RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 SPDYE4A6NLX3 237 aa9.22□□□□□ -0.93
R3HDM1-214ENST00000480793 MS4A3Q96HJ5 214 aa9.22□□□□□ -0.93
R3HDM1-214ENST00000480793 ATMINO43313 823 aaPredicted RBP9.2□□□□□ -0.94
R3HDM1-214ENST00000480793 MNX1P50219 401 aaPredicted RBP9.18□□□□□ -0.94
R3HDM1-214ENST00000480793 SCUBE2Q9NQ36 999 aa9.18□□□□□ -0.94
R3HDM1-214ENST00000480793 POTEJP0CG39 1038 aa9.15□□□□□ -0.94
R3HDM1-214ENST00000480793 FAM163AQ96GL9 167 aaPredicted RBP9.15□□□□□ -0.94
R3HDM1-214ENST00000480793 LCE2DQ5TA82 110 aaPredicted RBP9.1□□□□□ -0.95
R3HDM1-214ENST00000480793 CSRNP3Q8WYN3 585 aa9.1□□□□□ -0.95
R3HDM1-214ENST00000480793 TSPYL2Q9H2G4 693 aaPredicted RBP9.1□□□□□ -0.95
R3HDM1-214ENST00000480793 ATN1P54259 1190 aaPredicted RBP9.09□□□□□ -0.95
R3HDM1-214ENST00000480793 CCDC61Q9Y6R9 512 aa9.05□□□□□ -0.96
R3HDM1-214ENST00000480793 KIF12Q96FN5 646 aa9.02□□□□□ -0.97
R3HDM1-214ENST00000480793 BMP2KQ9NSY1 1161 aaPredicted RBP9.02□□□□□ -0.97
R3HDM1-214ENST00000480793 TIE1P35590 1138 aa9□□□□□ -0.97
R3HDM1-214ENST00000480793 POTEFA5A3E0 1075 aa8.99□□□□□ -0.97
R3HDM1-214ENST00000480793 SEC24BO95487 1268 aa8.99□□□□□ -0.97
R3HDM1-214ENST00000480793 CDAN1Q8IWY9 1227 aa8.98□□□□□ -0.97
R3HDM1-214ENST00000480793 PLEKHG5O94827 1062 aa8.96□□□□□ -0.98
R3HDM1-214ENST00000480793 TRPC6Q9Y210 931 aa8.96□□□□□ -0.98
R3HDM1-214ENST00000480793 MAP3K13O43283 966 aa8.95□□□□□ -0.98
R3HDM1-214ENST00000480793 COLQQ9Y215 455 aaPredicted RBP8.92□□□□□ -0.98
R3HDM1-214ENST00000480793 TTLL13PA6NNM8 815 aa8.91□□□□□ -0.98
R3HDM1-214ENST00000480793 IER5LQ5T953 404 aa8.9□□□□□ -0.98
R3HDM1-214ENST00000480793 SLAIN1Q8ND83 568 aa8.88□□□□□ -0.99
R3HDM1-214ENST00000480793 RASEFQ8IZ41 740 aa8.87□□□□□ -0.99
R3HDM1-214ENST00000480793 PROM2Q8N271 834 aa8.87□□□□□ -0.99
R3HDM1-214ENST00000480793 TRIM35Q9UPQ4 493 aa8.87□□□□□ -0.99
R3HDM1-214ENST00000480793 ST18O60284 1047 aa8.85□□□□□ -0.99
R3HDM1-214ENST00000480793 MIER1Q8N108 512 aa8.85□□□□□ -0.99
R3HDM1-214ENST00000480793 SGIP1Q9BQI5 828 aa8.84□□□□□ -0.99
R3HDM1-214ENST00000480793 PCDHB13Q9Y5F0 798 aa8.84□□□□□ -0.99
R3HDM1-214ENST00000480793 EHMT2Q96KQ7 1210 aa8.81□□□□□ -1
R3HDM1-214ENST00000480793 PLCG2P16885 1265 aa8.8□□□□□ -1
R3HDM1-214ENST00000480793 MMRN1Q13201 1228 aa8.77□□□□□ -1.01
R3HDM1-214ENST00000480793 PLCD3Q8N3E9 789 aa8.76□□□□□ -1.01
R3HDM1-214ENST00000480793 TMEM106CQ9BVX2 250 aa8.76□□□□□ -1.01
R3HDM1-214ENST00000480793 TMEM121BQ9BXQ6 578 aaPredicted RBP8.76□□□□□ -1.01
R3HDM1-214ENST00000480793 SPNS2Q8IVW8 549 aa8.75□□□□□ -1.01
R3HDM1-214ENST00000480793 ZBTB47Q9UFB7 747 aaPredicted RBP8.75□□□□□ -1.01
R3HDM1-214ENST00000480793 SNPHO15079 494 aa8.74□□□□□ -1.01
R3HDM1-214ENST00000480793 IFNL1Q8IU54 200 aa8.74□□□□□ -1.01
R3HDM1-214ENST00000480793 IRX5P78411 483 aaPredicted RBP8.7□□□□□ -1.02
R3HDM1-214ENST00000480793 FAM212AQ96EL1 285 aa8.7□□□□□ -1.02
R3HDM1-214ENST00000480793 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.69□□□□□ -1.02
R3HDM1-214ENST00000480793 NUBP1P53384 320 aa8.68□□□□□ -1.02
R3HDM1-214ENST00000480793 OCEL1Q9H607 264 aa8.67□□□□□ -1.02
R3HDM1-214ENST00000480793 MARVELD3Q96A59 401 aa8.66□□□□□ -1.02
R3HDM1-214ENST00000480793 EMP3P54852 163 aa8.61□□□□□ -1.03
R3HDM1-214ENST00000480793 C3orf67Q6ZVT6 689 aa8.59□□□□□ -1.03
R3HDM1-214ENST00000480793 PYGBP11216 843 aa8.55□□□□□ -1.04
R3HDM1-214ENST00000480793 DCAF8Q5TAQ9 597 aa8.55□□□□□ -1.04
R3HDM1-214ENST00000480793 L3MBTL3Q96JM7 780 aaPredicted RBP8.54□□□□□ -1.04
R3HDM1-214ENST00000480793 HS3ST6Q96QI5 342 aa8.54□□□□□ -1.04
R3HDM1-214ENST00000480793 GOLGA2Q08379 1002 aa8.53□□□□□ -1.04
R3HDM1-214ENST00000480793 PCDHB8Q9UN66 801 aa8.53□□□□□ -1.04
R3HDM1-214ENST00000480793 FAM205CA6NFA0 338 aa8.52□□□□□ -1.05
R3HDM1-214ENST00000480793 MKRN3Q13064 507 aaKnown RBP8.51□□□□□ -1.05
R3HDM1-214ENST00000480793 KRTAP3-3Q9BYR6 98 aa8.51□□□□□ -1.05
R3HDM1-214ENST00000480793 KRTAP3-2Q9BYR7 98 aa8.51□□□□□ -1.05
R3HDM1-214ENST00000480793 PDCD7Q8N8D1 485 aaKnown RBP8.5□□□□□ -1.05
R3HDM1-214ENST00000480793 POTEB3A0JP26 581 aa8.47□□□□□ -1.05
R3HDM1-214ENST00000480793 POTEBQ6S5H4 581 aa8.47□□□□□ -1.05
R3HDM1-214ENST00000480793 ZNF467Q7Z7K2 595 aaPredicted RBP8.46□□□□□ -1.06
R3HDM1-214ENST00000480793 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.45□□□□□ -1.068e-14■■□□□ 11.7
R3HDM1-214ENST00000480793 G3V3G9 751 aa8.41□□□□□ -1.06
R3HDM1-214ENST00000480793 GSE1Q14687 1217 aa8.39□□□□□ -1.07
R3HDM1-214ENST00000480793 ZNF710Q8N1W2 664 aa8.38□□□□□ -1.07
R3HDM1-214ENST00000480793 RNF166Q96A37 237 aaPredicted RBP8.38□□□□□ -1.07
R3HDM1-214ENST00000480793 PSEN1P49768 467 aa8.37□□□□□ -1.07
R3HDM1-214ENST00000480793 ERBB3P21860 1342 aa8.36□□□□□ -1.07
R3HDM1-214ENST00000480793 HOXB3P14651 431 aaPredicted RBP8.34□□□□□ -1.07
R3HDM1-214ENST00000480793 HOXB1P14653 301 aaPredicted RBP8.34□□□□□ -1.07
R3HDM1-214ENST00000480793 FKBP8Q14318 412 aa8.34□□□□□ -1.07
R3HDM1-214ENST00000480793 DOK7Q18PE1 504 aa8.34□□□□□ -1.07
R3HDM1-214ENST00000480793 FBXO3Q9UK99 471 aa8.33□□□□□ -1.08
R3HDM1-214ENST00000480793 BOLA1Q9Y3E2 137 aa8.33□□□□□ -1.08
R3HDM1-214ENST00000480793 CHRM1P11229 460 aaPredicted RBP8.32□□□□□ -1.08
R3HDM1-214ENST00000480793 KLHL34Q8N239 644 aa8.32□□□□□ -1.08
R3HDM1-214ENST00000480793 RIMBP2O15034 1052 aa8.31□□□□□ -1.08
R3HDM1-214ENST00000480793 DPY19L2Q6NUT2 758 aa8.31□□□□□ -1.08
R3HDM1-214ENST00000480793 ILDR1Q86SU0 546 aaPredicted RBP8.31□□□□□ -1.08
R3HDM1-214ENST00000480793 MYT1LQ9UL68 1186 aa8.31□□□□□ -1.08
R3HDM1-214ENST00000480793 PDAP1Q13442 181 aaKnown RBP8.3□□□□□ -1.08
R3HDM1-214ENST00000480793 CABP2Q9NPB3 220 aa8.28□□□□□ -1.08
R3HDM1-214ENST00000480793 VARS2Q5ST30 1063 aaKnown RBP8.27□□□□□ -1.09
R3HDM1-214ENST00000480793 PTGER2P43116 358 aa8.24□□□□□ -1.09
R3HDM1-214ENST00000480793 ZNF687Q8N1G0 1237 aa8.22□□□□□ -1.09
R3HDM1-214ENST00000480793 VASPP50552 380 aaPredicted RBP8.21□□□□□ -1.1
R3HDM1-214ENST00000480793 ZSWIM6Q9HCJ5 1215 aa8.21□□□□□ -1.1
R3HDM1-214ENST00000480793 CIZ1Q9ULV3 898 aaPredicted RBP8.15□□□□□ -1.1
R3HDM1-214ENST00000480793 ANKRD13DQ6ZTN6 518 aa8.14□□□□□ -1.11
R3HDM1-214ENST00000480793 GPR153Q6NV75 609 aa8.12□□□□□ -1.11
R3HDM1-214ENST00000480793 MICALL2Q8IY33 904 aa8.12□□□□□ -1.11
R3HDM1-214ENST00000480793 EFCAB3Q8N7B9 438 aa8.11□□□□□ -1.11
R3HDM1-214ENST00000480793 SPOCK2Q92563 424 aa8.1□□□□□ -1.11
R3HDM1-214ENST00000480793 TMEM92Q6UXU6 159 aa8.09□□□□□ -1.11
R3HDM1-214ENST00000480793 LSM11P83369 360 aaKnown RBP eCLIP8.07□□□□□ -1.12
R3HDM1-214ENST00000480793 ARSIQ5FYB1 569 aa8.07□□□□□ -1.12
R3HDM1-214ENST00000480793 ZNF316A6NFI3 1004 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms