RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 TRIM41Q8WV44 630 aa7.44□□□□□ -1.22
FNDC3B-209ENST00000478016 C19orf67A6NJJ6 358 aa7.43□□□□□ -1.22
FNDC3B-209ENST00000478016 HAX1O00165 279 aa7.41□□□□□ -1.22
FNDC3B-209ENST00000478016 ECM2O94769 699 aaPredicted RBP7.41□□□□□ -1.22
FNDC3B-209ENST00000478016 ZRANB1Q9UGI0 708 aa7.4□□□□□ -1.22
FNDC3B-209ENST00000478016 CCDC61Q9Y6R9 512 aa7.39□□□□□ -1.23
FNDC3B-209ENST00000478016 CHRM1P11229 460 aaPredicted RBP7.38□□□□□ -1.23
FNDC3B-209ENST00000478016 PYGBP11216 843 aa7.36□□□□□ -1.23
FNDC3B-209ENST00000478016 ZNF579Q8NAF0 562 aaKnown RBP7.35□□□□□ -1.23
FNDC3B-209ENST00000478016 RGL2O15211 777 aa7.33□□□□□ -1.24
FNDC3B-209ENST00000478016 PHF12Q96QT6 1004 aa7.33□□□□□ -1.24
FNDC3B-209ENST00000478016 EVX2Q03828 476 aa7.32□□□□□ -1.24
FNDC3B-209ENST00000478016 KIF12Q96FN5 646 aa7.32□□□□□ -1.24
FNDC3B-209ENST00000478016 SGIP1Q9BQI5 828 aa7.31□□□□□ -1.24
FNDC3B-209ENST00000478016 RIOK3O14730 519 aaKnown RBP7.3□□□□□ -1.24
FNDC3B-209ENST00000478016 ZNF467Q7Z7K2 595 aaPredicted RBP7.3□□□□□ -1.24
FNDC3B-209ENST00000478016 RNF25Q96BH1 459 aaPredicted RBP7.3□□□□□ -1.24
FNDC3B-209ENST00000478016 MAP3K13O43283 966 aa7.29□□□□□ -1.24
FNDC3B-209ENST00000478016 DCAF8L2P0C7V8 631 aa7.29□□□□□ -1.24
FNDC3B-209ENST00000478016 CLCN6P51797 869 aa7.29□□□□□ -1.24
FNDC3B-209ENST00000478016 TAOK2Q9UL54 1235 aa7.29□□□□□ -1.24
FNDC3B-209ENST00000478016 PCDHB13Q9Y5F0 798 aa7.29□□□□□ -1.24
FNDC3B-209ENST00000478016 IFNL1Q8IU54 200 aa7.26□□□□□ -1.25
FNDC3B-209ENST00000478016 VGFO15240 615 aaPredicted RBP7.25□□□□□ -1.25
FNDC3B-209ENST00000478016 PCDHB8Q9UN66 801 aa7.25□□□□□ -1.25
FNDC3B-209ENST00000478016 MS4A3Q96HJ5 214 aa7.24□□□□□ -1.25
FNDC3B-209ENST00000478016 PDAP1Q13442 181 aaKnown RBP7.23□□□□□ -1.25
FNDC3B-209ENST00000478016 GALR2O43603 387 aaPredicted RBP7.21□□□□□ -1.26
FNDC3B-209ENST00000478016 SP7Q8TDD2 431 aaPredicted RBP7.21□□□□□ -1.26
FNDC3B-209ENST00000478016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.2□□□□□ -1.26
FNDC3B-209ENST00000478016 GABBR2O75899 941 aa7.2□□□□□ -1.26
FNDC3B-209ENST00000478016 CHGAP10645 457 aaKnown RBP7.2□□□□□ -1.26
FNDC3B-209ENST00000478016 PSEN1P49768 467 aa7.2□□□□□ -1.26
FNDC3B-209ENST00000478016 ZFP91Q96JP5 570 aaPredicted RBP7.2□□□□□ -1.26
FNDC3B-209ENST00000478016 STK25O00506 426 aa7.19□□□□□ -1.26
FNDC3B-209ENST00000478016 HS6ST3Q8IZP7 471 aa7.19□□□□□ -1.26
FNDC3B-209ENST00000478016 SLC24A1O60721 1099 aa7.18□□□□□ -1.26
FNDC3B-209ENST00000478016 BCL11BQ9C0K0 894 aaPredicted RBP7.17□□□□□ -1.26
FNDC3B-209ENST00000478016 TRPC6Q9Y210 931 aa7.17□□□□□ -1.26
FNDC3B-209ENST00000478016 TIE1P35590 1138 aa7.16□□□□□ -1.26
FNDC3B-209ENST00000478016 TMEM106CQ9BVX2 250 aa7.16□□□□□ -1.26
FNDC3B-209ENST00000478016 STK24Q9Y6E0 443 aa7.16□□□□□ -1.26
FNDC3B-209ENST00000478016 BMP2KQ9NSY1 1161 aaPredicted RBP7.14□□□□□ -1.27
FNDC3B-209ENST00000478016 TTLL13PA6NNM8 815 aa7.13□□□□□ -1.27
FNDC3B-209ENST00000478016 BBXQ8WY36 941 aaPredicted RBP7.13□□□□□ -1.27
FNDC3B-209ENST00000478016 DCBLD2Q96PD2 775 aa7.12□□□□□ -1.27
FNDC3B-209ENST00000478016 DNAJC5Q9H3Z4 198 aa7.12□□□□□ -1.27
FNDC3B-209ENST00000478016 GOLGA2Q08379 1002 aa7.11□□□□□ -1.27
FNDC3B-209ENST00000478016 ASTLQ6HA08 431 aaPredicted RBP7.11□□□□□ -1.27
FNDC3B-209ENST00000478016 CABP2Q9NPB3 220 aa7.11□□□□□ -1.27
FNDC3B-209ENST00000478016 ATMINO43313 823 aaPredicted RBP7.1□□□□□ -1.27
FNDC3B-209ENST00000478016 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.1□□□□□ -1.27
FNDC3B-209ENST00000478016 ATN1P54259 1190 aaPredicted RBP7.08□□□□□ -1.28
FNDC3B-209ENST00000478016 TRIM35Q9UPQ4 493 aa7.08□□□□□ -1.28
FNDC3B-209ENST00000478016 MKRN3Q13064 507 aaKnown RBP7.07□□□□□ -1.28
FNDC3B-209ENST00000478016 NKX1-1Q15270 411 aaPredicted RBP7.07□□□□□ -1.28
FNDC3B-209ENST00000478016 EFCAB3Q8N7B9 438 aa7.07□□□□□ -1.28
FNDC3B-209ENST00000478016 SOX12O15370 315 aa7.05□□□□□ -1.28
FNDC3B-209ENST00000478016 RYDENQ9NUL5 291 aaKnown RBP7.05□□□□□ -1.28
FNDC3B-209ENST00000478016 IER5LQ5T953 404 aa7.04□□□□□ -1.28
FNDC3B-209ENST00000478016 POTEIP0CG38 1075 aa7.03□□□□□ -1.28
FNDC3B-209ENST00000478016 SPRYD3Q8NCJ5 442 aa7.03□□□□□ -1.28
FNDC3B-209ENST00000478016 NLRP6P59044 892 aa7.02□□□□□ -1.29
FNDC3B-209ENST00000478016 PLCB2Q00722 1185 aa7.02□□□□□ -1.29
FNDC3B-209ENST00000478016 PAXIP1Q6ZW49 1069 aaPredicted RBP7.02□□□□□ -1.29
FNDC3B-209ENST00000478016 PELP1Q8IZL8 1130 aaKnown RBP7.02□□□□□ -1.29
FNDC3B-209ENST00000478016 MFRPQ9BY79 579 aa7.02□□□□□ -1.29
FNDC3B-209ENST00000478016 GTPBP6O43824 516 aaPredicted RBP7.01□□□□□ -1.29
FNDC3B-209ENST00000478016 SLC39A7Q92504 469 aa7.01□□□□□ -1.29
FNDC3B-209ENST00000478016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.01□□□□□ -1.292e-47■□□□□ 8.9
FNDC3B-209ENST00000478016 PHF8Q9UPP1 1060 aa7.01□□□□□ -1.29
FNDC3B-209ENST00000478016 C7P10643 843 aa7□□□□□ -1.29
FNDC3B-209ENST00000478016 FBXO22Q8NEZ5 403 aa7□□□□□ -1.29
FNDC3B-209ENST00000478016 CFAP44Q96MT7 982 aa7□□□□□ -1.29
FNDC3B-209ENST00000478016 ILDR1Q86SU0 546 aaPredicted RBP6.99□□□□□ -1.29
FNDC3B-209ENST00000478016 PLCG2P16885 1265 aa6.98□□□□□ -1.29
FNDC3B-209ENST00000478016 IRX5P78411 483 aaPredicted RBP6.98□□□□□ -1.29
FNDC3B-209ENST00000478016 OCEL1Q9H607 264 aa6.98□□□□□ -1.29
FNDC3B-209ENST00000478016 METRNQ9UJH8 293 aa6.98□□□□□ -1.29
FNDC3B-209ENST00000478016 SEC24BO95487 1268 aa6.97□□□□□ -1.29
FNDC3B-209ENST00000478016 PDCD7Q8N8D1 485 aaKnown RBP6.96□□□□□ -1.3
FNDC3B-209ENST00000478016 MS4A4AQ96JQ5 239 aa6.96□□□□□ -1.3
FNDC3B-209ENST00000478016 COLQQ9Y215 455 aaPredicted RBP6.94□□□□□ -1.3
FNDC3B-209ENST00000478016 PPP1R37O75864 691 aa6.92□□□□□ -1.3
FNDC3B-209ENST00000478016 POTEFA5A3E0 1075 aa6.91□□□□□ -1.3
FNDC3B-209ENST00000478016 DPY19L2Q6NUT2 758 aa6.91□□□□□ -1.3
FNDC3B-209ENST00000478016 HAP1P54257 671 aaPredicted RBP6.9□□□□□ -1.3
FNDC3B-209ENST00000478016 L3MBTL3Q96JM7 780 aaPredicted RBP6.9□□□□□ -1.3
FNDC3B-209ENST00000478016 G3V3G9 751 aa6.89□□□□□ -1.31
FNDC3B-209ENST00000478016 BOLA1Q9Y3E2 137 aa6.89□□□□□ -1.31
FNDC3B-209ENST00000478016 TSHZ2Q9NRE2 1034 aa6.88□□□□□ -1.31
FNDC3B-209ENST00000478016 MICALL2Q8IY33 904 aa6.87□□□□□ -1.31
FNDC3B-209ENST00000478016 TMEM121BQ9BXQ6 578 aaPredicted RBP6.86□□□□□ -1.31
FNDC3B-209ENST00000478016 C3orf67Q6ZVT6 689 aa6.83□□□□□ -1.32
FNDC3B-209ENST00000478016 CADPS2Q86UW7 1296 aa6.82□□□□□ -1.32
FNDC3B-209ENST00000478016 POTEB2H3BUK9 544 aa6.81□□□□□ -1.32
FNDC3B-209ENST00000478016 VSIG10Q8N0Z9 540 aa6.81□□□□□ -1.32
FNDC3B-209ENST00000478016 MAMSTRQ6ZN01 415 aa6.8□□□□□ -1.32
FNDC3B-209ENST00000478016 POTEJP0CG39 1038 aa6.79□□□□□ -1.32
FNDC3B-209ENST00000478016 SCUBE2Q9NQ36 999 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms