RNA–Protein interactions for RNA: ENST00000479384.1

CLOCK-204, Transcript of clock circadian regulator, humanhuman

TSL 2

Gene CLOCK, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-204ENST00000479384 RASEFQ8IZ41 740 aa12.29□□□□□ -0.44
CLOCK-204ENST00000479384 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
CLOCK-204ENST00000479384 KIF12Q96FN5 646 aa12.23□□□□□ -0.45
CLOCK-204ENST00000479384 ZBTB47Q9UFB7 747 aaPredicted RBP12.22□□□□□ -0.45
CLOCK-204ENST00000479384 ASTLQ6HA08 431 aaPredicted RBP12.21□□□□□ -0.45
CLOCK-204ENST00000479384 ATMINO43313 823 aaPredicted RBP12.19□□□□□ -0.46
CLOCK-204ENST00000479384 NUBP1P53384 320 aa12.19□□□□□ -0.46
CLOCK-204ENST00000479384 MAP3K13O43283 966 aa12.17□□□□□ -0.46
CLOCK-204ENST00000479384 POTEB2H3BUK9 544 aa12.15□□□□□ -0.46
CLOCK-204ENST00000479384 FBXO3Q9UK99 471 aa12.15□□□□□ -0.46
CLOCK-204ENST00000479384 TRPC6Q9Y210 931 aa12.13□□□□□ -0.47
CLOCK-204ENST00000479384 ATN1P54259 1190 aaPredicted RBP12.11□□□□□ -0.47
CLOCK-204ENST00000479384 SLC39A7Q92504 469 aa12.11□□□□□ -0.47
CLOCK-204ENST00000479384 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
CLOCK-204ENST00000479384 BMP2KQ9NSY1 1161 aaPredicted RBP12.1□□□□□ -0.47
CLOCK-204ENST00000479384 FAM212AQ96EL1 285 aa12.08□□□□□ -0.48
CLOCK-204ENST00000479384 C7P10643 843 aa12.07□□□□□ -0.48
CLOCK-204ENST00000479384 OTUD5Q96G74 571 aa12.07□□□□□ -0.48
CLOCK-204ENST00000479384 TIE1P35590 1138 aa12.06□□□□□ -0.48
CLOCK-204ENST00000479384 SGIP1Q9BQI5 828 aa12.05□□□□□ -0.48
CLOCK-204ENST00000479384 PCDHB13Q9Y5F0 798 aa12.05□□□□□ -0.48
CLOCK-204ENST00000479384 VASPP50552 380 aaPredicted RBP12.04□□□□□ -0.48
CLOCK-204ENST00000479384 TTLL13PA6NNM8 815 aa12.01□□□□□ -0.49
CLOCK-204ENST00000479384 IFNL1Q8IU54 200 aa11.99□□□□□ -0.49
CLOCK-204ENST00000479384 POTEJP0CG39 1038 aa11.98□□□□□ -0.49
CLOCK-204ENST00000479384 DCAF8Q5TAQ9 597 aa11.98□□□□□ -0.49
CLOCK-204ENST00000479384 POTEFA5A3E0 1075 aa11.97□□□□□ -0.49
CLOCK-204ENST00000479384 KLHL34Q8N239 644 aa11.95□□□□□ -0.5
CLOCK-204ENST00000479384 PYGBP11216 843 aa11.94□□□□□ -0.5
CLOCK-204ENST00000479384 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
CLOCK-204ENST00000479384 COLQQ9Y215 455 aaPredicted RBP11.89□□□□□ -0.51
CLOCK-204ENST00000479384 MAMSTRQ6ZN01 415 aa11.88□□□□□ -0.51
CLOCK-204ENST00000479384 TMEM106CQ9BVX2 250 aa11.88□□□□□ -0.51
CLOCK-204ENST00000479384 IER5LQ5T953 404 aa11.87□□□□□ -0.51
CLOCK-204ENST00000479384 SEC24BO95487 1268 aa11.86□□□□□ -0.51
CLOCK-204ENST00000479384 GSE1Q14687 1217 aa11.86□□□□□ -0.51
CLOCK-204ENST00000479384 SCUBE2Q9NQ36 999 aa11.84□□□□□ -0.51
CLOCK-204ENST00000479384 PCDHB8Q9UN66 801 aa11.84□□□□□ -0.51
CLOCK-204ENST00000479384 IFNLR1Q8IU57 520 aaPredicted RBP11.83□□□□□ -0.52
CLOCK-204ENST00000479384 SPOCK2Q92563 424 aa11.77□□□□□ -0.53
CLOCK-204ENST00000479384 CHRM1P11229 460 aaPredicted RBP11.76□□□□□ -0.53
CLOCK-204ENST00000479384 IRX5P78411 483 aaPredicted RBP11.75□□□□□ -0.53
CLOCK-204ENST00000479384 ZNF467Q7Z7K2 595 aaPredicted RBP11.75□□□□□ -0.53
CLOCK-204ENST00000479384 PLCG2P16885 1265 aa11.74□□□□□ -0.53
CLOCK-204ENST00000479384 POTEMA6NI47 508 aa11.71□□□□□ -0.53
CLOCK-204ENST00000479384 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
CLOCK-204ENST00000479384 LCE2DQ5TA82 110 aaPredicted RBP11.68□□□□□ -0.54
CLOCK-204ENST00000479384 POTEGQ6S5H5 508 aa11.68□□□□□ -0.54
CLOCK-204ENST00000479384 OCEL1Q9H607 264 aa11.68□□□□□ -0.54
CLOCK-204ENST00000479384 PSEN1P49768 467 aa11.66□□□□□ -0.54
CLOCK-204ENST00000479384 FAM163AQ96GL9 167 aaPredicted RBP11.64□□□□□ -0.55
CLOCK-204ENST00000479384 GOLGA2Q08379 1002 aa11.61□□□□□ -0.55
CLOCK-204ENST00000479384 SLAIN1Q8ND83 568 aa11.61□□□□□ -0.55
CLOCK-204ENST00000479384 PDAP1Q13442 181 aaKnown RBP11.6□□□□□ -0.55
CLOCK-204ENST00000479384 PDCD7Q8N8D1 485 aaKnown RBP11.6□□□□□ -0.55
CLOCK-204ENST00000479384 MKRN3Q13064 507 aaKnown RBP11.59□□□□□ -0.55
CLOCK-204ENST00000479384 PLSCR2Q9NRY7 297 aa11.55□□□□□ -0.56
CLOCK-204ENST00000479384 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.54□□□□□ -0.562e-7■■■■■ 28.3
CLOCK-204ENST00000479384 TRIM41Q8WV44 630 aa11.53□□□□□ -0.56
CLOCK-204ENST00000479384 CABP2Q9NPB3 220 aa11.52□□□□□ -0.57
CLOCK-204ENST00000479384 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.52□□□□□ -0.57
CLOCK-204ENST00000479384 ILDR1Q86SU0 546 aaPredicted RBP11.5□□□□□ -0.57
CLOCK-204ENST00000479384 PCDH10Q9P2E7 1040 aa11.49□□□□□ -0.57
CLOCK-204ENST00000479384 L3MBTL3Q96JM7 780 aaPredicted RBP11.48□□□□□ -0.57
CLOCK-204ENST00000479384 ST18O60284 1047 aa11.47□□□□□ -0.57
CLOCK-204ENST00000479384 C3orf67Q6ZVT6 689 aa11.45□□□□□ -0.58
CLOCK-204ENST00000479384 DPY19L2Q6NUT2 758 aa11.44□□□□□ -0.58
CLOCK-204ENST00000479384 RNF25Q96BH1 459 aaPredicted RBP11.44□□□□□ -0.58
CLOCK-204ENST00000479384 RIOK3O14730 519 aaKnown RBP11.39□□□□□ -0.59
CLOCK-204ENST00000479384 SNPHO15079 494 aa11.39□□□□□ -0.59
CLOCK-204ENST00000479384 EFCAB3Q8N7B9 438 aa11.39□□□□□ -0.59
CLOCK-204ENST00000479384 BOLA1Q9Y3E2 137 aa11.36□□□□□ -0.59
CLOCK-204ENST00000479384 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.35□□□□□ -0.59
CLOCK-204ENST00000479384 ZFP91Q96JP5 570 aaPredicted RBP11.35□□□□□ -0.59
CLOCK-204ENST00000479384 VGFO15240 615 aaPredicted RBP11.34□□□□□ -0.59
CLOCK-204ENST00000479384 CDAN1Q8IWY9 1227 aa11.34□□□□□ -0.59
CLOCK-204ENST00000479384 TMEM121BQ9BXQ6 578 aaPredicted RBP11.34□□□□□ -0.59
CLOCK-204ENST00000479384 G3V3G9 751 aa11.33□□□□□ -0.6
CLOCK-204ENST00000479384 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
CLOCK-204ENST00000479384 SOX12O15370 315 aa11.27□□□□□ -0.61
CLOCK-204ENST00000479384 MS4A4AQ96JQ5 239 aa11.25□□□□□ -0.61
CLOCK-204ENST00000479384 PHF8Q9UPP1 1060 aa11.24□□□□□ -0.61
CLOCK-204ENST00000479384 MICALL2Q8IY33 904 aa11.23□□□□□ -0.61
CLOCK-204ENST00000479384 BCL11BQ9C0K0 894 aaPredicted RBP11.22□□□□□ -0.61
CLOCK-204ENST00000479384 ECM2O94769 699 aaPredicted RBP11.21□□□□□ -0.61
CLOCK-204ENST00000479384 HOXB3P14651 431 aaPredicted RBP11.21□□□□□ -0.61
CLOCK-204ENST00000479384 TAOK2Q9UL54 1235 aa11.21□□□□□ -0.61
CLOCK-204ENST00000479384 EMP3P54852 163 aa11.2□□□□□ -0.62
CLOCK-204ENST00000479384 PKD2Q13563 968 aa11.19□□□□□ -0.62
CLOCK-204ENST00000479384 TMEM92Q6UXU6 159 aa11.18□□□□□ -0.62
CLOCK-204ENST00000479384 STK24Q9Y6E0 443 aa11.18□□□□□ -0.62
CLOCK-204ENST00000479384 STK25O00506 426 aa11.15□□□□□ -0.62
CLOCK-204ENST00000479384 RGL2O15211 777 aa11.15□□□□□ -0.62
CLOCK-204ENST00000479384 NLRP6P59044 892 aa11.15□□□□□ -0.62
CLOCK-204ENST00000479384 FBXO22Q8NEZ5 403 aa11.15□□□□□ -0.62
CLOCK-204ENST00000479384 POTEB3A0JP26 581 aa11.14□□□□□ -0.63
CLOCK-204ENST00000479384 DOK7Q18PE1 504 aa11.14□□□□□ -0.63
CLOCK-204ENST00000479384 POTEBQ6S5H4 581 aa11.14□□□□□ -0.63
CLOCK-204ENST00000479384 HS3ST6Q96QI5 342 aa11.14□□□□□ -0.63
CLOCK-204ENST00000479384 FAM205CA6NFA0 338 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms