RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 POTEGQ6S5H5 508 aa11.22□□□□□ -0.61
SPC25-204ENST00000479309 POTEB2H3BUK9 544 aa11.17□□□□□ -0.62
SPC25-204ENST00000479309 NUBP1P53384 320 aa11.16□□□□□ -0.62
SPC25-204ENST00000479309 RASEFQ8IZ41 740 aa11.14□□□□□ -0.63
SPC25-204ENST00000479309 DCBLD2Q96PD2 775 aa11.14□□□□□ -0.63
SPC25-204ENST00000479309 CCDC61Q9Y6R9 512 aa11.13□□□□□ -0.63
SPC25-204ENST00000479309 TSPYL2Q9H2G4 693 aaPredicted RBP11.11□□□□□ -0.63
SPC25-204ENST00000479309 PHF12Q96QT6 1004 aa11.1□□□□□ -0.63
SPC25-204ENST00000479309 PCDH10Q9P2E7 1040 aa11.1□□□□□ -0.63
SPC25-204ENST00000479309 IFNLR1Q8IU57 520 aaPredicted RBP11.05□□□□□ -0.64
SPC25-204ENST00000479309 GALR2O43603 387 aaPredicted RBP11.04□□□□□ -0.64
SPC25-204ENST00000479309 FAM212AQ96EL1 285 aa11.04□□□□□ -0.64
SPC25-204ENST00000479309 KIF12Q96FN5 646 aa11.04□□□□□ -0.64
SPC25-204ENST00000479309 KLHL34Q8N239 644 aa11.03□□□□□ -0.64
SPC25-204ENST00000479309 SGIP1Q9BQI5 828 aa11□□□□□ -0.65
SPC25-204ENST00000479309 MS4A3Q96HJ5 214 aa10.99□□□□□ -0.65
SPC25-204ENST00000479309 SPOCK2Q92563 424 aa10.97□□□□□ -0.65
SPC25-204ENST00000479309 MAP3K13O43283 966 aa10.96□□□□□ -0.65
SPC25-204ENST00000479309 GSE1Q14687 1217 aa10.95□□□□□ -0.66
SPC25-204ENST00000479309 DCAF8Q5TAQ9 597 aa10.95□□□□□ -0.66
SPC25-204ENST00000479309 LCE2DQ5TA82 110 aaPredicted RBP10.94□□□□□ -0.66
SPC25-204ENST00000479309 ASTLQ6HA08 431 aaPredicted RBP10.91□□□□□ -0.66
SPC25-204ENST00000479309 CHRM1P11229 460 aaPredicted RBP10.89□□□□□ -0.67
SPC25-204ENST00000479309 PCDHB13Q9Y5F0 798 aa10.88□□□□□ -0.67
SPC25-204ENST00000479309 TIE1P35590 1138 aa10.87□□□□□ -0.67
SPC25-204ENST00000479309 ATMINO43313 823 aaPredicted RBP10.86□□□□□ -0.67
SPC25-204ENST00000479309 POTEJP0CG39 1038 aa10.86□□□□□ -0.67
SPC25-204ENST00000479309 PELP1Q8IZL8 1130 aaKnown RBP10.86□□□□□ -0.67
SPC25-204ENST00000479309 PYGBP11216 843 aa10.84□□□□□ -0.67
SPC25-204ENST00000479309 IFNL1Q8IU54 200 aa10.84□□□□□ -0.67
SPC25-204ENST00000479309 TRPC6Q9Y210 931 aa10.84□□□□□ -0.67
SPC25-204ENST00000479309 BMP2KQ9NSY1 1161 aaPredicted RBP10.82□□□□□ -0.68
SPC25-204ENST00000479309 ATN1P54259 1190 aaPredicted RBP10.79□□□□□ -0.68
SPC25-204ENST00000479309 TRIM41Q8WV44 630 aa10.79□□□□□ -0.68
SPC25-204ENST00000479309 FAM163AQ96GL9 167 aaPredicted RBP10.79□□□□□ -0.68
SPC25-204ENST00000479309 CIZ1Q9ULV3 898 aaPredicted RBP10.78□□□□□ -0.68
SPC25-204ENST00000479309 TTLL13PA6NNM8 815 aa10.77□□□□□ -0.69
SPC25-204ENST00000479309 ZNF467Q7Z7K2 595 aaPredicted RBP10.77□□□□□ -0.69
SPC25-204ENST00000479309 SLC39A7Q92504 469 aa10.77□□□□□ -0.69
SPC25-204ENST00000479309 C7P10643 843 aa10.76□□□□□ -0.69
SPC25-204ENST00000479309 PCDHB8Q9UN66 801 aa10.73□□□□□ -0.69
SPC25-204ENST00000479309 METRNQ9UJH8 293 aa10.71□□□□□ -0.69
SPC25-204ENST00000479309 TMEM106CQ9BVX2 250 aa10.7□□□□□ -0.7
SPC25-204ENST00000479309 IER5LQ5T953 404 aa10.69□□□□□ -0.7
SPC25-204ENST00000479309 TRIM35Q9UPQ4 493 aa10.68□□□□□ -0.7
SPC25-204ENST00000479309 POTEFA5A3E0 1075 aa10.65□□□□□ -0.7
SPC25-204ENST00000479309 PDAP1Q13442 181 aaKnown RBP10.64□□□□□ -0.71
SPC25-204ENST00000479309 MAMSTRQ6ZN01 415 aa10.64□□□□□ -0.71
SPC25-204ENST00000479309 PSEN1P49768 467 aa10.63□□□□□ -0.71
SPC25-204ENST00000479309 CDAN1Q8IWY9 1227 aa10.63□□□□□ -0.71
SPC25-204ENST00000479309 PKD2Q13563 968 aa10.58□□□□□ -0.72
SPC25-204ENST00000479309 RNF25Q96BH1 459 aaPredicted RBP10.58□□□□□ -0.72
SPC25-204ENST00000479309 COLQQ9Y215 455 aaPredicted RBP10.58□□□□□ -0.72
SPC25-204ENST00000479309 RIOK3O14730 519 aaKnown RBP10.57□□□□□ -0.72
SPC25-204ENST00000479309 IRX5P78411 483 aaPredicted RBP10.57□□□□□ -0.72
SPC25-204ENST00000479309 SEC24BO95487 1268 aa10.55□□□□□ -0.72
SPC25-204ENST00000479309 VGFO15240 615 aaPredicted RBP10.53□□□□□ -0.72
SPC25-204ENST00000479309 OCEL1Q9H607 264 aa10.53□□□□□ -0.72
SPC25-204ENST00000479309 SCUBE2Q9NQ36 999 aa10.53□□□□□ -0.72
SPC25-204ENST00000479309 ILDR1Q86SU0 546 aaPredicted RBP10.52□□□□□ -0.73
SPC25-204ENST00000479309 ECM2O94769 699 aaPredicted RBP10.51□□□□□ -0.73
SPC25-204ENST00000479309 PLCG2P16885 1265 aa10.5□□□□□ -0.73
SPC25-204ENST00000479309 GOLGA2Q08379 1002 aa10.5□□□□□ -0.73
SPC25-204ENST00000479309 MKRN3Q13064 507 aaKnown RBP10.5□□□□□ -0.73
SPC25-204ENST00000479309 TAOK2Q9UL54 1235 aa10.49□□□□□ -0.73
SPC25-204ENST00000479309 MMRN1Q13201 1228 aa10.48□□□□□ -0.73
SPC25-204ENST00000479309 PDCD7Q8N8D1 485 aaKnown RBP10.47□□□□□ -0.73
SPC25-204ENST00000479309 CABP2Q9NPB3 220 aa10.47□□□□□ -0.73
SPC25-204ENST00000479309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.46□□□□□ -0.73
SPC25-204ENST00000479309 ZFP91Q96JP5 570 aaPredicted RBP10.46□□□□□ -0.73
SPC25-204ENST00000479309 RGL2O15211 777 aa10.43□□□□□ -0.74
SPC25-204ENST00000479309 SPNS2Q8IVW8 549 aa10.43□□□□□ -0.74
SPC25-204ENST00000479309 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.43□□□□□ -0.742e-6■■■■□ 21.6
SPC25-204ENST00000479309 EFCAB3Q8N7B9 438 aa10.4□□□□□ -0.74
SPC25-204ENST00000479309 SOX12O15370 315 aa10.39□□□□□ -0.75
SPC25-204ENST00000479309 L3MBTL3Q96JM7 780 aaPredicted RBP10.38□□□□□ -0.75
SPC25-204ENST00000479309 BCL11BQ9C0K0 894 aaPredicted RBP10.36□□□□□ -0.75
SPC25-204ENST00000479309 ST18O60284 1047 aa10.35□□□□□ -0.75
SPC25-204ENST00000479309 STK25O00506 426 aa10.33□□□□□ -0.76
SPC25-204ENST00000479309 DPY19L2Q6NUT2 758 aa10.32□□□□□ -0.76
SPC25-204ENST00000479309 STK24Q9Y6E0 443 aa10.32□□□□□ -0.76
SPC25-204ENST00000479309 TMEM121BQ9BXQ6 578 aaPredicted RBP10.29□□□□□ -0.76
SPC25-204ENST00000479309 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.29□□□□□ -0.76
SPC25-204ENST00000479309 SLAIN1Q8ND83 568 aa10.28□□□□□ -0.76
SPC25-204ENST00000479309 FBXO22Q8NEZ5 403 aa10.28□□□□□ -0.76
SPC25-204ENST00000479309 MS4A4AQ96JQ5 239 aa10.28□□□□□ -0.76
SPC25-204ENST00000479309 PHF8Q9UPP1 1060 aa10.28□□□□□ -0.76
SPC25-204ENST00000479309 BOLA1Q9Y3E2 137 aa10.28□□□□□ -0.76
SPC25-204ENST00000479309 NLRP6P59044 892 aa10.27□□□□□ -0.77
SPC25-204ENST00000479309 HS6ST3Q8IZP7 471 aa10.27□□□□□ -0.77
SPC25-204ENST00000479309 DNAJC5Q9H3Z4 198 aa10.26□□□□□ -0.77
SPC25-204ENST00000479309 C3orf67Q6ZVT6 689 aa10.25□□□□□ -0.77
SPC25-204ENST00000479309 MFRPQ9BY79 579 aa10.25□□□□□ -0.77
SPC25-204ENST00000479309 G3V3G9 751 aa10.22□□□□□ -0.77
SPC25-204ENST00000479309 MICALL2Q8IY33 904 aa10.2□□□□□ -0.78
SPC25-204ENST00000479309 SNPHO15079 494 aa10.17□□□□□ -0.78
SPC25-204ENST00000479309 CHGAP10645 457 aaKnown RBP10.16□□□□□ -0.78
SPC25-204ENST00000479309 AMER1Q5JTC6 1135 aaPredicted RBP10.15□□□□□ -0.78
SPC25-204ENST00000479309 NKX1-1Q15270 411 aaPredicted RBP10.1□□□□□ -0.79
SPC25-204ENST00000479309 TMEM92Q6UXU6 159 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms