RNA–Protein interactions for RNA: ENST00000477215.5

SYCP1-205, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-205ENST00000477215 C7P10643 843 aa14.13□□□□□ -0.15
SYCP1-205ENST00000477215 ASTLQ6HA08 431 aaPredicted RBP14.13□□□□□ -0.15
SYCP1-205ENST00000477215 MAMSTRQ6ZN01 415 aa14.12□□□□□ -0.15
SYCP1-205ENST00000477215 MS4A3Q96HJ5 214 aa14.11□□□□□ -0.15
SYCP1-205ENST00000477215 ATMINO43313 823 aaPredicted RBP14.09□□□□□ -0.15
SYCP1-205ENST00000477215 MNX1P50219 401 aaPredicted RBP14.09□□□□□ -0.15
SYCP1-205ENST00000477215 POTEJP0CG39 1038 aa14.05□□□□□ -0.16
SYCP1-205ENST00000477215 SCUBE2Q9NQ36 999 aa14.02□□□□□ -0.17
SYCP1-205ENST00000477215 FAM163AQ96GL9 167 aaPredicted RBP14.01□□□□□ -0.17
SYCP1-205ENST00000477215 TSPYL2Q9H2G4 693 aaPredicted RBP13.95□□□□□ -0.18
SYCP1-205ENST00000477215 LCE2DQ5TA82 110 aaPredicted RBP13.94□□□□□ -0.18
SYCP1-205ENST00000477215 ATN1P54259 1190 aaPredicted RBP13.93□□□□□ -0.18
SYCP1-205ENST00000477215 CCDC61Q9Y6R9 512 aa13.87□□□□□ -0.19
SYCP1-205ENST00000477215 KIF12Q96FN5 646 aa13.82□□□□□ -0.2
SYCP1-205ENST00000477215 BMP2KQ9NSY1 1161 aaPredicted RBP13.81□□□□□ -0.2
SYCP1-205ENST00000477215 POTEFA5A3E0 1075 aa13.8□□□□□ -0.2
SYCP1-205ENST00000477215 TIE1P35590 1138 aa13.76□□□□□ -0.21
SYCP1-205ENST00000477215 SEC24BO95487 1268 aa13.75□□□□□ -0.21
SYCP1-205ENST00000477215 TRPC6Q9Y210 931 aa13.75□□□□□ -0.21
SYCP1-205ENST00000477215 MAP3K13O43283 966 aa13.72□□□□□ -0.21
SYCP1-205ENST00000477215 CDAN1Q8IWY9 1227 aa13.72□□□□□ -0.21
SYCP1-205ENST00000477215 PLEKHG5O94827 1062 aa13.69□□□□□ -0.22
SYCP1-205ENST00000477215 COLQQ9Y215 455 aaPredicted RBP13.68□□□□□ -0.22
SYCP1-205ENST00000477215 TTLL13PA6NNM8 815 aa13.66□□□□□ -0.22
SYCP1-205ENST00000477215 PROM2Q8N271 834 aa13.62□□□□□ -0.23
SYCP1-205ENST00000477215 RASEFQ8IZ41 740 aa13.61□□□□□ -0.23
SYCP1-205ENST00000477215 IER5LQ5T953 404 aa13.6□□□□□ -0.23
SYCP1-205ENST00000477215 MIER1Q8N108 512 aa13.59□□□□□ -0.23
SYCP1-205ENST00000477215 TRIM35Q9UPQ4 493 aa13.59□□□□□ -0.23
SYCP1-205ENST00000477215 SLAIN1Q8ND83 568 aa13.58□□□□□ -0.24
SYCP1-205ENST00000477215 ST18O60284 1047 aa13.55□□□□□ -0.24
SYCP1-205ENST00000477215 SGIP1Q9BQI5 828 aa13.53□□□□□ -0.24
SYCP1-205ENST00000477215 PCDHB13Q9Y5F0 798 aa13.53□□□□□ -0.24
SYCP1-205ENST00000477215 PLCG2P16885 1265 aa13.46□□□□□ -0.25
SYCP1-205ENST00000477215 FKBP8Q14318 412 aa13.45□□□□□ -0.26
SYCP1-205ENST00000477215 MMRN1Q13201 1228 aa13.42□□□□□ -0.26
SYCP1-205ENST00000477215 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
SYCP1-205ENST00000477215 TMEM106CQ9BVX2 250 aa13.42□□□□□ -0.26
SYCP1-205ENST00000477215 IFNL1Q8IU54 200 aa13.4□□□□□ -0.26
SYCP1-205ENST00000477215 SPNS2Q8IVW8 549 aa13.38□□□□□ -0.27
SYCP1-205ENST00000477215 TMEM121BQ9BXQ6 578 aaPredicted RBP13.38□□□□□ -0.27
SYCP1-205ENST00000477215 ZBTB47Q9UFB7 747 aaPredicted RBP13.37□□□□□ -0.27
SYCP1-205ENST00000477215 SNPHO15079 494 aa13.34□□□□□ -0.27
SYCP1-205ENST00000477215 IRX5P78411 483 aaPredicted RBP13.33□□□□□ -0.28
SYCP1-205ENST00000477215 NUBP1P53384 320 aa13.32□□□□□ -0.28
SYCP1-205ENST00000477215 FAM212AQ96EL1 285 aa13.31□□□□□ -0.28
SYCP1-205ENST00000477215 OCEL1Q9H607 264 aa13.29□□□□□ -0.28
SYCP1-205ENST00000477215 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.29□□□□□ -0.28
SYCP1-205ENST00000477215 MARVELD3Q96A59 401 aa13.28□□□□□ -0.28
SYCP1-205ENST00000477215 EMP3P54852 163 aa13.15□□□□□ -0.3
SYCP1-205ENST00000477215 PYGBP11216 843 aa13.13□□□□□ -0.31
SYCP1-205ENST00000477215 C3orf67Q6ZVT6 689 aa13.13□□□□□ -0.31
SYCP1-205ENST00000477215 DCAF8Q5TAQ9 597 aa13.12□□□□□ -0.31
SYCP1-205ENST00000477215 PCDHB8Q9UN66 801 aa13.09□□□□□ -0.31
SYCP1-205ENST00000477215 HS3ST6Q96QI5 342 aa13.06□□□□□ -0.32
SYCP1-205ENST00000477215 L3MBTL3Q96JM7 780 aaPredicted RBP13.05□□□□□ -0.32
SYCP1-205ENST00000477215 FAM205CA6NFA0 338 aa13.04□□□□□ -0.32
SYCP1-205ENST00000477215 GOLGA2Q08379 1002 aa13.04□□□□□ -0.32
SYCP1-205ENST00000477215 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
SYCP1-205ENST00000477215 KRTAP3-3Q9BYR6 98 aa13.03□□□□□ -0.32
SYCP1-205ENST00000477215 KRTAP3-2Q9BYR7 98 aa13.03□□□□□ -0.32
SYCP1-205ENST00000477215 FBXO3Q9UK99 471 aa13.03□□□□□ -0.32
SYCP1-205ENST00000477215 MKRN3Q13064 507 aaKnown RBP13.02□□□□□ -0.33
SYCP1-205ENST00000477215 POTEB3A0JP26 581 aa12.99□□□□□ -0.33
SYCP1-205ENST00000477215 POTEBQ6S5H4 581 aa12.99□□□□□ -0.33
SYCP1-205ENST00000477215 ZNF467Q7Z7K2 595 aaPredicted RBP12.94□□□□□ -0.34
SYCP1-205ENST00000477215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.94□□□□□ -0.34
SYCP1-205ENST00000477215 VASPP50552 380 aaPredicted RBP12.85□□□□□ -0.35
SYCP1-205ENST00000477215 GSE1Q14687 1217 aa12.85□□□□□ -0.35
SYCP1-205ENST00000477215 G3V3G9 751 aa12.83□□□□□ -0.36
SYCP1-205ENST00000477215 PSEN1P49768 467 aa12.83□□□□□ -0.36
SYCP1-205ENST00000477215 ZNF710Q8N1W2 664 aa12.8□□□□□ -0.36
SYCP1-205ENST00000477215 KLHL34Q8N239 644 aa12.79□□□□□ -0.36
SYCP1-205ENST00000477215 RNF166Q96A37 237 aaPredicted RBP12.79□□□□□ -0.36
SYCP1-205ENST00000477215 ERBB3P21860 1342 aa12.78□□□□□ -0.36
SYCP1-205ENST00000477215 HOXB3P14651 431 aaPredicted RBP12.77□□□□□ -0.37
SYCP1-205ENST00000477215 HOXB1P14653 301 aaPredicted RBP12.77□□□□□ -0.37
SYCP1-205ENST00000477215 DPY19L2Q6NUT2 758 aa12.77□□□□□ -0.37
SYCP1-205ENST00000477215 CHRM1P11229 460 aaPredicted RBP12.76□□□□□ -0.37
SYCP1-205ENST00000477215 BOLA1Q9Y3E2 137 aa12.76□□□□□ -0.37
SYCP1-205ENST00000477215 ILDR1Q86SU0 546 aaPredicted RBP12.75□□□□□ -0.37
SYCP1-205ENST00000477215 DOK7Q18PE1 504 aa12.73□□□□□ -0.37
SYCP1-205ENST00000477215 PDAP1Q13442 181 aaKnown RBP12.71□□□□□ -0.37
SYCP1-205ENST00000477215 RIMBP2O15034 1052 aa12.69□□□□□ -0.38
SYCP1-205ENST00000477215 CABP2Q9NPB3 220 aa12.69□□□□□ -0.38
SYCP1-205ENST00000477215 MYT1LQ9UL68 1186 aa12.69□□□□□ -0.38
SYCP1-205ENST00000477215 VARS2Q5ST30 1063 aaKnown RBP12.66□□□□□ -0.38
SYCP1-205ENST00000477215 IFNLR1Q8IU57 520 aaPredicted RBP12.63□□□□□ -0.39
SYCP1-205ENST00000477215 ZNF687Q8N1G0 1237 aa12.57□□□□□ -0.4
SYCP1-205ENST00000477215 PTGER2P43116 358 aa12.56□□□□□ -0.4
SYCP1-205ENST00000477215 SPOCK2Q92563 424 aa12.56□□□□□ -0.4
SYCP1-205ENST00000477215 ZSWIM6Q9HCJ5 1215 aa12.54□□□□□ -0.4
SYCP1-205ENST00000477215 CIZ1Q9ULV3 898 aaPredicted RBP12.51□□□□□ -0.41
SYCP1-205ENST00000477215 GPR153Q6NV75 609 aa12.46□□□□□ -0.41
SYCP1-205ENST00000477215 ANKRD13DQ6ZTN6 518 aa12.46□□□□□ -0.41
SYCP1-205ENST00000477215 EFCAB3Q8N7B9 438 aa12.45□□□□□ -0.42
SYCP1-205ENST00000477215 MICALL2Q8IY33 904 aa12.44□□□□□ -0.42
SYCP1-205ENST00000477215 TMEM92Q6UXU6 159 aa12.42□□□□□ -0.42
SYCP1-205ENST00000477215 ARSIQ5FYB1 569 aa12.37□□□□□ -0.43
SYCP1-205ENST00000477215 LSM11P83369 360 aaKnown RBP eCLIP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms