RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 PKD2Q13563 968 aa14.67□□□□□ -0.06
CALD1-219ENST00000480638 HAX1O00165 279 aa14.64□□□□□ -0.07
CALD1-219ENST00000480638 ZRANB1Q9UGI0 708 aa14.62□□□□□ -0.07
CALD1-219ENST00000480638 CCDC61Q9Y6R9 512 aa14.61□□□□□ -0.07
CALD1-219ENST00000480638 TRIM41Q8WV44 630 aa14.58□□□□□ -0.08
CALD1-219ENST00000480638 ECM2O94769 699 aaPredicted RBP14.56□□□□□ -0.08
CALD1-219ENST00000480638 EVX2Q03828 476 aa14.55□□□□□ -0.08
CALD1-219ENST00000480638 PYGBP11216 843 aa14.54□□□□□ -0.08
CALD1-219ENST00000480638 ZNF579Q8NAF0 562 aaKnown RBP14.52□□□□□ -0.09
CALD1-219ENST00000480638 CHRM1P11229 460 aaPredicted RBP14.5□□□□□ -0.09
CALD1-219ENST00000480638 PHF12Q96QT6 1004 aa14.49□□□□□ -0.09
CALD1-219ENST00000480638 KIF12Q96FN5 646 aa14.45□□□□□ -0.1
CALD1-219ENST00000480638 RGL2O15211 777 aa14.43□□□□□ -0.1
CALD1-219ENST00000480638 MAP3K13O43283 966 aa14.41□□□□□ -0.1
CALD1-219ENST00000480638 RNF25Q96BH1 459 aaPredicted RBP14.41□□□□□ -0.1
CALD1-219ENST00000480638 PCDHB13Q9Y5F0 798 aa14.38□□□□□ -0.11
CALD1-219ENST00000480638 SGIP1Q9BQI5 828 aa14.37□□□□□ -0.11
CALD1-219ENST00000480638 RIOK3O14730 519 aaKnown RBP14.34□□□□□ -0.11
CALD1-219ENST00000480638 ZNF467Q7Z7K2 595 aaPredicted RBP14.34□□□□□ -0.11
CALD1-219ENST00000480638 IFNL1Q8IU54 200 aa14.33□□□□□ -0.12
CALD1-219ENST00000480638 MS4A3Q96HJ5 214 aa14.33□□□□□ -0.12
CALD1-219ENST00000480638 CLCN6P51797 869 aa14.32□□□□□ -0.12
CALD1-219ENST00000480638 PCDHB8Q9UN66 801 aa14.32□□□□□ -0.12
CALD1-219ENST00000480638 GALR2O43603 387 aaPredicted RBP14.29□□□□□ -0.12
CALD1-219ENST00000480638 DCAF8L2P0C7V8 631 aa14.29□□□□□ -0.12
CALD1-219ENST00000480638 SP7Q8TDD2 431 aaPredicted RBP14.29□□□□□ -0.12
CALD1-219ENST00000480638 GABBR2O75899 941 aa14.26□□□□□ -0.13
CALD1-219ENST00000480638 VGFO15240 615 aaPredicted RBP14.25□□□□□ -0.13
CALD1-219ENST00000480638 TAOK2Q9UL54 1235 aa14.24□□□□□ -0.13
CALD1-219ENST00000480638 TRPC6Q9Y210 931 aa14.22□□□□□ -0.13
CALD1-219ENST00000480638 PDAP1Q13442 181 aaKnown RBP14.21□□□□□ -0.13
CALD1-219ENST00000480638 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
CALD1-219ENST00000480638 ZFP91Q96JP5 570 aaPredicted RBP14.19□□□□□ -0.14
CALD1-219ENST00000480638 PSEN1P49768 467 aa14.18□□□□□ -0.14
CALD1-219ENST00000480638 TIE1P35590 1138 aa14.14□□□□□ -0.15
CALD1-219ENST00000480638 STK25O00506 426 aa14.13□□□□□ -0.15
CALD1-219ENST00000480638 CHGAP10645 457 aaKnown RBP14.13□□□□□ -0.15
CALD1-219ENST00000480638 HS6ST3Q8IZP7 471 aa14.12□□□□□ -0.15
CALD1-219ENST00000480638 TMEM106CQ9BVX2 250 aa14.11□□□□□ -0.15
CALD1-219ENST00000480638 BCL11BQ9C0K0 894 aaPredicted RBP14.11□□□□□ -0.15
CALD1-219ENST00000480638 BMP2KQ9NSY1 1161 aaPredicted RBP14.11□□□□□ -0.15
CALD1-219ENST00000480638 TTLL13PA6NNM8 815 aa14.09□□□□□ -0.15
CALD1-219ENST00000480638 STK24Q9Y6E0 443 aa14.08□□□□□ -0.16
CALD1-219ENST00000480638 ASTLQ6HA08 431 aaPredicted RBP14.05□□□□□ -0.16
CALD1-219ENST00000480638 DCBLD2Q96PD2 775 aa14.04□□□□□ -0.16
CALD1-219ENST00000480638 ATMINO43313 823 aaPredicted RBP14.03□□□□□ -0.16
CALD1-219ENST00000480638 CABP2Q9NPB3 220 aa14.02□□□□□ -0.17
CALD1-219ENST00000480638 ATN1P54259 1190 aaPredicted RBP14.01□□□□□ -0.17
CALD1-219ENST00000480638 DNAJC5Q9H3Z4 198 aa14□□□□□ -0.17
CALD1-219ENST00000480638 TRIM35Q9UPQ4 493 aa13.99□□□□□ -0.17
CALD1-219ENST00000480638 POTEIP0CG38 1075 aa13.98□□□□□ -0.17
CALD1-219ENST00000480638 BBXQ8WY36 941 aaPredicted RBP13.96□□□□□ -0.17
CALD1-219ENST00000480638 GOLGA2Q08379 1002 aa13.95□□□□□ -0.18
CALD1-219ENST00000480638 EFCAB3Q8N7B9 438 aa13.94□□□□□ -0.18
CALD1-219ENST00000480638 NKX1-1Q15270 411 aaPredicted RBP13.92□□□□□ -0.18
CALD1-219ENST00000480638 PELP1Q8IZL8 1130 aaKnown RBP13.92□□□□□ -0.18
CALD1-219ENST00000480638 MKRN3Q13064 507 aaKnown RBP13.91□□□□□ -0.18
CALD1-219ENST00000480638 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.87□□□□□ -0.19
CALD1-219ENST00000480638 SOX12O15370 315 aa13.86□□□□□ -0.19
CALD1-219ENST00000480638 IER5LQ5T953 404 aa13.86□□□□□ -0.19
CALD1-219ENST00000480638 MFRPQ9BY79 579 aa13.85□□□□□ -0.19
CALD1-219ENST00000480638 SLC39A7Q92504 469 aa13.84□□□□□ -0.19
CALD1-219ENST00000480638 PHF8Q9UPP1 1060 aa13.83□□□□□ -0.2
CALD1-219ENST00000480638 NLRP6P59044 892 aa13.8□□□□□ -0.2
CALD1-219ENST00000480638 IRX5P78411 483 aaPredicted RBP13.8□□□□□ -0.2
CALD1-219ENST00000480638 FBXO22Q8NEZ5 403 aa13.8□□□□□ -0.2
CALD1-219ENST00000480638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.8□□□□□ -0.2
CALD1-219ENST00000480638 METRNQ9UJH8 293 aa13.8□□□□□ -0.2
CALD1-219ENST00000480638 C7P10643 843 aa13.79□□□□□ -0.2
CALD1-219ENST00000480638 ILDR1Q86SU0 546 aaPredicted RBP13.79□□□□□ -0.2
CALD1-219ENST00000480638 GTPBP6O43824 516 aaPredicted RBP13.78□□□□□ -0.2
CALD1-219ENST00000480638 PAXIP1Q6ZW49 1069 aaPredicted RBP13.77□□□□□ -0.21
CALD1-219ENST00000480638 RYDENQ9NUL5 291 aaKnown RBP13.77□□□□□ -0.21
CALD1-219ENST00000480638 SPRYD3Q8NCJ5 442 aa13.76□□□□□ -0.21
CALD1-219ENST00000480638 MS4A4AQ96JQ5 239 aa13.76□□□□□ -0.21
CALD1-219ENST00000480638 PDCD7Q8N8D1 485 aaKnown RBP13.75□□□□□ -0.21
CALD1-219ENST00000480638 CFAP44Q96MT7 982 aa13.75□□□□□ -0.21
CALD1-219ENST00000480638 OCEL1Q9H607 264 aa13.75□□□□□ -0.21
CALD1-219ENST00000480638 PLCG2P16885 1265 aa13.74□□□□□ -0.21
CALD1-219ENST00000480638 PLCB2Q00722 1185 aa13.74□□□□□ -0.21
CALD1-219ENST00000480638 COLQQ9Y215 455 aaPredicted RBP13.74□□□□□ -0.21
CALD1-219ENST00000480638 POTEFA5A3E0 1075 aa13.73□□□□□ -0.21
CALD1-219ENST00000480638 SEC24BO95487 1268 aa13.73□□□□□ -0.21
CALD1-219ENST00000480638 DPY19L2Q6NUT2 758 aa13.67□□□□□ -0.22
CALD1-219ENST00000480638 PPP1R37O75864 691 aa13.66□□□□□ -0.22
CALD1-219ENST00000480638 BOLA1Q9Y3E2 137 aa13.57□□□□□ -0.24
CALD1-219ENST00000480638 L3MBTL3Q96JM7 780 aaPredicted RBP13.56□□□□□ -0.24
CALD1-219ENST00000480638 MICALL2Q8IY33 904 aa13.55□□□□□ -0.24
CALD1-219ENST00000480638 POTEB2H3BUK9 544 aa13.54□□□□□ -0.24
CALD1-219ENST00000480638 G3V3G9 751 aa13.53□□□□□ -0.24
CALD1-219ENST00000480638 HAP1P54257 671 aaPredicted RBP13.53□□□□□ -0.24
CALD1-219ENST00000480638 TMEM121BQ9BXQ6 578 aaPredicted RBP13.53□□□□□ -0.24
CALD1-219ENST00000480638 TSHZ2Q9NRE2 1034 aa13.5□□□□□ -0.25
CALD1-219ENST00000480638 POTEJP0CG39 1038 aa13.49□□□□□ -0.25
CALD1-219ENST00000480638 CADPS2Q86UW7 1296 aa13.46□□□□□ -0.25
CALD1-219ENST00000480638 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
CALD1-219ENST00000480638 LHX8Q68G74 356 aa13.4□□□□□ -0.26
CALD1-219ENST00000480638 SLC24A1O60721 1099 aa13.39□□□□□ -0.27
CALD1-219ENST00000480638 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.39□□□□□ -0.27
CALD1-219ENST00000480638 MAMSTRQ6ZN01 415 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms