RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 TSPYL2Q9H2G4 693 aaPredicted RBP11.84□□□□□ -0.51
RC3H1-204ENST00000479099 ZBTB47Q9UFB7 747 aaPredicted RBP11.84□□□□□ -0.51
RC3H1-204ENST00000479099 CCDC61Q9Y6R9 512 aa11.8□□□□□ -0.52
RC3H1-204ENST00000479099 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
RC3H1-204ENST00000479099 LHX8Q68G74 356 aa11.74□□□□□ -0.53
RC3H1-204ENST00000479099 MS4A3Q96HJ5 214 aa11.74□□□□□ -0.53
RC3H1-204ENST00000479099 NUBP1P53384 320 aa11.72□□□□□ -0.53
RC3H1-204ENST00000479099 KIF12Q96FN5 646 aa11.71□□□□□ -0.53
RC3H1-204ENST00000479099 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
RC3H1-204ENST00000479099 FAM212AQ96EL1 285 aa11.66□□□□□ -0.54
RC3H1-204ENST00000479099 ASTLQ6HA08 431 aaPredicted RBP11.65□□□□□ -0.54
RC3H1-204ENST00000479099 MAP3K13O43283 966 aa11.64□□□□□ -0.55
RC3H1-204ENST00000479099 ATMINO43313 823 aaPredicted RBP11.61□□□□□ -0.55
RC3H1-204ENST00000479099 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
RC3H1-204ENST00000479099 SGIP1Q9BQI5 828 aa11.6□□□□□ -0.55
RC3H1-204ENST00000479099 KLHL34Q8N239 644 aa11.58□□□□□ -0.56
RC3H1-204ENST00000479099 DCAF8Q5TAQ9 597 aa11.56□□□□□ -0.56
RC3H1-204ENST00000479099 PCDHB13Q9Y5F0 798 aa11.56□□□□□ -0.56
RC3H1-204ENST00000479099 TIE1P35590 1138 aa11.55□□□□□ -0.56
RC3H1-204ENST00000479099 SLC39A7Q92504 469 aa11.55□□□□□ -0.56
RC3H1-204ENST00000479099 BMP2KQ9NSY1 1161 aaPredicted RBP11.55□□□□□ -0.56
RC3H1-204ENST00000479099 DAXXQ9UER7 740 aaPredicted RBP11.55□□□□□ -0.56
RC3H1-204ENST00000479099 TRPC6Q9Y210 931 aa11.55□□□□□ -0.56
RC3H1-204ENST00000479099 ATN1P54259 1190 aaPredicted RBP11.54□□□□□ -0.56
RC3H1-204ENST00000479099 C7P10643 843 aa11.53□□□□□ -0.56
RC3H1-204ENST00000479099 METRNQ9UJH8 293 aa11.52□□□□□ -0.57
RC3H1-204ENST00000479099 GSE1Q14687 1217 aa11.49□□□□□ -0.57
RC3H1-204ENST00000479099 IFNL1Q8IU54 200 aa11.49□□□□□ -0.57
RC3H1-204ENST00000479099 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
RC3H1-204ENST00000479099 POTEB2H3BUK9 544 aa11.47□□□□□ -0.57
RC3H1-204ENST00000479099 PYGBP11216 843 aa11.47□□□□□ -0.57
RC3H1-204ENST00000479099 IFNLR1Q8IU57 520 aaPredicted RBP11.46□□□□□ -0.57
RC3H1-204ENST00000479099 SPOCK2Q92563 424 aa11.43□□□□□ -0.58
RC3H1-204ENST00000479099 OTUD5Q96G74 571 aa11.41□□□□□ -0.58
RC3H1-204ENST00000479099 TRIM35Q9UPQ4 493 aa11.4□□□□□ -0.58
RC3H1-204ENST00000479099 TMEM106CQ9BVX2 250 aa11.39□□□□□ -0.59
RC3H1-204ENST00000479099 CHRM1P11229 460 aaPredicted RBP11.37□□□□□ -0.59
RC3H1-204ENST00000479099 IER5LQ5T953 404 aa11.37□□□□□ -0.59
RC3H1-204ENST00000479099 POTEFA5A3E0 1075 aa11.36□□□□□ -0.59
RC3H1-204ENST00000479099 PCDHB8Q9UN66 801 aa11.36□□□□□ -0.59
RC3H1-204ENST00000479099 ZNF467Q7Z7K2 595 aaPredicted RBP11.35□□□□□ -0.59
RC3H1-204ENST00000479099 SEC24BO95487 1268 aa11.34□□□□□ -0.59
RC3H1-204ENST00000479099 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
RC3H1-204ENST00000479099 PRKCSHP14314 528 aaPredicted RBP11.34□□□□□ -0.59
RC3H1-204ENST00000479099 MAMSTRQ6ZN01 415 aa11.34□□□□□ -0.59
RC3H1-204ENST00000479099 CIZ1Q9ULV3 898 aaPredicted RBP11.33□□□□□ -0.6
RC3H1-204ENST00000479099 COLQQ9Y215 455 aaPredicted RBP11.31□□□□□ -0.6
RC3H1-204ENST00000479099 SCUBE2Q9NQ36 999 aa11.28□□□□□ -0.6
RC3H1-204ENST00000479099 PLCG2P16885 1265 aa11.24□□□□□ -0.61
RC3H1-204ENST00000479099 BCANQ96GW7 911 aa11.24□□□□□ -0.61
RC3H1-204ENST00000479099 IRX5P78411 483 aaPredicted RBP11.23□□□□□ -0.61
RC3H1-204ENST00000479099 TRIM41Q8WV44 630 aa11.23□□□□□ -0.61
RC3H1-204ENST00000479099 PSEN1P49768 467 aa11.22□□□□□ -0.61
RC3H1-204ENST00000479099 TAOK2Q9UL54 1235 aa11.22□□□□□ -0.61
RC3H1-204ENST00000479099 PDAP1Q13442 181 aaKnown RBP11.2□□□□□ -0.62
RC3H1-204ENST00000479099 ARXQ96QS3 562 aa11.2□□□□□ -0.62
RC3H1-204ENST00000479099 GOLGA2Q08379 1002 aa11.19□□□□□ -0.62
RC3H1-204ENST00000479099 OCEL1Q9H607 264 aa11.19□□□□□ -0.62
RC3H1-204ENST00000479099 MKRN3Q13064 507 aaKnown RBP11.16□□□□□ -0.62
RC3H1-204ENST00000479099 PLCB2Q00722 1185 aa11.15□□□□□ -0.62
RC3H1-204ENST00000479099 PDCD7Q8N8D1 485 aaKnown RBP11.1□□□□□ -0.63
RC3H1-204ENST00000479099 CABP2Q9NPB3 220 aa11.08□□□□□ -0.64
RC3H1-204ENST00000479099 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.07□□□□□ -0.64
RC3H1-204ENST00000479099 SLAIN1Q8ND83 568 aa11.06□□□□□ -0.64
RC3H1-204ENST00000479099 POTEMA6NI47 508 aa11.04□□□□□ -0.64
RC3H1-204ENST00000479099 RIOK3O14730 519 aaKnown RBP11.04□□□□□ -0.64
RC3H1-204ENST00000479099 ILDR1Q86SU0 546 aaPredicted RBP11.04□□□□□ -0.64
RC3H1-204ENST00000479099 RNF25Q96BH1 459 aaPredicted RBP11.03□□□□□ -0.64
RC3H1-204ENST00000479099 FAM163AQ96GL9 167 aaPredicted RBP11.03□□□□□ -0.64
RC3H1-204ENST00000479099 L3MBTL3Q96JM7 780 aaPredicted RBP11.03□□□□□ -0.64
RC3H1-204ENST00000479099 TIMELESSQ9UNS1 1208 aa11.03□□□□□ -0.64
RC3H1-204ENST00000479099 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.02□□□□□ -0.65
RC3H1-204ENST00000479099 POTEGQ6S5H5 508 aa11.01□□□□□ -0.65
RC3H1-204ENST00000479099 VGFO15240 615 aaPredicted RBP11□□□□□ -0.65
RC3H1-204ENST00000479099 LCE2DQ5TA82 110 aaPredicted RBP11□□□□□ -0.65
RC3H1-204ENST00000479099 TPRNQ4KMQ1 711 aa10.98□□□□□ -0.65
RC3H1-204ENST00000479099 C3orf67Q6ZVT6 689 aa10.97□□□□□ -0.65
RC3H1-204ENST00000479099 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.96□□□□□ -0.65
RC3H1-204ENST00000479099 HAP1P54257 671 aaPredicted RBP10.96□□□□□ -0.65
RC3H1-204ENST00000479099 EFCAB3Q8N7B9 438 aa10.96□□□□□ -0.65
RC3H1-204ENST00000479099 ZFP91Q96JP5 570 aaPredicted RBP10.96□□□□□ -0.65
RC3H1-204ENST00000479099 DPY19L2Q6NUT2 758 aa10.94□□□□□ -0.66
RC3H1-204ENST00000479099 ECM2O94769 699 aaPredicted RBP10.93□□□□□ -0.66
RC3H1-204ENST00000479099 G3V3G9 751 aa10.92□□□□□ -0.66
RC3H1-204ENST00000479099 TULP1O00294 542 aaPredicted RBP10.91□□□□□ -0.66
RC3H1-204ENST00000479099 SNPHO15079 494 aa10.91□□□□□ -0.66
RC3H1-204ENST00000479099 BOLA1Q9Y3E2 137 aa10.91□□□□□ -0.66
RC3H1-204ENST00000479099 SOX12O15370 315 aa10.9□□□□□ -0.66
RC3H1-204ENST00000479099 PCDH10Q9P2E7 1040 aa10.89□□□□□ -0.67
RC3H1-204ENST00000479099 ST18O60284 1047 aa10.88□□□□□ -0.67
RC3H1-204ENST00000479099 PKD2Q13563 968 aa10.88□□□□□ -0.67
RC3H1-204ENST00000479099 VSIG10Q8N0Z9 540 aa10.88□□□□□ -0.67
RC3H1-204ENST00000479099 BCL11BQ9C0K0 894 aaPredicted RBP10.85□□□□□ -0.67
RC3H1-204ENST00000479099 HOMEZQ8IX15 550 aa10.84□□□□□ -0.67
RC3H1-204ENST00000479099 TMEM121BQ9BXQ6 578 aaPredicted RBP10.84□□□□□ -0.67
RC3H1-204ENST00000479099 RGL2O15211 777 aa10.82□□□□□ -0.68
RC3H1-204ENST00000479099 ERICH6Q7L0X2 663 aa10.82□□□□□ -0.68
RC3H1-204ENST00000479099 PHF8Q9UPP1 1060 aa10.82□□□□□ -0.68
RC3H1-204ENST00000479099 STK24Q9Y6E0 443 aa10.82□□□□□ -0.68
RC3H1-204ENST00000479099 STK25O00506 426 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms