RNA–Protein interactions for RNA: ENST00000481154.1

PTPN12-211, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-211ENST00000481154 ZBTB47Q9UFB7 747 aaPredicted RBP15.13■□□□□ 0.01
PTPN12-211ENST00000481154 RASEFQ8IZ41 740 aa15.11■□□□□ 0.01
PTPN12-211ENST00000481154 NUBP1P53384 320 aa15.06■□□□□ 0
PTPN12-211ENST00000481154 PELP1Q8IZL8 1130 aaKnown RBP15.06■□□□□ 0
PTPN12-211ENST00000481154 KLHL34Q8N239 644 aa15.06■□□□□ 0
PTPN12-211ENST00000481154 POTEB2H3BUK9 544 aa15.05■□□□□ -0
PTPN12-211ENST00000481154 MS4A3Q96HJ5 214 aa15.04■□□□□ -0
PTPN12-211ENST00000481154 IFNLR1Q8IU57 520 aaPredicted RBP15.01□□□□□ -0.01
PTPN12-211ENST00000481154 CCDC61Q9Y6R9 512 aa15□□□□□ -0.01
PTPN12-211ENST00000481154 OTUD5Q96G74 571 aa14.97□□□□□ -0.01
PTPN12-211ENST00000481154 ASTLQ6HA08 431 aaPredicted RBP14.94□□□□□ -0.02
PTPN12-211ENST00000481154 FAM212AQ96EL1 285 aa14.94□□□□□ -0.02
PTPN12-211ENST00000481154 ATMINO43313 823 aaPredicted RBP14.92□□□□□ -0.02
PTPN12-211ENST00000481154 DCAF8Q5TAQ9 597 aa14.89□□□□□ -0.03
PTPN12-211ENST00000481154 KIF12Q96FN5 646 aa14.88□□□□□ -0.03
PTPN12-211ENST00000481154 SPOCK2Q92563 424 aa14.86□□□□□ -0.03
PTPN12-211ENST00000481154 METRNQ9UJH8 293 aa14.85□□□□□ -0.03
PTPN12-211ENST00000481154 TRPC6Q9Y210 931 aa14.84□□□□□ -0.03
PTPN12-211ENST00000481154 MAP3K13O43283 966 aa14.83□□□□□ -0.04
PTPN12-211ENST00000481154 POTEJP0CG39 1038 aa14.83□□□□□ -0.04
PTPN12-211ENST00000481154 ATN1P54259 1190 aaPredicted RBP14.81□□□□□ -0.04
PTPN12-211ENST00000481154 SLC39A7Q92504 469 aa14.79□□□□□ -0.04
PTPN12-211ENST00000481154 C7P10643 843 aa14.78□□□□□ -0.04
PTPN12-211ENST00000481154 PYGBP11216 843 aa14.78□□□□□ -0.04
PTPN12-211ENST00000481154 BMP2KQ9NSY1 1161 aaPredicted RBP14.77□□□□□ -0.05
PTPN12-211ENST00000481154 GSE1Q14687 1217 aa14.75□□□□□ -0.05
PTPN12-211ENST00000481154 CIZ1Q9ULV3 898 aaPredicted RBP14.74□□□□□ -0.05
PTPN12-211ENST00000481154 PCDHB13Q9Y5F0 798 aa14.74□□□□□ -0.05
PTPN12-211ENST00000481154 POTEFA5A3E0 1075 aa14.71□□□□□ -0.05
PTPN12-211ENST00000481154 IFNL1Q8IU54 200 aa14.68□□□□□ -0.06
PTPN12-211ENST00000481154 TIE1P35590 1138 aa14.66□□□□□ -0.06
PTPN12-211ENST00000481154 SGIP1Q9BQI5 828 aa14.65□□□□□ -0.06
PTPN12-211ENST00000481154 TTLL13PA6NNM8 815 aa14.62□□□□□ -0.07
PTPN12-211ENST00000481154 PCDHB8Q9UN66 801 aa14.62□□□□□ -0.07
PTPN12-211ENST00000481154 POTEMA6NI47 508 aa14.57□□□□□ -0.08
PTPN12-211ENST00000481154 COLQQ9Y215 455 aaPredicted RBP14.57□□□□□ -0.08
PTPN12-211ENST00000481154 MAMSTRQ6ZN01 415 aa14.56□□□□□ -0.08
PTPN12-211ENST00000481154 PLSCR2Q9NRY7 297 aa14.56□□□□□ -0.08
PTPN12-211ENST00000481154 CHRM1P11229 460 aaPredicted RBP14.55□□□□□ -0.08
PTPN12-211ENST00000481154 POTEGQ6S5H5 508 aa14.54□□□□□ -0.08
PTPN12-211ENST00000481154 LCE2DQ5TA82 110 aaPredicted RBP14.53□□□□□ -0.08
PTPN12-211ENST00000481154 TMEM106CQ9BVX2 250 aa14.51□□□□□ -0.09
PTPN12-211ENST00000481154 TRIM35Q9UPQ4 493 aa14.51□□□□□ -0.09
PTPN12-211ENST00000481154 ZNF467Q7Z7K2 595 aaPredicted RBP14.5□□□□□ -0.09
PTPN12-211ENST00000481154 SCUBE2Q9NQ36 999 aa14.49□□□□□ -0.09
PTPN12-211ENST00000481154 TRIM41Q8WV44 630 aa14.45□□□□□ -0.1
PTPN12-211ENST00000481154 SEC24BO95487 1268 aa14.44□□□□□ -0.1
PTPN12-211ENST00000481154 IER5LQ5T953 404 aa14.42□□□□□ -0.1
PTPN12-211ENST00000481154 PSEN1P49768 467 aa14.4□□□□□ -0.1
PTPN12-211ENST00000481154 FAM163AQ96GL9 167 aaPredicted RBP14.4□□□□□ -0.1
PTPN12-211ENST00000481154 RNF25Q96BH1 459 aaPredicted RBP14.38□□□□□ -0.11
PTPN12-211ENST00000481154 PKD2Q13563 968 aa14.37□□□□□ -0.11
PTPN12-211ENST00000481154 PDAP1Q13442 181 aaKnown RBP14.36□□□□□ -0.11
PTPN12-211ENST00000481154 ECM2O94769 699 aaPredicted RBP14.34□□□□□ -0.11
PTPN12-211ENST00000481154 RIOK3O14730 519 aaKnown RBP14.31□□□□□ -0.12
PTPN12-211ENST00000481154 IRX5P78411 483 aaPredicted RBP14.31□□□□□ -0.12
PTPN12-211ENST00000481154 GOLGA2Q08379 1002 aa14.26□□□□□ -0.13
PTPN12-211ENST00000481154 PLCG2P16885 1265 aa14.25□□□□□ -0.13
PTPN12-211ENST00000481154 CABP2Q9NPB3 220 aa14.25□□□□□ -0.13
PTPN12-211ENST00000481154 PCDH10Q9P2E7 1040 aa14.25□□□□□ -0.13
PTPN12-211ENST00000481154 RGL2O15211 777 aa14.24□□□□□ -0.13
PTPN12-211ENST00000481154 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.23□□□□□ -0.13
PTPN12-211ENST00000481154 ZFP91Q96JP5 570 aaPredicted RBP14.23□□□□□ -0.13
PTPN12-211ENST00000481154 VGFO15240 615 aaPredicted RBP14.21□□□□□ -0.13
PTPN12-211ENST00000481154 MKRN3Q13064 507 aaKnown RBP14.21□□□□□ -0.13
PTPN12-211ENST00000481154 SLAIN1Q8ND83 568 aa14.21□□□□□ -0.13
PTPN12-211ENST00000481154 OCEL1Q9H607 264 aa14.18□□□□□ -0.14
PTPN12-211ENST00000481154 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.14□□□□□ -0.159e-8■■■□□ 18.1
PTPN12-211ENST00000481154 EFCAB3Q8N7B9 438 aa14.13□□□□□ -0.15
PTPN12-211ENST00000481154 ST18O60284 1047 aa14.12□□□□□ -0.15
PTPN12-211ENST00000481154 PDCD7Q8N8D1 485 aaKnown RBP14.12□□□□□ -0.15
PTPN12-211ENST00000481154 BCL11BQ9C0K0 894 aaPredicted RBP14.11□□□□□ -0.15
PTPN12-211ENST00000481154 TAOK2Q9UL54 1235 aa14.09□□□□□ -0.15
PTPN12-211ENST00000481154 STK24Q9Y6E0 443 aa14.09□□□□□ -0.15
PTPN12-211ENST00000481154 STK25O00506 426 aa14.08□□□□□ -0.16
PTPN12-211ENST00000481154 CDAN1Q8IWY9 1227 aa14.05□□□□□ -0.16
PTPN12-211ENST00000481154 DPY19L2Q6NUT2 758 aa14.04□□□□□ -0.16
PTPN12-211ENST00000481154 ILDR1Q86SU0 546 aaPredicted RBP14.04□□□□□ -0.16
PTPN12-211ENST00000481154 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.01□□□□□ -0.17
PTPN12-211ENST00000481154 PHF8Q9UPP1 1060 aa13.98□□□□□ -0.17
PTPN12-211ENST00000481154 SOX12O15370 315 aa13.95□□□□□ -0.18
PTPN12-211ENST00000481154 L3MBTL3Q96JM7 780 aaPredicted RBP13.94□□□□□ -0.18
PTPN12-211ENST00000481154 MS4A4AQ96JQ5 239 aa13.93□□□□□ -0.18
PTPN12-211ENST00000481154 CHGAP10645 457 aaKnown RBP13.91□□□□□ -0.18
PTPN12-211ENST00000481154 MFRPQ9BY79 579 aa13.9□□□□□ -0.18
PTPN12-211ENST00000481154 C3orf67Q6ZVT6 689 aa13.89□□□□□ -0.19
PTPN12-211ENST00000481154 MARVELD3Q96A59 401 aa13.89□□□□□ -0.19
PTPN12-211ENST00000481154 TMEM121BQ9BXQ6 578 aaPredicted RBP13.89□□□□□ -0.19
PTPN12-211ENST00000481154 BOLA1Q9Y3E2 137 aa13.89□□□□□ -0.19
PTPN12-211ENST00000481154 SNPHO15079 494 aa13.88□□□□□ -0.19
PTPN12-211ENST00000481154 DCAF8L2P0C7V8 631 aa13.88□□□□□ -0.19
PTPN12-211ENST00000481154 HS6ST3Q8IZP7 471 aa13.88□□□□□ -0.19
PTPN12-211ENST00000481154 NLRP6P59044 892 aa13.87□□□□□ -0.19
PTPN12-211ENST00000481154 FBXO22Q8NEZ5 403 aa13.87□□□□□ -0.19
PTPN12-211ENST00000481154 G3V3G9 751 aa13.86□□□□□ -0.19
PTPN12-211ENST00000481154 RTN4Q9NQC3 1192 aaKnown RBP13.85□□□□□ -0.19
PTPN12-211ENST00000481154 AMER1Q5JTC6 1135 aaPredicted RBP13.81□□□□□ -0.2
PTPN12-211ENST00000481154 MICALL2Q8IY33 904 aa13.81□□□□□ -0.2
PTPN12-211ENST00000481154 POTEB3A0JP26 581 aa13.76□□□□□ -0.21
PTPN12-211ENST00000481154 POTEBQ6S5H4 581 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms