RNA–Protein interactions for RNA: ENST00000479977.6

VAV3-205, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-205ENST00000479977 RASEFQ8IZ41 740 aa11.82□□□□□ -0.52
VAV3-205ENST00000479977 PELP1Q8IZL8 1130 aaKnown RBP11.82□□□□□ -0.52
VAV3-205ENST00000479977 ATMINO43313 823 aaPredicted RBP11.78□□□□□ -0.52
VAV3-205ENST00000479977 KIF12Q96FN5 646 aa11.78□□□□□ -0.52
VAV3-205ENST00000479977 POTEB2H3BUK9 544 aa11.77□□□□□ -0.53
VAV3-205ENST00000479977 ASTLQ6HA08 431 aaPredicted RBP11.77□□□□□ -0.53
VAV3-205ENST00000479977 METRNQ9UJH8 293 aa11.76□□□□□ -0.53
VAV3-205ENST00000479977 MAP3K13O43283 966 aa11.74□□□□□ -0.53
VAV3-205ENST00000479977 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
VAV3-205ENST00000479977 SLC39A7Q92504 469 aa11.72□□□□□ -0.53
VAV3-205ENST00000479977 OTUD5Q96G74 571 aa11.72□□□□□ -0.53
VAV3-205ENST00000479977 ATN1P54259 1190 aaPredicted RBP11.71□□□□□ -0.53
VAV3-205ENST00000479977 TRPC6Q9Y210 931 aa11.71□□□□□ -0.53
VAV3-205ENST00000479977 C7P10643 843 aa11.69□□□□□ -0.54
VAV3-205ENST00000479977 BMP2KQ9NSY1 1161 aaPredicted RBP11.68□□□□□ -0.54
VAV3-205ENST00000479977 NUBP1P53384 320 aa11.67□□□□□ -0.54
VAV3-205ENST00000479977 FAM212AQ96EL1 285 aa11.65□□□□□ -0.54
VAV3-205ENST00000479977 PCDHB13Q9Y5F0 798 aa11.64□□□□□ -0.55
VAV3-205ENST00000479977 TIE1P35590 1138 aa11.63□□□□□ -0.55
VAV3-205ENST00000479977 FBXO3Q9UK99 471 aa11.61□□□□□ -0.55
VAV3-205ENST00000479977 TTLL13PA6NNM8 815 aa11.59□□□□□ -0.55
VAV3-205ENST00000479977 POTEJP0CG39 1038 aa11.58□□□□□ -0.56
VAV3-205ENST00000479977 SGIP1Q9BQI5 828 aa11.56□□□□□ -0.56
VAV3-205ENST00000479977 IFNL1Q8IU54 200 aa11.55□□□□□ -0.56
VAV3-205ENST00000479977 DCAF8Q5TAQ9 597 aa11.54□□□□□ -0.56
VAV3-205ENST00000479977 MAMSTRQ6ZN01 415 aa11.54□□□□□ -0.56
VAV3-205ENST00000479977 TRIM35Q9UPQ4 493 aa11.54□□□□□ -0.56
VAV3-205ENST00000479977 POTEFA5A3E0 1075 aa11.53□□□□□ -0.56
VAV3-205ENST00000479977 SEC24BO95487 1268 aa11.53□□□□□ -0.56
VAV3-205ENST00000479977 SCUBE2Q9NQ36 999 aa11.53□□□□□ -0.56
VAV3-205ENST00000479977 KLHL34Q8N239 644 aa11.51□□□□□ -0.57
VAV3-205ENST00000479977 PYGBP11216 843 aa11.5□□□□□ -0.57
VAV3-205ENST00000479977 VASPP50552 380 aaPredicted RBP11.5□□□□□ -0.57
VAV3-205ENST00000479977 TMEM106CQ9BVX2 250 aa11.49□□□□□ -0.57
VAV3-205ENST00000479977 COLQQ9Y215 455 aaPredicted RBP11.49□□□□□ -0.57
VAV3-205ENST00000479977 POTEMA6NI47 508 aa11.45□□□□□ -0.58
VAV3-205ENST00000479977 PLSCR2Q9NRY7 297 aa11.45□□□□□ -0.58
VAV3-205ENST00000479977 IER5LQ5T953 404 aa11.44□□□□□ -0.58
VAV3-205ENST00000479977 POTEGQ6S5H5 508 aa11.42□□□□□ -0.58
VAV3-205ENST00000479977 PCDHB8Q9UN66 801 aa11.41□□□□□ -0.58
VAV3-205ENST00000479977 PLCG2P16885 1265 aa11.39□□□□□ -0.59
VAV3-205ENST00000479977 FAM163AQ96GL9 167 aaPredicted RBP11.38□□□□□ -0.59
VAV3-205ENST00000479977 GSE1Q14687 1217 aa11.37□□□□□ -0.59
VAV3-205ENST00000479977 IRX5P78411 483 aaPredicted RBP11.31□□□□□ -0.6
VAV3-205ENST00000479977 LCE2DQ5TA82 110 aaPredicted RBP11.31□□□□□ -0.6
VAV3-205ENST00000479977 ZNF467Q7Z7K2 595 aaPredicted RBP11.3□□□□□ -0.6
VAV3-205ENST00000479977 SLAIN1Q8ND83 568 aa11.29□□□□□ -0.6
VAV3-205ENST00000479977 IFNLR1Q8IU57 520 aaPredicted RBP11.27□□□□□ -0.61
VAV3-205ENST00000479977 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
VAV3-205ENST00000479977 SPOCK2Q92563 424 aa11.26□□□□□ -0.61
VAV3-205ENST00000479977 OCEL1Q9H607 264 aa11.26□□□□□ -0.61
VAV3-205ENST00000479977 CIZ1Q9ULV3 898 aaPredicted RBP11.26□□□□□ -0.61
VAV3-205ENST00000479977 CHRM1P11229 460 aaPredicted RBP11.21□□□□□ -0.61
VAV3-205ENST00000479977 PSEN1P49768 467 aa11.21□□□□□ -0.61
VAV3-205ENST00000479977 MKRN3Q13064 507 aaKnown RBP11.21□□□□□ -0.61
VAV3-205ENST00000479977 PCDH10Q9P2E7 1040 aa11.18□□□□□ -0.62
VAV3-205ENST00000479977 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.17□□□□□ -0.62
VAV3-205ENST00000479977 PDAP1Q13442 181 aaKnown RBP11.15□□□□□ -0.62
VAV3-205ENST00000479977 PDCD7Q8N8D1 485 aaKnown RBP11.15□□□□□ -0.62
VAV3-205ENST00000479977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.14□□□□□ -0.63
VAV3-205ENST00000479977 ST18O60284 1047 aa11.13□□□□□ -0.63
VAV3-205ENST00000479977 C3orf67Q6ZVT6 689 aa11.13□□□□□ -0.63
VAV3-205ENST00000479977 CABP2Q9NPB3 220 aa11.11□□□□□ -0.63
VAV3-205ENST00000479977 L3MBTL3Q96JM7 780 aaPredicted RBP11.08□□□□□ -0.64
VAV3-205ENST00000479977 CDAN1Q8IWY9 1227 aa11.07□□□□□ -0.64
VAV3-205ENST00000479977 SNPHO15079 494 aa11.04□□□□□ -0.64
VAV3-205ENST00000479977 DPY19L2Q6NUT2 758 aa11.03□□□□□ -0.64
VAV3-205ENST00000479977 G3V3G9 751 aa11.01□□□□□ -0.65
VAV3-205ENST00000479977 TRIM41Q8WV44 630 aa11.01□□□□□ -0.65
VAV3-205ENST00000479977 MARVELD3Q96A59 401 aa11□□□□□ -0.65
VAV3-205ENST00000479977 TMEM121BQ9BXQ6 578 aaPredicted RBP10.99□□□□□ -0.65
VAV3-205ENST00000479977 ILDR1Q86SU0 546 aaPredicted RBP10.97□□□□□ -0.65
VAV3-205ENST00000479977 BOLA1Q9Y3E2 137 aa10.96□□□□□ -0.65
VAV3-205ENST00000479977 EFCAB3Q8N7B9 438 aa10.95□□□□□ -0.66
VAV3-205ENST00000479977 RIOK3O14730 519 aaKnown RBP10.91□□□□□ -0.66
VAV3-205ENST00000479977 EMP3P54852 163 aa10.91□□□□□ -0.66
VAV3-205ENST00000479977 RNF25Q96BH1 459 aaPredicted RBP10.91□□□□□ -0.66
VAV3-205ENST00000479977 PKD2Q13563 968 aa10.89□□□□□ -0.67
VAV3-205ENST00000479977 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.88□□□□□ -0.67
VAV3-205ENST00000479977 ZFP91Q96JP5 570 aaPredicted RBP10.88□□□□□ -0.67
VAV3-205ENST00000479977 VGFO15240 615 aaPredicted RBP10.86□□□□□ -0.67
VAV3-205ENST00000479977 RTN4Q9NQC3 1192 aaKnown RBP10.86□□□□□ -0.67
VAV3-205ENST00000479977 AMER1Q5JTC6 1135 aaPredicted RBP10.85□□□□□ -0.67
VAV3-205ENST00000479977 FAM205CA6NFA0 338 aa10.84□□□□□ -0.67
VAV3-205ENST00000479977 HS3ST6Q96QI5 342 aa10.82□□□□□ -0.68
VAV3-205ENST00000479977 MICALL2Q8IY33 904 aa10.81□□□□□ -0.68
VAV3-205ENST00000479977 ZNF710Q8N1W2 664 aa10.81□□□□□ -0.68
VAV3-205ENST00000479977 PHF8Q9UPP1 1060 aa10.81□□□□□ -0.68
VAV3-205ENST00000479977 SOX12O15370 315 aa10.8□□□□□ -0.68
VAV3-205ENST00000479977 HOXB3P14651 431 aaPredicted RBP10.8□□□□□ -0.68
VAV3-205ENST00000479977 ECM2O94769 699 aaPredicted RBP10.78□□□□□ -0.68
VAV3-205ENST00000479977 SPNS2Q8IVW8 549 aa10.78□□□□□ -0.68
VAV3-205ENST00000479977 POTEB3A0JP26 581 aa10.77□□□□□ -0.69
VAV3-205ENST00000479977 DOK7Q18PE1 504 aa10.77□□□□□ -0.69
VAV3-205ENST00000479977 POTEBQ6S5H4 581 aa10.77□□□□□ -0.69
VAV3-205ENST00000479977 MS4A4AQ96JQ5 239 aa10.77□□□□□ -0.69
VAV3-205ENST00000479977 MMRN1Q13201 1228 aa10.76□□□□□ -0.69
VAV3-205ENST00000479977 BCL11BQ9C0K0 894 aaPredicted RBP10.76□□□□□ -0.69
VAV3-205ENST00000479977 TMEM92Q6UXU6 159 aa10.74□□□□□ -0.69
VAV3-205ENST00000479977 STK24Q9Y6E0 443 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms