RNA–Protein interactions for RNA: ENST00000478588.5

AFF4-208, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 3

Gene AFF4, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-208ENST00000478588 CCDC61Q9Y6R9 512 aa12.59□□□□□ -0.39
AFF4-208ENST00000478588 GABBR2O75899 941 aa12.58□□□□□ -0.4
AFF4-208ENST00000478588 DCAF8Q5TAQ9 597 aa12.58□□□□□ -0.4
AFF4-208ENST00000478588 FAM212AQ96EL1 285 aa12.55□□□□□ -0.4
AFF4-208ENST00000478588 GALR2O43603 387 aaPredicted RBP12.49□□□□□ -0.41
AFF4-208ENST00000478588 KIF12Q96FN5 646 aa12.49□□□□□ -0.41
AFF4-208ENST00000478588 CIZ1Q9ULV3 898 aaPredicted RBP12.49□□□□□ -0.41
AFF4-208ENST00000478588 PYGBP11216 843 aa12.47□□□□□ -0.41
AFF4-208ENST00000478588 MAP3K13O43283 966 aa12.46□□□□□ -0.41
AFF4-208ENST00000478588 GSE1Q14687 1217 aa12.46□□□□□ -0.41
AFF4-208ENST00000478588 MS4A3Q96HJ5 214 aa12.44□□□□□ -0.42
AFF4-208ENST00000478588 CLCN6P51797 869 aa12.41□□□□□ -0.42
AFF4-208ENST00000478588 TRPC6Q9Y210 931 aa12.37□□□□□ -0.43
AFF4-208ENST00000478588 PCDHB13Q9Y5F0 798 aa12.37□□□□□ -0.43
AFF4-208ENST00000478588 POTEIP0CG38 1075 aa12.36□□□□□ -0.43
AFF4-208ENST00000478588 IFNL1Q8IU54 200 aa12.35□□□□□ -0.43
AFF4-208ENST00000478588 CHRM1P11229 460 aaPredicted RBP12.33□□□□□ -0.44
AFF4-208ENST00000478588 PCDHB8Q9UN66 801 aa12.32□□□□□ -0.44
AFF4-208ENST00000478588 SGIP1Q9BQI5 828 aa12.31□□□□□ -0.44
AFF4-208ENST00000478588 PKD2Q13563 968 aa12.3□□□□□ -0.44
AFF4-208ENST00000478588 DCBLD2Q96PD2 775 aa12.3□□□□□ -0.44
AFF4-208ENST00000478588 BMP2KQ9NSY1 1161 aaPredicted RBP12.24□□□□□ -0.45
AFF4-208ENST00000478588 ATMINO43313 823 aaPredicted RBP12.23□□□□□ -0.45
AFF4-208ENST00000478588 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
AFF4-208ENST00000478588 TRIM41Q8WV44 630 aa12.23□□□□□ -0.45
AFF4-208ENST00000478588 ECM2O94769 699 aaPredicted RBP12.22□□□□□ -0.45
AFF4-208ENST00000478588 RNF25Q96BH1 459 aaPredicted RBP12.21□□□□□ -0.45
AFF4-208ENST00000478588 ATN1P54259 1190 aaPredicted RBP12.2□□□□□ -0.46
AFF4-208ENST00000478588 ASTLQ6HA08 431 aaPredicted RBP12.2□□□□□ -0.46
AFF4-208ENST00000478588 ZNF467Q7Z7K2 595 aaPredicted RBP12.2□□□□□ -0.46
AFF4-208ENST00000478588 TTLL13PA6NNM8 815 aa12.19□□□□□ -0.46
AFF4-208ENST00000478588 TIE1P35590 1138 aa12.19□□□□□ -0.46
AFF4-208ENST00000478588 TMEM106CQ9BVX2 250 aa12.17□□□□□ -0.46
AFF4-208ENST00000478588 RGL2O15211 777 aa12.14□□□□□ -0.47
AFF4-208ENST00000478588 PSEN1P49768 467 aa12.14□□□□□ -0.47
AFF4-208ENST00000478588 RIOK3O14730 519 aaKnown RBP12.12□□□□□ -0.47
AFF4-208ENST00000478588 TRIM35Q9UPQ4 493 aa12.11□□□□□ -0.47
AFF4-208ENST00000478588 PDAP1Q13442 181 aaKnown RBP12.1□□□□□ -0.47
AFF4-208ENST00000478588 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.04□□□□□ -0.48
AFF4-208ENST00000478588 ZFP91Q96JP5 570 aaPredicted RBP12.04□□□□□ -0.48
AFF4-208ENST00000478588 RTN4Q9NQC3 1192 aaKnown RBP12.04□□□□□ -0.48
AFF4-208ENST00000478588 METRNQ9UJH8 293 aa12.04□□□□□ -0.48
AFF4-208ENST00000478588 VGFO15240 615 aaPredicted RBP12.03□□□□□ -0.48
AFF4-208ENST00000478588 SLC39A7Q92504 469 aa12.03□□□□□ -0.48
AFF4-208ENST00000478588 C7P10643 843 aa12.02□□□□□ -0.49
AFF4-208ENST00000478588 POTEFA5A3E0 1075 aa12.01□□□□□ -0.49
AFF4-208ENST00000478588 CABP2Q9NPB3 220 aa12□□□□□ -0.49
AFF4-208ENST00000478588 POTEB2H3BUK9 544 aa11.99□□□□□ -0.49
AFF4-208ENST00000478588 COLQQ9Y215 455 aaPredicted RBP11.99□□□□□ -0.49
AFF4-208ENST00000478588 AMER1Q5JTC6 1135 aaPredicted RBP11.97□□□□□ -0.49
AFF4-208ENST00000478588 GOLGA2Q08379 1002 aa11.95□□□□□ -0.5
AFF4-208ENST00000478588 BCL11BQ9C0K0 894 aaPredicted RBP11.95□□□□□ -0.5
AFF4-208ENST00000478588 MKRN3Q13064 507 aaKnown RBP11.94□□□□□ -0.5
AFF4-208ENST00000478588 IER5LQ5T953 404 aa11.94□□□□□ -0.5
AFF4-208ENST00000478588 LHX8Q68G74 356 aa11.94□□□□□ -0.5
AFF4-208ENST00000478588 STK25O00506 426 aa11.93□□□□□ -0.5
AFF4-208ENST00000478588 SEC24BO95487 1268 aa11.93□□□□□ -0.5
AFF4-208ENST00000478588 IRX5P78411 483 aaPredicted RBP11.93□□□□□ -0.5
AFF4-208ENST00000478588 EFCAB3Q8N7B9 438 aa11.93□□□□□ -0.5
AFF4-208ENST00000478588 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
AFF4-208ENST00000478588 TAOK2Q9UL54 1235 aa11.92□□□□□ -0.5
AFF4-208ENST00000478588 POTEJP0CG39 1038 aa11.9□□□□□ -0.5
AFF4-208ENST00000478588 OCEL1Q9H607 264 aa11.88□□□□□ -0.51
AFF4-208ENST00000478588 CHGAP10645 457 aaKnown RBP11.87□□□□□ -0.51
AFF4-208ENST00000478588 PLCG2P16885 1265 aa11.87□□□□□ -0.51
AFF4-208ENST00000478588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.87□□□□□ -0.511e-7■■■□□ 15.8
AFF4-208ENST00000478588 DCAF8L2P0C7V8 631 aa11.86□□□□□ -0.51
AFF4-208ENST00000478588 DPY19L2Q6NUT2 758 aa11.84□□□□□ -0.51
AFF4-208ENST00000478588 PDCD7Q8N8D1 485 aaKnown RBP11.84□□□□□ -0.51
AFF4-208ENST00000478588 ILDR1Q86SU0 546 aaPredicted RBP11.82□□□□□ -0.52
AFF4-208ENST00000478588 PHF8Q9UPP1 1060 aa11.82□□□□□ -0.52
AFF4-208ENST00000478588 HS6ST3Q8IZP7 471 aa11.81□□□□□ -0.52
AFF4-208ENST00000478588 SOX12O15370 315 aa11.79□□□□□ -0.52
AFF4-208ENST00000478588 OTUD5Q96G74 571 aa11.79□□□□□ -0.52
AFF4-208ENST00000478588 MS4A4AQ96JQ5 239 aa11.77□□□□□ -0.53
AFF4-208ENST00000478588 MFRPQ9BY79 579 aa11.77□□□□□ -0.53
AFF4-208ENST00000478588 FBXO22Q8NEZ5 403 aa11.74□□□□□ -0.53
AFF4-208ENST00000478588 NKX1-1Q15270 411 aaPredicted RBP11.73□□□□□ -0.53
AFF4-208ENST00000478588 NLRP6P59044 892 aa11.71□□□□□ -0.53
AFF4-208ENST00000478588 L3MBTL3Q96JM7 780 aaPredicted RBP11.68□□□□□ -0.54
AFF4-208ENST00000478588 DNAJC5Q9H3Z4 198 aa11.67□□□□□ -0.54
AFF4-208ENST00000478588 BOLA1Q9Y3E2 137 aa11.67□□□□□ -0.54
AFF4-208ENST00000478588 MAMSTRQ6ZN01 415 aa11.66□□□□□ -0.54
AFF4-208ENST00000478588 SCUBE2Q9NQ36 999 aa11.66□□□□□ -0.54
AFF4-208ENST00000478588 PPP1R37O75864 691 aa11.65□□□□□ -0.54
AFF4-208ENST00000478588 TMEM121BQ9BXQ6 578 aaPredicted RBP11.61□□□□□ -0.55
AFF4-208ENST00000478588 MICALL2Q8IY33 904 aa11.6□□□□□ -0.55
AFF4-208ENST00000478588 G3V3G9 751 aa11.59□□□□□ -0.55
AFF4-208ENST00000478588 SLAIN1Q8ND83 568 aa11.59□□□□□ -0.55
AFF4-208ENST00000478588 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.59□□□□□ -0.55
AFF4-208ENST00000478588 GTPBP6O43824 516 aaPredicted RBP11.58□□□□□ -0.56
AFF4-208ENST00000478588 C3orf67Q6ZVT6 689 aa11.58□□□□□ -0.56
AFF4-208ENST00000478588 BBXQ8WY36 941 aaPredicted RBP11.56□□□□□ -0.56
AFF4-208ENST00000478588 TMEM92Q6UXU6 159 aa11.53□□□□□ -0.56
AFF4-208ENST00000478588 RYDENQ9NUL5 291 aaKnown RBP11.47□□□□□ -0.57
AFF4-208ENST00000478588 PAXIP1Q6ZW49 1069 aaPredicted RBP11.43□□□□□ -0.58
AFF4-208ENST00000478588 FAM163AQ96GL9 167 aaPredicted RBP11.43□□□□□ -0.58
AFF4-208ENST00000478588 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.43□□□□□ -0.58
AFF4-208ENST00000478588 SPRYD3Q8NCJ5 442 aa11.42□□□□□ -0.58
AFF4-208ENST00000478588 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms