RNA–Protein interactions for RNA: ENST00000478238.1

SYCP3-205, Transcript of synaptonemal complex protein 3, humanhuman

TSL 3

Gene SYCP3, Length 665 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-205ENST00000478238 DCBLD2Q96PD2 775 aa15.68■□□□□ 0.1
SYCP3-205ENST00000478238 VASPP50552 380 aaPredicted RBP15.64■□□□□ 0.09
SYCP3-205ENST00000478238 NUBP1P53384 320 aa15.64■□□□□ 0.09
SYCP3-205ENST00000478238 MS4A3Q96HJ5 214 aa15.62■□□□□ 0.09
SYCP3-205ENST00000478238 KIF12Q96FN5 646 aa15.57■□□□□ 0.08
SYCP3-205ENST00000478238 FAM212AQ96EL1 285 aa15.52■□□□□ 0.08
SYCP3-205ENST00000478238 MAP3K13O43283 966 aa15.5■□□□□ 0.07
SYCP3-205ENST00000478238 KLHL34Q8N239 644 aa15.5■□□□□ 0.07
SYCP3-205ENST00000478238 LHX8Q68G74 356 aa15.48■□□□□ 0.07
SYCP3-205ENST00000478238 DCAF8Q5TAQ9 597 aa15.43■□□□□ 0.06
SYCP3-205ENST00000478238 ASTLQ6HA08 431 aaPredicted RBP15.43■□□□□ 0.06
SYCP3-205ENST00000478238 ATMINO43313 823 aaPredicted RBP15.41■□□□□ 0.06
SYCP3-205ENST00000478238 PELP1Q8IZL8 1130 aaKnown RBP15.41■□□□□ 0.06
SYCP3-205ENST00000478238 TRPC6Q9Y210 931 aa15.4■□□□□ 0.06
SYCP3-205ENST00000478238 PCDHB13Q9Y5F0 798 aa15.39■□□□□ 0.05
SYCP3-205ENST00000478238 IFNLR1Q8IU57 520 aaPredicted RBP15.38■□□□□ 0.05
SYCP3-205ENST00000478238 SGIP1Q9BQI5 828 aa15.38■□□□□ 0.05
SYCP3-205ENST00000478238 BMP2KQ9NSY1 1161 aaPredicted RBP15.34■□□□□ 0.05
SYCP3-205ENST00000478238 TIE1P35590 1138 aa15.33■□□□□ 0.04
SYCP3-205ENST00000478238 ATN1P54259 1190 aaPredicted RBP15.33■□□□□ 0.04
SYCP3-205ENST00000478238 PYGBP11216 843 aa15.31■□□□□ 0.04
SYCP3-205ENST00000478238 GSE1Q14687 1217 aa15.3■□□□□ 0.04
SYCP3-205ENST00000478238 IFNL1Q8IU54 200 aa15.3■□□□□ 0.04
SYCP3-205ENST00000478238 SPOCK2Q92563 424 aa15.3■□□□□ 0.04
SYCP3-205ENST00000478238 SLC39A7Q92504 469 aa15.28■□□□□ 0.04
SYCP3-205ENST00000478238 METRNQ9UJH8 293 aa15.27■□□□□ 0.04
SYCP3-205ENST00000478238 TTLL13PA6NNM8 815 aa15.25■□□□□ 0.03
SYCP3-205ENST00000478238 C7P10643 843 aa15.25■□□□□ 0.03
SYCP3-205ENST00000478238 POTEB2H3BUK9 544 aa15.22■□□□□ 0.03
SYCP3-205ENST00000478238 PCDHB8Q9UN66 801 aa15.17■□□□□ 0.02
SYCP3-205ENST00000478238 TMEM106CQ9BVX2 250 aa15.16■□□□□ 0.02
SYCP3-205ENST00000478238 CIZ1Q9ULV3 898 aaPredicted RBP15.16■□□□□ 0.02
SYCP3-205ENST00000478238 CHRM1P11229 460 aaPredicted RBP15.15■□□□□ 0.02
SYCP3-205ENST00000478238 TRIM35Q9UPQ4 493 aa15.15■□□□□ 0.02
SYCP3-205ENST00000478238 POTEFA5A3E0 1075 aa15.1■□□□□ 0.01
SYCP3-205ENST00000478238 ZNF467Q7Z7K2 595 aaPredicted RBP15.1■□□□□ 0.01
SYCP3-205ENST00000478238 OTUD5Q96G74 571 aa15.09■□□□□ 0.01
SYCP3-205ENST00000478238 IER5LQ5T953 404 aa15.07■□□□□ 0
SYCP3-205ENST00000478238 POTEJP0CG39 1038 aa15.05■□□□□ -0
SYCP3-205ENST00000478238 COLQQ9Y215 455 aaPredicted RBP15.04■□□□□ -0
SYCP3-205ENST00000478238 SEC24BO95487 1268 aa15.03■□□□□ -0
SYCP3-205ENST00000478238 TRIM41Q8WV44 630 aa14.97□□□□□ -0.01
SYCP3-205ENST00000478238 PSEN1P49768 467 aa14.96□□□□□ -0.01
SYCP3-205ENST00000478238 MAMSTRQ6ZN01 415 aa14.96□□□□□ -0.01
SYCP3-205ENST00000478238 IRX5P78411 483 aaPredicted RBP14.93□□□□□ -0.02
SYCP3-205ENST00000478238 PLCG2P16885 1265 aa14.92□□□□□ -0.02
SYCP3-205ENST00000478238 PDAP1Q13442 181 aaKnown RBP14.92□□□□□ -0.02
SYCP3-205ENST00000478238 SCUBE2Q9NQ36 999 aa14.91□□□□□ -0.02
SYCP3-205ENST00000478238 OCEL1Q9H607 264 aa14.87□□□□□ -0.03
SYCP3-205ENST00000478238 GOLGA2Q08379 1002 aa14.86□□□□□ -0.03
SYCP3-205ENST00000478238 MKRN3Q13064 507 aaKnown RBP14.84□□□□□ -0.03
SYCP3-205ENST00000478238 RNF25Q96BH1 459 aaPredicted RBP14.79□□□□□ -0.04
SYCP3-205ENST00000478238 CABP2Q9NPB3 220 aa14.78□□□□□ -0.04
SYCP3-205ENST00000478238 PDCD7Q8N8D1 485 aaKnown RBP14.77□□□□□ -0.05
SYCP3-205ENST00000478238 RIOK3O14730 519 aaKnown RBP14.76□□□□□ -0.05
SYCP3-205ENST00000478238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.74□□□□□ -0.05
SYCP3-205ENST00000478238 VGFO15240 615 aaPredicted RBP14.69□□□□□ -0.06
SYCP3-205ENST00000478238 ILDR1Q86SU0 546 aaPredicted RBP14.68□□□□□ -0.06
SYCP3-205ENST00000478238 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.67□□□□□ -0.06
SYCP3-205ENST00000478238 ZFP91Q96JP5 570 aaPredicted RBP14.67□□□□□ -0.06
SYCP3-205ENST00000478238 SLAIN1Q8ND83 568 aa14.66□□□□□ -0.06
SYCP3-205ENST00000478238 ECM2O94769 699 aaPredicted RBP14.65□□□□□ -0.06
SYCP3-205ENST00000478238 PKD2Q13563 968 aa14.64□□□□□ -0.07
SYCP3-205ENST00000478238 L3MBTL3Q96JM7 780 aaPredicted RBP14.64□□□□□ -0.07
SYCP3-205ENST00000478238 EFCAB3Q8N7B9 438 aa14.63□□□□□ -0.07
SYCP3-205ENST00000478238 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.61□□□□□ -0.07
SYCP3-205ENST00000478238 DPY19L2Q6NUT2 758 aa14.6□□□□□ -0.07
SYCP3-205ENST00000478238 FAM163AQ96GL9 167 aaPredicted RBP14.59□□□□□ -0.07
SYCP3-205ENST00000478238 TAOK2Q9UL54 1235 aa14.58□□□□□ -0.08
SYCP3-205ENST00000478238 LCE2DQ5TA82 110 aaPredicted RBP14.57□□□□□ -0.08
SYCP3-205ENST00000478238 C3orf67Q6ZVT6 689 aa14.56□□□□□ -0.08
SYCP3-205ENST00000478238 POTEMA6NI47 508 aa14.55□□□□□ -0.08
SYCP3-205ENST00000478238 RGL2O15211 777 aa14.54□□□□□ -0.08
SYCP3-205ENST00000478238 POTEGQ6S5H5 508 aa14.52□□□□□ -0.09
SYCP3-205ENST00000478238 BCL11BQ9C0K0 894 aaPredicted RBP14.52□□□□□ -0.09
SYCP3-205ENST00000478238 SOX12O15370 315 aa14.51□□□□□ -0.09
SYCP3-205ENST00000478238 BOLA1Q9Y3E2 137 aa14.51□□□□□ -0.09
SYCP3-205ENST00000478238 G3V3G9 751 aa14.49□□□□□ -0.09
SYCP3-205ENST00000478238 STK24Q9Y6E0 443 aa14.49□□□□□ -0.09
SYCP3-205ENST00000478238 STK25O00506 426 aa14.47□□□□□ -0.09
SYCP3-205ENST00000478238 PHF8Q9UPP1 1060 aa14.47□□□□□ -0.09
SYCP3-205ENST00000478238 MS4A4AQ96JQ5 239 aa14.44□□□□□ -0.1
SYCP3-205ENST00000478238 TMEM121BQ9BXQ6 578 aaPredicted RBP14.42□□□□□ -0.1
SYCP3-205ENST00000478238 ST18O60284 1047 aa14.41□□□□□ -0.1
SYCP3-205ENST00000478238 SNPHO15079 494 aa14.4□□□□□ -0.1
SYCP3-205ENST00000478238 NLRP6P59044 892 aa14.38□□□□□ -0.11
SYCP3-205ENST00000478238 MICALL2Q8IY33 904 aa14.37□□□□□ -0.11
SYCP3-205ENST00000478238 FBXO22Q8NEZ5 403 aa14.36□□□□□ -0.11
SYCP3-205ENST00000478238 MFRPQ9BY79 579 aa14.35□□□□□ -0.11
SYCP3-205ENST00000478238 PCDH10Q9P2E7 1040 aa14.28□□□□□ -0.12
SYCP3-205ENST00000478238 TMEM92Q6UXU6 159 aa14.26□□□□□ -0.13
SYCP3-205ENST00000478238 HS6ST3Q8IZP7 471 aa14.24□□□□□ -0.13
SYCP3-205ENST00000478238 HOXB3P14651 431 aaPredicted RBP14.21□□□□□ -0.13
SYCP3-205ENST00000478238 MARVELD3Q96A59 401 aa14.21□□□□□ -0.13
SYCP3-205ENST00000478238 PLSCR2Q9NRY7 297 aa14.2□□□□□ -0.14
SYCP3-205ENST00000478238 CHGAP10645 457 aaKnown RBP14.18□□□□□ -0.14
SYCP3-205ENST00000478238 CDAN1Q8IWY9 1227 aa14.17□□□□□ -0.14
SYCP3-205ENST00000478238 DOK7Q18PE1 504 aa14.15□□□□□ -0.14
SYCP3-205ENST00000478238 EMP3P54852 163 aa14.13□□□□□ -0.15
SYCP3-205ENST00000478238 PPP1R37O75864 691 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms