RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 RASEFQ8IZ41 740 aa12.78□□□□□ -0.36
HPS3-205ENST00000478525 PLCD3Q8N3E9 789 aa12.78□□□□□ -0.36
HPS3-205ENST00000478525 PELP1Q8IZL8 1130 aaKnown RBP12.76□□□□□ -0.37
HPS3-205ENST00000478525 ASTLQ6HA08 431 aaPredicted RBP12.72□□□□□ -0.37
HPS3-205ENST00000478525 KIF12Q96FN5 646 aa12.72□□□□□ -0.37
HPS3-205ENST00000478525 ATMINO43313 823 aaPredicted RBP12.7□□□□□ -0.38
HPS3-205ENST00000478525 POTEB2H3BUK9 544 aa12.68□□□□□ -0.38
HPS3-205ENST00000478525 MAP3K13O43283 966 aa12.66□□□□□ -0.38
HPS3-205ENST00000478525 NUBP1P53384 320 aa12.65□□□□□ -0.38
HPS3-205ENST00000478525 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
HPS3-205ENST00000478525 METRNQ9UJH8 293 aa12.64□□□□□ -0.39
HPS3-205ENST00000478525 TRPC6Q9Y210 931 aa12.64□□□□□ -0.39
HPS3-205ENST00000478525 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
HPS3-205ENST00000478525 SLC39A7Q92504 469 aa12.61□□□□□ -0.39
HPS3-205ENST00000478525 OTUD5Q96G74 571 aa12.61□□□□□ -0.39
HPS3-205ENST00000478525 BMP2KQ9NSY1 1161 aaPredicted RBP12.6□□□□□ -0.39
HPS3-205ENST00000478525 C7P10643 843 aa12.58□□□□□ -0.4
HPS3-205ENST00000478525 TIE1P35590 1138 aa12.55□□□□□ -0.4
HPS3-205ENST00000478525 FBXO3Q9UK99 471 aa12.55□□□□□ -0.4
HPS3-205ENST00000478525 FAM212AQ96EL1 285 aa12.54□□□□□ -0.4
HPS3-205ENST00000478525 PCDHB13Q9Y5F0 798 aa12.53□□□□□ -0.4
HPS3-205ENST00000478525 POTEJP0CG39 1038 aa12.51□□□□□ -0.41
HPS3-205ENST00000478525 TTLL13PA6NNM8 815 aa12.5□□□□□ -0.41
HPS3-205ENST00000478525 SGIP1Q9BQI5 828 aa12.5□□□□□ -0.41
HPS3-205ENST00000478525 POTEFA5A3E0 1075 aa12.48□□□□□ -0.41
HPS3-205ENST00000478525 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
HPS3-205ENST00000478525 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
HPS3-205ENST00000478525 DCAF8Q5TAQ9 597 aa12.42□□□□□ -0.42
HPS3-205ENST00000478525 TRIM35Q9UPQ4 493 aa12.42□□□□□ -0.42
HPS3-205ENST00000478525 COLQQ9Y215 455 aaPredicted RBP12.4□□□□□ -0.42
HPS3-205ENST00000478525 PYGBP11216 843 aa12.39□□□□□ -0.43
HPS3-205ENST00000478525 MAMSTRQ6ZN01 415 aa12.39□□□□□ -0.43
HPS3-205ENST00000478525 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
HPS3-205ENST00000478525 TMEM106CQ9BVX2 250 aa12.36□□□□□ -0.43
HPS3-205ENST00000478525 SEC24BO95487 1268 aa12.35□□□□□ -0.43
HPS3-205ENST00000478525 IER5LQ5T953 404 aa12.35□□□□□ -0.43
HPS3-205ENST00000478525 SCUBE2Q9NQ36 999 aa12.35□□□□□ -0.43
HPS3-205ENST00000478525 PCDHB8Q9UN66 801 aa12.31□□□□□ -0.44
HPS3-205ENST00000478525 POTEMA6NI47 508 aa12.28□□□□□ -0.44
HPS3-205ENST00000478525 GSE1Q14687 1217 aa12.28□□□□□ -0.44
HPS3-205ENST00000478525 IRX5P78411 483 aaPredicted RBP12.23□□□□□ -0.45
HPS3-205ENST00000478525 POTEGQ6S5H5 508 aa12.23□□□□□ -0.45
HPS3-205ENST00000478525 IFNLR1Q8IU57 520 aaPredicted RBP12.23□□□□□ -0.45
HPS3-205ENST00000478525 PCDH10Q9P2E7 1040 aa12.23□□□□□ -0.45
HPS3-205ENST00000478525 PLCG2P16885 1265 aa12.22□□□□□ -0.45
HPS3-205ENST00000478525 LCE2DQ5TA82 110 aaPredicted RBP12.22□□□□□ -0.45
HPS3-205ENST00000478525 ZNF467Q7Z7K2 595 aaPredicted RBP12.19□□□□□ -0.46
HPS3-205ENST00000478525 SPOCK2Q92563 424 aa12.18□□□□□ -0.46
HPS3-205ENST00000478525 CHRM1P11229 460 aaPredicted RBP12.17□□□□□ -0.46
HPS3-205ENST00000478525 FAM163AQ96GL9 167 aaPredicted RBP12.16□□□□□ -0.46
HPS3-205ENST00000478525 OCEL1Q9H607 264 aa12.14□□□□□ -0.47
HPS3-205ENST00000478525 CIZ1Q9ULV3 898 aaPredicted RBP12.12□□□□□ -0.47
HPS3-205ENST00000478525 SLAIN1Q8ND83 568 aa12.11□□□□□ -0.47
HPS3-205ENST00000478525 PSEN1P49768 467 aa12.09□□□□□ -0.47
HPS3-205ENST00000478525 PDCD7Q8N8D1 485 aaKnown RBP12.07□□□□□ -0.48
HPS3-205ENST00000478525 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
HPS3-205ENST00000478525 MKRN3Q13064 507 aaKnown RBP12.04□□□□□ -0.48
HPS3-205ENST00000478525 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
HPS3-205ENST00000478525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.99□□□□□ -0.492e-6■■■■□ 24.3
HPS3-205ENST00000478525 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.98□□□□□ -0.49
HPS3-205ENST00000478525 ST18O60284 1047 aa11.97□□□□□ -0.49
HPS3-205ENST00000478525 CABP2Q9NPB3 220 aa11.96□□□□□ -0.49
HPS3-205ENST00000478525 ILDR1Q86SU0 546 aaPredicted RBP11.95□□□□□ -0.5
HPS3-205ENST00000478525 C3orf67Q6ZVT6 689 aa11.93□□□□□ -0.5
HPS3-205ENST00000478525 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
HPS3-205ENST00000478525 TRIM41Q8WV44 630 aa11.92□□□□□ -0.5
HPS3-205ENST00000478525 DPY19L2Q6NUT2 758 aa11.9□□□□□ -0.5
HPS3-205ENST00000478525 SNPHO15079 494 aa11.86□□□□□ -0.51
HPS3-205ENST00000478525 CDAN1Q8IWY9 1227 aa11.86□□□□□ -0.51
HPS3-205ENST00000478525 RNF25Q96BH1 459 aaPredicted RBP11.85□□□□□ -0.51
HPS3-205ENST00000478525 EFCAB3Q8N7B9 438 aa11.82□□□□□ -0.52
HPS3-205ENST00000478525 TMEM121BQ9BXQ6 578 aaPredicted RBP11.82□□□□□ -0.52
HPS3-205ENST00000478525 BOLA1Q9Y3E2 137 aa11.81□□□□□ -0.52
HPS3-205ENST00000478525 RIOK3O14730 519 aaKnown RBP11.8□□□□□ -0.52
HPS3-205ENST00000478525 MARVELD3Q96A59 401 aa11.79□□□□□ -0.52
HPS3-205ENST00000478525 G3V3G9 751 aa11.77□□□□□ -0.53
HPS3-205ENST00000478525 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.76□□□□□ -0.53
HPS3-205ENST00000478525 ZFP91Q96JP5 570 aaPredicted RBP11.76□□□□□ -0.53
HPS3-205ENST00000478525 VGFO15240 615 aaPredicted RBP11.74□□□□□ -0.53
HPS3-205ENST00000478525 EMP3P54852 163 aa11.69□□□□□ -0.54
HPS3-205ENST00000478525 MS4A4AQ96JQ5 239 aa11.68□□□□□ -0.54
HPS3-205ENST00000478525 SOX12O15370 315 aa11.67□□□□□ -0.54
HPS3-205ENST00000478525 HOXB3P14651 431 aaPredicted RBP11.67□□□□□ -0.54
HPS3-205ENST00000478525 MICALL2Q8IY33 904 aa11.67□□□□□ -0.54
HPS3-205ENST00000478525 PHF8Q9UPP1 1060 aa11.67□□□□□ -0.54
HPS3-205ENST00000478525 POTEB3A0JP26 581 aa11.62□□□□□ -0.55
HPS3-205ENST00000478525 POTEBQ6S5H4 581 aa11.62□□□□□ -0.55
HPS3-205ENST00000478525 TMEM92Q6UXU6 159 aa11.62□□□□□ -0.55
HPS3-205ENST00000478525 HS3ST6Q96QI5 342 aa11.62□□□□□ -0.55
HPS3-205ENST00000478525 BCL11BQ9C0K0 894 aaPredicted RBP11.62□□□□□ -0.55
HPS3-205ENST00000478525 FAM205CA6NFA0 338 aa11.61□□□□□ -0.55
HPS3-205ENST00000478525 ECM2O94769 699 aaPredicted RBP11.59□□□□□ -0.55
HPS3-205ENST00000478525 DOK7Q18PE1 504 aa11.58□□□□□ -0.56
HPS3-205ENST00000478525 STK24Q9Y6E0 443 aa11.58□□□□□ -0.56
HPS3-205ENST00000478525 SPNS2Q8IVW8 549 aa11.57□□□□□ -0.56
HPS3-205ENST00000478525 ZNF710Q8N1W2 664 aa11.57□□□□□ -0.56
HPS3-205ENST00000478525 TAOK2Q9UL54 1235 aa11.57□□□□□ -0.56
HPS3-205ENST00000478525 HOXB1P14653 301 aaPredicted RBP11.56□□□□□ -0.56
HPS3-205ENST00000478525 PKD2Q13563 968 aa11.56□□□□□ -0.56
HPS3-205ENST00000478525 FBXO22Q8NEZ5 403 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms