RNA–Protein interactions for RNA: ENST00000477455.5

MTHFD2-206, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

TSL 3

Gene MTHFD2, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-206ENST00000477455 PHF12Q96QT6 1004 aa16.67■□□□□ 0.26
MTHFD2-206ENST00000477455 IFNLR1Q8IU57 520 aaPredicted RBP16.61■□□□□ 0.25
MTHFD2-206ENST00000477455 CCDC61Q9Y6R9 512 aa16.61■□□□□ 0.25
MTHFD2-206ENST00000477455 FAM212AQ96EL1 285 aa16.58■□□□□ 0.24
MTHFD2-206ENST00000477455 GALR2O43603 387 aaPredicted RBP16.54■□□□□ 0.24
MTHFD2-206ENST00000477455 DCAF8Q5TAQ9 597 aa16.51■□□□□ 0.23
MTHFD2-206ENST00000477455 SPOCK2Q92563 424 aa16.48■□□□□ 0.23
MTHFD2-206ENST00000477455 KIF12Q96FN5 646 aa16.47■□□□□ 0.23
MTHFD2-206ENST00000477455 MS4A3Q96HJ5 214 aa16.46■□□□□ 0.23
MTHFD2-206ENST00000477455 DCBLD2Q96PD2 775 aa16.45■□□□□ 0.22
MTHFD2-206ENST00000477455 MAP3K13O43283 966 aa16.42■□□□□ 0.22
MTHFD2-206ENST00000477455 POTEIP0CG38 1075 aa16.4■□□□□ 0.22
MTHFD2-206ENST00000477455 GSE1Q14687 1217 aa16.4■□□□□ 0.22
MTHFD2-206ENST00000477455 PYGBP11216 843 aa16.35■□□□□ 0.21
MTHFD2-206ENST00000477455 PCDHB13Q9Y5F0 798 aa16.34■□□□□ 0.21
MTHFD2-206ENST00000477455 SGIP1Q9BQI5 828 aa16.32■□□□□ 0.2
MTHFD2-206ENST00000477455 CIZ1Q9ULV3 898 aaPredicted RBP16.32■□□□□ 0.2
MTHFD2-206ENST00000477455 TRPC6Q9Y210 931 aa16.26■□□□□ 0.19
MTHFD2-206ENST00000477455 IFNL1Q8IU54 200 aa16.25■□□□□ 0.19
MTHFD2-206ENST00000477455 ASTLQ6HA08 431 aaPredicted RBP16.23■□□□□ 0.19
MTHFD2-206ENST00000477455 ATMINO43313 823 aaPredicted RBP16.21■□□□□ 0.19
MTHFD2-206ENST00000477455 CHRM1P11229 460 aaPredicted RBP16.19■□□□□ 0.18
MTHFD2-206ENST00000477455 TIE1P35590 1138 aa16.19■□□□□ 0.18
MTHFD2-206ENST00000477455 BMP2KQ9NSY1 1161 aaPredicted RBP16.18■□□□□ 0.18
MTHFD2-206ENST00000477455 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
MTHFD2-206ENST00000477455 PCDHB8Q9UN66 801 aa16.16■□□□□ 0.18
MTHFD2-206ENST00000477455 ATN1P54259 1190 aaPredicted RBP16.15■□□□□ 0.18
MTHFD2-206ENST00000477455 TTLL13PA6NNM8 815 aa16.11■□□□□ 0.17
MTHFD2-206ENST00000477455 ZNF467Q7Z7K2 595 aaPredicted RBP16.11■□□□□ 0.17
MTHFD2-206ENST00000477455 TRIM41Q8WV44 630 aa16.1■□□□□ 0.17
MTHFD2-206ENST00000477455 TMEM106CQ9BVX2 250 aa16.07■□□□□ 0.16
MTHFD2-206ENST00000477455 SLC39A7Q92504 469 aa16.06■□□□□ 0.16
MTHFD2-206ENST00000477455 LHX8Q68G74 356 aa16.04■□□□□ 0.16
MTHFD2-206ENST00000477455 METRNQ9UJH8 293 aa16.03■□□□□ 0.16
MTHFD2-206ENST00000477455 TRIM35Q9UPQ4 493 aa16.03■□□□□ 0.16
MTHFD2-206ENST00000477455 C7P10643 843 aa16.02■□□□□ 0.16
MTHFD2-206ENST00000477455 PSEN1P49768 467 aa15.95■□□□□ 0.14
MTHFD2-206ENST00000477455 PDAP1Q13442 181 aaKnown RBP15.94■□□□□ 0.14
MTHFD2-206ENST00000477455 ECM2O94769 699 aaPredicted RBP15.9■□□□□ 0.14
MTHFD2-206ENST00000477455 IER5LQ5T953 404 aa15.9■□□□□ 0.14
MTHFD2-206ENST00000477455 RNF25Q96BH1 459 aaPredicted RBP15.89■□□□□ 0.13
MTHFD2-206ENST00000477455 POTEB2H3BUK9 544 aa15.88■□□□□ 0.13
MTHFD2-206ENST00000477455 SEC24BO95487 1268 aa15.88■□□□□ 0.13
MTHFD2-206ENST00000477455 PKD2Q13563 968 aa15.88■□□□□ 0.13
MTHFD2-206ENST00000477455 RIOK3O14730 519 aaKnown RBP15.87■□□□□ 0.13
MTHFD2-206ENST00000477455 POTEFA5A3E0 1075 aa15.85■□□□□ 0.13
MTHFD2-206ENST00000477455 GOLGA2Q08379 1002 aa15.85■□□□□ 0.13
MTHFD2-206ENST00000477455 COLQQ9Y215 455 aaPredicted RBP15.84■□□□□ 0.13
MTHFD2-206ENST00000477455 MKRN3Q13064 507 aaKnown RBP15.79■□□□□ 0.12
MTHFD2-206ENST00000477455 VGFO15240 615 aaPredicted RBP15.78■□□□□ 0.12
MTHFD2-206ENST00000477455 PLCG2P16885 1265 aa15.77■□□□□ 0.12
MTHFD2-206ENST00000477455 IRX5P78411 483 aaPredicted RBP15.77■□□□□ 0.12
MTHFD2-206ENST00000477455 CABP2Q9NPB3 220 aa15.77■□□□□ 0.12
MTHFD2-206ENST00000477455 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.74■□□□□ 0.11
MTHFD2-206ENST00000477455 POTEJP0CG39 1038 aa15.74■□□□□ 0.11
MTHFD2-206ENST00000477455 ZFP91Q96JP5 570 aaPredicted RBP15.74■□□□□ 0.11
MTHFD2-206ENST00000477455 RGL2O15211 777 aa15.73■□□□□ 0.11
MTHFD2-206ENST00000477455 OCEL1Q9H607 264 aa15.73■□□□□ 0.11
MTHFD2-206ENST00000477455 TAOK2Q9UL54 1235 aa15.73■□□□□ 0.11
MTHFD2-206ENST00000477455 OTUD5Q96G74 571 aa15.72■□□□□ 0.11
MTHFD2-206ENST00000477455 MAMSTRQ6ZN01 415 aa15.67■□□□□ 0.1
MTHFD2-206ENST00000477455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.67■□□□□ 0.17e-10■■□□□ 12.1
MTHFD2-206ENST00000477455 EFCAB3Q8N7B9 438 aa15.64■□□□□ 0.09
MTHFD2-206ENST00000477455 SCUBE2Q9NQ36 999 aa15.64■□□□□ 0.09
MTHFD2-206ENST00000477455 PDCD7Q8N8D1 485 aaKnown RBP15.63■□□□□ 0.09
MTHFD2-206ENST00000477455 BCL11BQ9C0K0 894 aaPredicted RBP15.61■□□□□ 0.09
MTHFD2-206ENST00000477455 STK25O00506 426 aa15.6■□□□□ 0.09
MTHFD2-206ENST00000477455 STK24Q9Y6E0 443 aa15.59■□□□□ 0.09
MTHFD2-206ENST00000477455 ILDR1Q86SU0 546 aaPredicted RBP15.58■□□□□ 0.08
MTHFD2-206ENST00000477455 SOX12O15370 315 aa15.52■□□□□ 0.08
MTHFD2-206ENST00000477455 DPY19L2Q6NUT2 758 aa15.51■□□□□ 0.07
MTHFD2-206ENST00000477455 L3MBTL3Q96JM7 780 aaPredicted RBP15.5■□□□□ 0.07
MTHFD2-206ENST00000477455 PHF8Q9UPP1 1060 aa15.46■□□□□ 0.07
MTHFD2-206ENST00000477455 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.43■□□□□ 0.06
MTHFD2-206ENST00000477455 G3V3G9 751 aa15.42■□□□□ 0.06
MTHFD2-206ENST00000477455 SLAIN1Q8ND83 568 aa15.42■□□□□ 0.06
MTHFD2-206ENST00000477455 C3orf67Q6ZVT6 689 aa15.41■□□□□ 0.06
MTHFD2-206ENST00000477455 BOLA1Q9Y3E2 137 aa15.41■□□□□ 0.06
MTHFD2-206ENST00000477455 CHGAP10645 457 aaKnown RBP15.4■□□□□ 0.06
MTHFD2-206ENST00000477455 NLRP6P59044 892 aa15.4■□□□□ 0.06
MTHFD2-206ENST00000477455 MS4A4AQ96JQ5 239 aa15.4■□□□□ 0.06
MTHFD2-206ENST00000477455 HS6ST3Q8IZP7 471 aa15.39■□□□□ 0.05
MTHFD2-206ENST00000477455 MFRPQ9BY79 579 aa15.38■□□□□ 0.05
MTHFD2-206ENST00000477455 FBXO22Q8NEZ5 403 aa15.36■□□□□ 0.05
MTHFD2-206ENST00000477455 DCAF8L2P0C7V8 631 aa15.34■□□□□ 0.05
MTHFD2-206ENST00000477455 AMER1Q5JTC6 1135 aaPredicted RBP15.34■□□□□ 0.05
MTHFD2-206ENST00000477455 TMEM121BQ9BXQ6 578 aaPredicted RBP15.3■□□□□ 0.04
MTHFD2-206ENST00000477455 MICALL2Q8IY33 904 aa15.29■□□□□ 0.04
MTHFD2-206ENST00000477455 RTN4Q9NQC3 1192 aaKnown RBP15.26■□□□□ 0.03
MTHFD2-206ENST00000477455 FAM163AQ96GL9 167 aaPredicted RBP15.24■□□□□ 0.03
MTHFD2-206ENST00000477455 DNAJC5Q9H3Z4 198 aa15.21■□□□□ 0.03
MTHFD2-206ENST00000477455 NKX1-1Q15270 411 aaPredicted RBP15.17■□□□□ 0.02
MTHFD2-206ENST00000477455 SNPHO15079 494 aa15.16■□□□□ 0.02
MTHFD2-206ENST00000477455 PPP1R37O75864 691 aa15.14■□□□□ 0.01
MTHFD2-206ENST00000477455 LCE2DQ5TA82 110 aaPredicted RBP15.13■□□□□ 0.01
MTHFD2-206ENST00000477455 TMEM92Q6UXU6 159 aa15.12■□□□□ 0.01
MTHFD2-206ENST00000477455 RYDENQ9NUL5 291 aaKnown RBP15.09■□□□□ 0.01
MTHFD2-206ENST00000477455 ST18O60284 1047 aa15.08■□□□□ 0
MTHFD2-206ENST00000477455 POTEMA6NI47 508 aa15.07■□□□□ 0
MTHFD2-206ENST00000477455 POTEGQ6S5H5 508 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms