RNA–Protein interactions for RNA: ENST00000480747.1

CKAP2-206, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 4

Gene CKAP2, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-206ENST00000480747 PHF12Q96QT6 1004 aa13.46□□□□□ -0.25
CKAP2-206ENST00000480747 NUBP1P53384 320 aa13.44□□□□□ -0.26
CKAP2-206ENST00000480747 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
CKAP2-206ENST00000480747 KLHL34Q8N239 644 aa13.39□□□□□ -0.27
CKAP2-206ENST00000480747 GALR2O43603 387 aaPredicted RBP13.37□□□□□ -0.27
CKAP2-206ENST00000480747 FAM212AQ96EL1 285 aa13.37□□□□□ -0.27
CKAP2-206ENST00000480747 PLCB2Q00722 1185 aa13.32□□□□□ -0.28
CKAP2-206ENST00000480747 IFNLR1Q8IU57 520 aaPredicted RBP13.32□□□□□ -0.28
CKAP2-206ENST00000480747 KIF12Q96FN5 646 aa13.31□□□□□ -0.28
CKAP2-206ENST00000480747 MS4A3Q96HJ5 214 aa13.31□□□□□ -0.28
CKAP2-206ENST00000480747 DCBLD2Q96PD2 775 aa13.31□□□□□ -0.28
CKAP2-206ENST00000480747 POTEIP0CG38 1075 aa13.29□□□□□ -0.28
CKAP2-206ENST00000480747 DCAF8Q5TAQ9 597 aa13.25□□□□□ -0.29
CKAP2-206ENST00000480747 SPOCK2Q92563 424 aa13.25□□□□□ -0.29
CKAP2-206ENST00000480747 MAP3K13O43283 966 aa13.24□□□□□ -0.29
CKAP2-206ENST00000480747 GSE1Q14687 1217 aa13.21□□□□□ -0.29
CKAP2-206ENST00000480747 SGIP1Q9BQI5 828 aa13.2□□□□□ -0.3
CKAP2-206ENST00000480747 PCDHB13Q9Y5F0 798 aa13.18□□□□□ -0.3
CKAP2-206ENST00000480747 PYGBP11216 843 aa13.14□□□□□ -0.31
CKAP2-206ENST00000480747 ASTLQ6HA08 431 aaPredicted RBP13.14□□□□□ -0.31
CKAP2-206ENST00000480747 HAP1P54257 671 aaPredicted RBP13.13□□□□□ -0.31
CKAP2-206ENST00000480747 ATMINO43313 823 aaPredicted RBP13.11□□□□□ -0.31
CKAP2-206ENST00000480747 TRPC6Q9Y210 931 aa13.11□□□□□ -0.31
CKAP2-206ENST00000480747 TIE1P35590 1138 aa13.1□□□□□ -0.31
CKAP2-206ENST00000480747 IFNL1Q8IU54 200 aa13.1□□□□□ -0.31
CKAP2-206ENST00000480747 PKD2Q13563 968 aa13.09□□□□□ -0.31
CKAP2-206ENST00000480747 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
CKAP2-206ENST00000480747 BMP2KQ9NSY1 1161 aaPredicted RBP13.08□□□□□ -0.32
CKAP2-206ENST00000480747 DCAF8L2P0C7V8 631 aa13.07□□□□□ -0.32
CKAP2-206ENST00000480747 CHRM1P11229 460 aaPredicted RBP13.06□□□□□ -0.32
CKAP2-206ENST00000480747 PELP1Q8IZL8 1130 aaKnown RBP13.06□□□□□ -0.32
CKAP2-206ENST00000480747 ATN1P54259 1190 aaPredicted RBP13.05□□□□□ -0.32
CKAP2-206ENST00000480747 TTLL13PA6NNM8 815 aa13.02□□□□□ -0.33
CKAP2-206ENST00000480747 LHX8Q68G74 356 aa13.02□□□□□ -0.33
CKAP2-206ENST00000480747 SLC39A7Q92504 469 aa13.01□□□□□ -0.33
CKAP2-206ENST00000480747 ZNF467Q7Z7K2 595 aaPredicted RBP13□□□□□ -0.33
CKAP2-206ENST00000480747 PCDHB8Q9UN66 801 aa13□□□□□ -0.33
CKAP2-206ENST00000480747 PRKCSHP14314 528 aaPredicted RBP12.99□□□□□ -0.33
CKAP2-206ENST00000480747 C7P10643 843 aa12.98□□□□□ -0.33
CKAP2-206ENST00000480747 TRIM41Q8WV44 630 aa12.98□□□□□ -0.33
CKAP2-206ENST00000480747 METRNQ9UJH8 293 aa12.98□□□□□ -0.33
CKAP2-206ENST00000480747 TMEM106CQ9BVX2 250 aa12.97□□□□□ -0.33
CKAP2-206ENST00000480747 BCANQ96GW7 911 aa12.94□□□□□ -0.34
CKAP2-206ENST00000480747 TRIM35Q9UPQ4 493 aa12.94□□□□□ -0.34
CKAP2-206ENST00000480747 VSIG10Q8N0Z9 540 aa12.9□□□□□ -0.34
CKAP2-206ENST00000480747 IER5LQ5T953 404 aa12.89□□□□□ -0.35
CKAP2-206ENST00000480747 TAOK2Q9UL54 1235 aa12.87□□□□□ -0.35
CKAP2-206ENST00000480747 PDAP1Q13442 181 aaKnown RBP12.86□□□□□ -0.35
CKAP2-206ENST00000480747 POTEB2H3BUK9 544 aa12.85□□□□□ -0.35
CKAP2-206ENST00000480747 PSEN1P49768 467 aa12.85□□□□□ -0.35
CKAP2-206ENST00000480747 KDM2AQ9Y2K7 1162 aa12.84□□□□□ -0.35
CKAP2-206ENST00000480747 POTEFA5A3E0 1075 aa12.82□□□□□ -0.36
CKAP2-206ENST00000480747 SEC24BO95487 1268 aa12.82□□□□□ -0.36
CKAP2-206ENST00000480747 COLQQ9Y215 455 aaPredicted RBP12.79□□□□□ -0.36
CKAP2-206ENST00000480747 GOLGA2Q08379 1002 aa12.77□□□□□ -0.37
CKAP2-206ENST00000480747 BBXQ8WY36 941 aaPredicted RBP12.77□□□□□ -0.37
CKAP2-206ENST00000480747 RNF25Q96BH1 459 aaPredicted RBP12.77□□□□□ -0.37
CKAP2-206ENST00000480747 RIOK3O14730 519 aaKnown RBP12.76□□□□□ -0.37
CKAP2-206ENST00000480747 ECM2O94769 699 aaPredicted RBP12.75□□□□□ -0.37
CKAP2-206ENST00000480747 IRX5P78411 483 aaPredicted RBP12.75□□□□□ -0.37
CKAP2-206ENST00000480747 PLCG2P16885 1265 aa12.74□□□□□ -0.37
CKAP2-206ENST00000480747 OTUD5Q96G74 571 aa12.74□□□□□ -0.37
CKAP2-206ENST00000480747 POTEJP0CG39 1038 aa12.73□□□□□ -0.37
CKAP2-206ENST00000480747 PAXIP1Q6ZW49 1069 aaPredicted RBP12.73□□□□□ -0.37
CKAP2-206ENST00000480747 MKRN3Q13064 507 aaKnown RBP12.72□□□□□ -0.37
CKAP2-206ENST00000480747 MAMSTRQ6ZN01 415 aa12.72□□□□□ -0.37
CKAP2-206ENST00000480747 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.72□□□□□ -0.37
CKAP2-206ENST00000480747 OCEL1Q9H607 264 aa12.71□□□□□ -0.37
CKAP2-206ENST00000480747 VGFO15240 615 aaPredicted RBP12.7□□□□□ -0.38
CKAP2-206ENST00000480747 RGL2O15211 777 aa12.69□□□□□ -0.38
CKAP2-206ENST00000480747 CFAP44Q96MT7 982 aa12.69□□□□□ -0.38
CKAP2-206ENST00000480747 CABP2Q9NPB3 220 aa12.69□□□□□ -0.38
CKAP2-206ENST00000480747 TPRNQ4KMQ1 711 aa12.68□□□□□ -0.38
CKAP2-206ENST00000480747 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
CKAP2-206ENST00000480747 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
CKAP2-206ENST00000480747 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
CKAP2-206ENST00000480747 PDCD7Q8N8D1 485 aaKnown RBP12.63□□□□□ -0.39
CKAP2-206ENST00000480747 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.63□□□□□ -0.396e-7■■■■□ 25.5
CKAP2-206ENST00000480747 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
CKAP2-206ENST00000480747 ILDR1Q86SU0 546 aaPredicted RBP12.6□□□□□ -0.39
CKAP2-206ENST00000480747 EFCAB3Q8N7B9 438 aa12.58□□□□□ -0.4
CKAP2-206ENST00000480747 SPRYD3Q8NCJ5 442 aa12.54□□□□□ -0.4
CKAP2-206ENST00000480747 BCL11BQ9C0K0 894 aaPredicted RBP12.54□□□□□ -0.4
CKAP2-206ENST00000480747 L3MBTL3Q96JM7 780 aaPredicted RBP12.52□□□□□ -0.41
CKAP2-206ENST00000480747 STK25O00506 426 aa12.51□□□□□ -0.41
CKAP2-206ENST00000480747 STK24Q9Y6E0 443 aa12.51□□□□□ -0.41
CKAP2-206ENST00000480747 SOX12O15370 315 aa12.5□□□□□ -0.41
CKAP2-206ENST00000480747 CHGAP10645 457 aaKnown RBP12.48□□□□□ -0.41
CKAP2-206ENST00000480747 DPY19L2Q6NUT2 758 aa12.48□□□□□ -0.41
CKAP2-206ENST00000480747 SLAIN1Q8ND83 568 aa12.47□□□□□ -0.41
CKAP2-206ENST00000480747 C3orf67Q6ZVT6 689 aa12.46□□□□□ -0.41
CKAP2-206ENST00000480747 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.46□□□□□ -0.41
CKAP2-206ENST00000480747 G3V3G9 751 aa12.44□□□□□ -0.42
CKAP2-206ENST00000480747 PHF8Q9UPP1 1060 aa12.43□□□□□ -0.42
CKAP2-206ENST00000480747 BOLA1Q9Y3E2 137 aa12.43□□□□□ -0.42
CKAP2-206ENST00000480747 DNAJC5Q9H3Z4 198 aa12.41□□□□□ -0.42
CKAP2-206ENST00000480747 NLRP6P59044 892 aa12.4□□□□□ -0.42
CKAP2-206ENST00000480747 MS4A4AQ96JQ5 239 aa12.4□□□□□ -0.42
CKAP2-206ENST00000480747 HS6ST3Q8IZP7 471 aa12.37□□□□□ -0.43
CKAP2-206ENST00000480747 FBXO22Q8NEZ5 403 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms