RNA–Protein interactions for RNA: ENST00000478285.1

TDP2-203, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 2

Gene TDP2, Length 857 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-203ENST00000478285 FAM212AQ96EL1 285 aa15.66■□□□□ 0.1
TDP2-203ENST00000478285 CCDC61Q9Y6R9 512 aa15.66■□□□□ 0.1
TDP2-203ENST00000478285 SPOCK2Q92563 424 aa15.65■□□□□ 0.1
TDP2-203ENST00000478285 PHF12Q96QT6 1004 aa15.65■□□□□ 0.1
TDP2-203ENST00000478285 CLCN6P51797 869 aa15.64■□□□□ 0.09
TDP2-203ENST00000478285 DCAF8Q5TAQ9 597 aa15.58■□□□□ 0.08
TDP2-203ENST00000478285 GSE1Q14687 1217 aa15.53■□□□□ 0.08
TDP2-203ENST00000478285 KIF12Q96FN5 646 aa15.52■□□□□ 0.08
TDP2-203ENST00000478285 GALR2O43603 387 aaPredicted RBP15.51■□□□□ 0.07
TDP2-203ENST00000478285 MS4A3Q96HJ5 214 aa15.47■□□□□ 0.07
TDP2-203ENST00000478285 MAP3K13O43283 966 aa15.45■□□□□ 0.06
TDP2-203ENST00000478285 CIZ1Q9ULV3 898 aaPredicted RBP15.44■□□□□ 0.06
TDP2-203ENST00000478285 PYGBP11216 843 aa15.42■□□□□ 0.06
TDP2-203ENST00000478285 SGIP1Q9BQI5 828 aa15.4■□□□□ 0.06
TDP2-203ENST00000478285 PCDHB13Q9Y5F0 798 aa15.38■□□□□ 0.05
TDP2-203ENST00000478285 DCBLD2Q96PD2 775 aa15.37■□□□□ 0.05
TDP2-203ENST00000478285 POTEIP0CG38 1075 aa15.34■□□□□ 0.05
TDP2-203ENST00000478285 CHRM1P11229 460 aaPredicted RBP15.34■□□□□ 0.05
TDP2-203ENST00000478285 IFNL1Q8IU54 200 aa15.31■□□□□ 0.04
TDP2-203ENST00000478285 TRIM41Q8WV44 630 aa15.3■□□□□ 0.04
TDP2-203ENST00000478285 TRPC6Q9Y210 931 aa15.29■□□□□ 0.04
TDP2-203ENST00000478285 TIE1P35590 1138 aa15.24■□□□□ 0.03
TDP2-203ENST00000478285 ASTLQ6HA08 431 aaPredicted RBP15.23■□□□□ 0.03
TDP2-203ENST00000478285 ZNF467Q7Z7K2 595 aaPredicted RBP15.23■□□□□ 0.03
TDP2-203ENST00000478285 PCDHB8Q9UN66 801 aa15.23■□□□□ 0.03
TDP2-203ENST00000478285 ATMINO43313 823 aaPredicted RBP15.22■□□□□ 0.03
TDP2-203ENST00000478285 BMP2KQ9NSY1 1161 aaPredicted RBP15.22■□□□□ 0.03
TDP2-203ENST00000478285 TTLL13PA6NNM8 815 aa15.16■□□□□ 0.02
TDP2-203ENST00000478285 ATN1P54259 1190 aaPredicted RBP15.15■□□□□ 0.02
TDP2-203ENST00000478285 PKD2Q13563 968 aa15.15■□□□□ 0.02
TDP2-203ENST00000478285 PELP1Q8IZL8 1130 aaKnown RBP15.14■□□□□ 0.01
TDP2-203ENST00000478285 TMEM106CQ9BVX2 250 aa15.13■□□□□ 0.01
TDP2-203ENST00000478285 ECM2O94769 699 aaPredicted RBP15.11■□□□□ 0.01
TDP2-203ENST00000478285 RNF25Q96BH1 459 aaPredicted RBP15.09■□□□□ 0.01
TDP2-203ENST00000478285 PSEN1P49768 467 aa15.07■□□□□ 0
TDP2-203ENST00000478285 PDAP1Q13442 181 aaKnown RBP15.07■□□□□ 0
TDP2-203ENST00000478285 SLC39A7Q92504 469 aa15.06■□□□□ 0
TDP2-203ENST00000478285 TRIM35Q9UPQ4 493 aa15.06■□□□□ 0
TDP2-203ENST00000478285 RIOK3O14730 519 aaKnown RBP15.05■□□□□ -0
TDP2-203ENST00000478285 C7P10643 843 aa15.02■□□□□ -0
TDP2-203ENST00000478285 METRNQ9UJH8 293 aa15.02■□□□□ -0
TDP2-203ENST00000478285 RGL2O15211 777 aa14.97□□□□□ -0.01
TDP2-203ENST00000478285 VGFO15240 615 aaPredicted RBP14.97□□□□□ -0.01
TDP2-203ENST00000478285 IER5LQ5T953 404 aa14.96□□□□□ -0.01
TDP2-203ENST00000478285 TAOK2Q9UL54 1235 aa14.93□□□□□ -0.02
TDP2-203ENST00000478285 LHX8Q68G74 356 aa14.92□□□□□ -0.02
TDP2-203ENST00000478285 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.91□□□□□ -0.02
TDP2-203ENST00000478285 ZFP91Q96JP5 570 aaPredicted RBP14.91□□□□□ -0.02
TDP2-203ENST00000478285 POTEFA5A3E0 1075 aa14.89□□□□□ -0.03
TDP2-203ENST00000478285 GOLGA2Q08379 1002 aa14.89□□□□□ -0.03
TDP2-203ENST00000478285 CABP2Q9NPB3 220 aa14.88□□□□□ -0.03
TDP2-203ENST00000478285 SEC24BO95487 1268 aa14.86□□□□□ -0.03
TDP2-203ENST00000478285 MKRN3Q13064 507 aaKnown RBP14.86□□□□□ -0.03
TDP2-203ENST00000478285 COLQQ9Y215 455 aaPredicted RBP14.86□□□□□ -0.03
TDP2-203ENST00000478285 POTEB2H3BUK9 544 aa14.85□□□□□ -0.03
TDP2-203ENST00000478285 IRX5P78411 483 aaPredicted RBP14.85□□□□□ -0.03
TDP2-203ENST00000478285 PLCG2P16885 1265 aa14.82□□□□□ -0.04
TDP2-203ENST00000478285 AMER1Q5JTC6 1135 aaPredicted RBP14.8□□□□□ -0.04
TDP2-203ENST00000478285 BCL11BQ9C0K0 894 aaPredicted RBP14.8□□□□□ -0.04
TDP2-203ENST00000478285 OCEL1Q9H607 264 aa14.79□□□□□ -0.04
TDP2-203ENST00000478285 STK25O00506 426 aa14.78□□□□□ -0.04
TDP2-203ENST00000478285 EFCAB3Q8N7B9 438 aa14.77□□□□□ -0.05
TDP2-203ENST00000478285 STK24Q9Y6E0 443 aa14.77□□□□□ -0.05
TDP2-203ENST00000478285 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.75□□□□□ -0.057e-8■■■□□ 15.1
TDP2-203ENST00000478285 POTEJP0CG39 1038 aa14.73□□□□□ -0.05
TDP2-203ENST00000478285 ILDR1Q86SU0 546 aaPredicted RBP14.73□□□□□ -0.05
TDP2-203ENST00000478285 PDCD7Q8N8D1 485 aaKnown RBP14.73□□□□□ -0.05
TDP2-203ENST00000478285 RTN4Q9NQC3 1192 aaKnown RBP14.73□□□□□ -0.05
TDP2-203ENST00000478285 SOX12O15370 315 aa14.68□□□□□ -0.06
TDP2-203ENST00000478285 HS6ST3Q8IZP7 471 aa14.67□□□□□ -0.06
TDP2-203ENST00000478285 MAMSTRQ6ZN01 415 aa14.66□□□□□ -0.06
TDP2-203ENST00000478285 OTUD5Q96G74 571 aa14.66□□□□□ -0.06
TDP2-203ENST00000478285 CHGAP10645 457 aaKnown RBP14.63□□□□□ -0.07
TDP2-203ENST00000478285 SCUBE2Q9NQ36 999 aa14.62□□□□□ -0.07
TDP2-203ENST00000478285 PHF8Q9UPP1 1060 aa14.62□□□□□ -0.07
TDP2-203ENST00000478285 DCAF8L2P0C7V8 631 aa14.6□□□□□ -0.07
TDP2-203ENST00000478285 DPY19L2Q6NUT2 758 aa14.6□□□□□ -0.07
TDP2-203ENST00000478285 L3MBTL3Q96JM7 780 aaPredicted RBP14.59□□□□□ -0.07
TDP2-203ENST00000478285 NLRP6P59044 892 aa14.58□□□□□ -0.08
TDP2-203ENST00000478285 MS4A4AQ96JQ5 239 aa14.57□□□□□ -0.08
TDP2-203ENST00000478285 MFRPQ9BY79 579 aa14.57□□□□□ -0.08
TDP2-203ENST00000478285 FBXO22Q8NEZ5 403 aa14.56□□□□□ -0.08
TDP2-203ENST00000478285 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
TDP2-203ENST00000478285 BOLA1Q9Y3E2 137 aa14.52□□□□□ -0.09
TDP2-203ENST00000478285 G3V3G9 751 aa14.49□□□□□ -0.09
TDP2-203ENST00000478285 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.48□□□□□ -0.09
TDP2-203ENST00000478285 C3orf67Q6ZVT6 689 aa14.47□□□□□ -0.09
TDP2-203ENST00000478285 TMEM121BQ9BXQ6 578 aaPredicted RBP14.46□□□□□ -0.09
TDP2-203ENST00000478285 NKX1-1Q15270 411 aaPredicted RBP14.45□□□□□ -0.1
TDP2-203ENST00000478285 MICALL2Q8IY33 904 aa14.43□□□□□ -0.1
TDP2-203ENST00000478285 SLAIN1Q8ND83 568 aa14.43□□□□□ -0.1
TDP2-203ENST00000478285 RYDENQ9NUL5 291 aaKnown RBP14.36□□□□□ -0.11
TDP2-203ENST00000478285 PPP1R37O75864 691 aa14.35□□□□□ -0.11
TDP2-203ENST00000478285 GTPBP6O43824 516 aaPredicted RBP14.29□□□□□ -0.12
TDP2-203ENST00000478285 BBXQ8WY36 941 aaPredicted RBP14.29□□□□□ -0.12
TDP2-203ENST00000478285 TMEM92Q6UXU6 159 aa14.27□□□□□ -0.13
TDP2-203ENST00000478285 SNPHO15079 494 aa14.2□□□□□ -0.14
TDP2-203ENST00000478285 FAM163AQ96GL9 167 aaPredicted RBP14.19□□□□□ -0.14
TDP2-203ENST00000478285 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.17□□□□□ -0.14
TDP2-203ENST00000478285 KIF3CO14782 793 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms