -0.76
CBX3-207ENST00000481300 L3MBTL3Q96JM7 780 aaPredicted RBP10.32□□□□□ -0.76
CBX3-207ENST00000481300 POTEMA6NI47 508 aa10.31□□□□□ -0.76
CBX3-207ENST00000481300 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.31□□□□□ -0.76
CBX3-207ENST00000481300 POTEGQ6S5H5 508 aa10.29□□□□□ -0.76
CBX3-207ENST00000481300 RGL2O15211 777 aa10.28□□□□□ -0.76
CBX3-207ENST00000481300 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.77
CBX3-207ENST00000481300 C3orf67Q6ZVT6 689 aa10.27□□□□□ -0.77
CBX3-207ENST00000481300 BCL11BQ9C0K0 894 aaPredicted RBP10.26□□□□□ -0.77
CBX3-207ENST00000481300 BOLA1Q9Y3E2 137 aa10.25□□□□□ -0.77
CBX3-207ENST00000481300 SOX12O15370 315 aa10.24□□□□□ -0.77
CBX3-207ENST00000481300 MS4A4AQ96JQ5 239 aa10.23□□□□□ -0.77
CBX3-207ENST00000481300 TAOK2Q9UL54 1235 aa10.23□□□□□ -0.77
CBX3-207ENST00000481300 PHF8Q9UPP1 1060 aa10.23□□□□□ -0.77
CBX3-207ENST00000481300 STK24Q9Y6E0 443 aa10.22□□□□□ -0.77
CBX3-207ENST00000481300 STK25O00506 426 aa10.21□□□□□ -0.77
CBX3-207ENST00000481300 TMEM121BQ9BXQ6 578 aaPredicted RBP10.21□□□□□ -0.77
CBX3-207ENST00000481300 ST18O60284 1047 aa10.2□□□□□ -0.78
CBX3-207ENST00000481300 RTN4Q9NQC3 1192 aaKnown RBP10.2□□□□□ -0.78
CBX3-207ENST00000481300 G3V3G9 751 aa10.19□□□□□ -0.78
CBX3-207ENST00000481300 FBXO22Q8NEZ5 403 aa10.17□□□□□ -0.78
CBX3-207ENST00000481300 SNPHO15079 494 aa10.16□□□□□ -0.78
CBX3-207ENST00000481300 MICALL2Q8IY33 904 aa10.16□□□□□ -0.78
CBX3-207ENST00000481300 MFRPQ9BY79 579 aa10.16□□□□□ -0.78
CBX3-207ENST00000481300 NLRP6P59044 892 aa10.14□□□□□ -0.79
CBX3-207ENST00000481300 TMEM92Q6UXU6 159 aa10.11□□□□□ -0.79
CBX3-207ENST00000481300 PCDH10Q9P2E7 1040 aa10.09□□□□□ -0.79
CBX3-207ENST00000481300 HOXB3P14651 431 aaPredicted RBP10.08□□□□□ -0.8
CBX3-207ENST00000481300 MARVELD3Q96A59 401 aa10.07□□□□□ -0.8
CBX3-207ENST00000481300 HS6ST3Q8IZP7 471 aa10.05□□□□□ -0.8
CBX3-207ENST00000481300 PLSCR2Q9NRY7 297 aa10.05□□□□□ -0.8
CBX3-207ENST00000481300 CDAN1Q8IWY9 1227 aa10.03□□□□□ -0.8
CBX3-207ENST00000481300 PPP1R37O75864 691 aa10□□□□□ -0.81
CBX3-207ENST00000481300 CHGAP10645 457 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms