RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 CHRM1P11229 460 aaPredicted RBP14.65□□□□□ -0.06
CCDC58-204ENST00000479414 CD44P16070 742 aaKnown RBP14.63□□□□□ -0.07
CCDC58-204ENST00000479414 C19orf67A6NJJ6 358 aa14.62□□□□□ -0.07
CCDC58-204ENST00000479414 CCDC61Q9Y6R9 512 aa14.62□□□□□ -0.07
CCDC58-204ENST00000479414 RGL2O15211 777 aa14.59□□□□□ -0.07
CCDC58-204ENST00000479414 PYGBP11216 843 aa14.56□□□□□ -0.08
CCDC58-204ENST00000479414 ZRANB1Q9UGI0 708 aa14.56□□□□□ -0.08
CCDC58-204ENST00000479414 POTEHQ6S545 545 aa14.55□□□□□ -0.08
CCDC58-204ENST00000479414 RNF25Q96BH1 459 aaPredicted RBP14.53□□□□□ -0.08
CCDC58-204ENST00000479414 HAX1O00165 279 aa14.49□□□□□ -0.09
CCDC58-204ENST00000479414 ZNF579Q8NAF0 562 aaKnown RBP14.49□□□□□ -0.09
CCDC58-204ENST00000479414 RIOK3O14730 519 aaKnown RBP14.48□□□□□ -0.09
CCDC58-204ENST00000479414 DCAF8L2P0C7V8 631 aa14.48□□□□□ -0.09
CCDC58-204ENST00000479414 KIF12Q96FN5 646 aa14.46□□□□□ -0.09
CCDC58-204ENST00000479414 PHF12Q96QT6 1004 aa14.44□□□□□ -0.1
CCDC58-204ENST00000479414 SGIP1Q9BQI5 828 aa14.44□□□□□ -0.1
CCDC58-204ENST00000479414 ZNF467Q7Z7K2 595 aaPredicted RBP14.42□□□□□ -0.1
CCDC58-204ENST00000479414 MAP3K13O43283 966 aa14.41□□□□□ -0.1
CCDC58-204ENST00000479414 TAOK2Q9UL54 1235 aa14.41□□□□□ -0.1
CCDC58-204ENST00000479414 EVX2Q03828 476 aa14.4□□□□□ -0.1
CCDC58-204ENST00000479414 VGFO15240 615 aaPredicted RBP14.39□□□□□ -0.11
CCDC58-204ENST00000479414 PCDHB13Q9Y5F0 798 aa14.39□□□□□ -0.11
CCDC58-204ENST00000479414 PCDHB8Q9UN66 801 aa14.36□□□□□ -0.11
CCDC58-204ENST00000479414 IFNL1Q8IU54 200 aa14.35□□□□□ -0.11
CCDC58-204ENST00000479414 HS6ST3Q8IZP7 471 aa14.32□□□□□ -0.12
CCDC58-204ENST00000479414 CHGAP10645 457 aaKnown RBP14.31□□□□□ -0.12
CCDC58-204ENST00000479414 CLCN6P51797 869 aa14.31□□□□□ -0.12
CCDC58-204ENST00000479414 PDAP1Q13442 181 aaKnown RBP14.31□□□□□ -0.12
CCDC58-204ENST00000479414 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.29□□□□□ -0.12
CCDC58-204ENST00000479414 MS4A3Q96HJ5 214 aa14.29□□□□□ -0.12
CCDC58-204ENST00000479414 ZFP91Q96JP5 570 aaPredicted RBP14.29□□□□□ -0.12
CCDC58-204ENST00000479414 STK25O00506 426 aa14.25□□□□□ -0.13
CCDC58-204ENST00000479414 PSEN1P49768 467 aa14.25□□□□□ -0.13
CCDC58-204ENST00000479414 BBXQ8WY36 941 aaPredicted RBP14.25□□□□□ -0.13
CCDC58-204ENST00000479414 DNAJC5Q9H3Z4 198 aa14.24□□□□□ -0.13
CCDC58-204ENST00000479414 BCL11BQ9C0K0 894 aaPredicted RBP14.22□□□□□ -0.13
CCDC58-204ENST00000479414 GALR2O43603 387 aaPredicted RBP14.2□□□□□ -0.14
CCDC58-204ENST00000479414 STK24Q9Y6E0 443 aa14.19□□□□□ -0.14
CCDC58-204ENST00000479414 TRPC6Q9Y210 931 aa14.18□□□□□ -0.14
CCDC58-204ENST00000479414 GABBR2O75899 941 aa14.15□□□□□ -0.14
CCDC58-204ENST00000479414 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.15□□□□□ -0.14
CCDC58-204ENST00000479414 TIE1P35590 1138 aa14.14□□□□□ -0.15
CCDC58-204ENST00000479414 TMEM106CQ9BVX2 250 aa14.11□□□□□ -0.15
CCDC58-204ENST00000479414 NKX1-1Q15270 411 aaPredicted RBP14.1□□□□□ -0.15
CCDC58-204ENST00000479414 SP7Q8TDD2 431 aaPredicted RBP14.09□□□□□ -0.15
CCDC58-204ENST00000479414 PLCB2Q00722 1185 aa14.08□□□□□ -0.16
CCDC58-204ENST00000479414 BMP2KQ9NSY1 1161 aaPredicted RBP14.08□□□□□ -0.16
CCDC58-204ENST00000479414 TTLL13PA6NNM8 815 aa14.07□□□□□ -0.16
CCDC58-204ENST00000479414 CABP2Q9NPB3 220 aa14.05□□□□□ -0.16
CCDC58-204ENST00000479414 PAXIP1Q6ZW49 1069 aaPredicted RBP14.02□□□□□ -0.17
CCDC58-204ENST00000479414 SPRYD3Q8NCJ5 442 aa14.02□□□□□ -0.17
CCDC58-204ENST00000479414 EFCAB3Q8N7B9 438 aa14.01□□□□□ -0.17
CCDC58-204ENST00000479414 ASTLQ6HA08 431 aaPredicted RBP14□□□□□ -0.17
CCDC58-204ENST00000479414 ATMINO43313 823 aaPredicted RBP13.99□□□□□ -0.17
CCDC58-204ENST00000479414 GTPBP6O43824 516 aaPredicted RBP13.98□□□□□ -0.17
CCDC58-204ENST00000479414 SOX12O15370 315 aa13.97□□□□□ -0.17
CCDC58-204ENST00000479414 GOLGA2Q08379 1002 aa13.97□□□□□ -0.17
CCDC58-204ENST00000479414 CFAP44Q96MT7 982 aa13.97□□□□□ -0.17
CCDC58-204ENST00000479414 RYDENQ9NUL5 291 aaKnown RBP13.97□□□□□ -0.17
CCDC58-204ENST00000479414 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
CCDC58-204ENST00000479414 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.17
CCDC58-204ENST00000479414 MFRPQ9BY79 579 aa13.95□□□□□ -0.18
CCDC58-204ENST00000479414 DCBLD2Q96PD2 775 aa13.94□□□□□ -0.18
CCDC58-204ENST00000479414 SLC24A1O60721 1099 aa13.93□□□□□ -0.18
CCDC58-204ENST00000479414 MKRN3Q13064 507 aaKnown RBP13.93□□□□□ -0.18
CCDC58-204ENST00000479414 NLRP6P59044 892 aa13.91□□□□□ -0.18
CCDC58-204ENST00000479414 FBXO22Q8NEZ5 403 aa13.91□□□□□ -0.18
CCDC58-204ENST00000479414 PHF8Q9UPP1 1060 aa13.9□□□□□ -0.18
CCDC58-204ENST00000479414 IER5LQ5T953 404 aa13.87□□□□□ -0.19
CCDC58-204ENST00000479414 POTEIP0CG38 1075 aa13.86□□□□□ -0.19
CCDC58-204ENST00000479414 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
CCDC58-204ENST00000479414 PELP1Q8IZL8 1130 aaKnown RBP13.85□□□□□ -0.19
CCDC58-204ENST00000479414 HAP1P54257 671 aaPredicted RBP13.83□□□□□ -0.2
CCDC58-204ENST00000479414 MS4A4AQ96JQ5 239 aa13.83□□□□□ -0.2
CCDC58-204ENST00000479414 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCDC58-204ENST00000479414 IRX5P78411 483 aaPredicted RBP13.8□□□□□ -0.2
CCDC58-204ENST00000479414 SLC39A7Q92504 469 aa13.78□□□□□ -0.2
CCDC58-204ENST00000479414 TSHZ2Q9NRE2 1034 aa13.77□□□□□ -0.21
CCDC58-204ENST00000479414 PPP1R37O75864 691 aa13.76□□□□□ -0.21
CCDC58-204ENST00000479414 C7P10643 843 aa13.76□□□□□ -0.21
CCDC58-204ENST00000479414 PDCD7Q8N8D1 485 aaKnown RBP13.76□□□□□ -0.21
CCDC58-204ENST00000479414 OCEL1Q9H607 264 aa13.76□□□□□ -0.21
CCDC58-204ENST00000479414 PLCG2P16885 1265 aa13.71□□□□□ -0.21
CCDC58-204ENST00000479414 METRNQ9UJH8 293 aa13.7□□□□□ -0.22
CCDC58-204ENST00000479414 COLQQ9Y215 455 aaPredicted RBP13.69□□□□□ -0.22
CCDC58-204ENST00000479414 SEC24BO95487 1268 aa13.68□□□□□ -0.22
CCDC58-204ENST00000479414 DPY19L2Q6NUT2 758 aa13.68□□□□□ -0.22
CCDC58-204ENST00000479414 VSIG10Q8N0Z9 540 aa13.68□□□□□ -0.22
CCDC58-204ENST00000479414 POTEFA5A3E0 1075 aa13.67□□□□□ -0.22
CCDC58-204ENST00000479414 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
CCDC58-204ENST00000479414 L3MBTL3Q96JM7 780 aaPredicted RBP13.6□□□□□ -0.23
CCDC58-204ENST00000479414 KDM2AQ9Y2K7 1162 aa13.6□□□□□ -0.23
CCDC58-204ENST00000479414 MICALL2Q8IY33 904 aa13.59□□□□□ -0.23
CCDC58-204ENST00000479414 TMEM121BQ9BXQ6 578 aaPredicted RBP13.59□□□□□ -0.23
CCDC58-204ENST00000479414 BOLA1Q9Y3E2 137 aa13.58□□□□□ -0.24
CCDC58-204ENST00000479414 G3V3G9 751 aa13.53□□□□□ -0.24
CCDC58-204ENST00000479414 CRISPLD2Q9H0B8 497 aa13.49□□□□□ -0.25
CCDC58-204ENST00000479414 NCKAP5LQ9HCH0 1330 aa13.48□□□□□ -0.25
CCDC58-204ENST00000479414 PDE4AP27815 886 aa13.46□□□□□ -0.25
CCDC58-204ENST00000479414 POTEB2H3BUK9 544 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms