RNA–Protein interactions for RNA: ENST00000476559.2

RPGR-207, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 1,047 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-207ENST00000476559 CCDC61Q9Y6R9 512 aa17.66■□□□□ 0.42
RPGR-207ENST00000476559 FAM212AQ96EL1 285 aa17.64■□□□□ 0.41
RPGR-207ENST00000476559 DCAF8Q5TAQ9 597 aa17.61■□□□□ 0.41
RPGR-207ENST00000476559 CLCN6P51797 869 aa17.59■□□□□ 0.41
RPGR-207ENST00000476559 SPOCK2Q92563 424 aa17.59■□□□□ 0.41
RPGR-207ENST00000476559 GALR2O43603 387 aaPredicted RBP17.57■□□□□ 0.4
RPGR-207ENST00000476559 KIF12Q96FN5 646 aa17.52■□□□□ 0.4
RPGR-207ENST00000476559 MS4A3Q96HJ5 214 aa17.5■□□□□ 0.39
RPGR-207ENST00000476559 MAP3K13O43283 966 aa17.48■□□□□ 0.39
RPGR-207ENST00000476559 GSE1Q14687 1217 aa17.45■□□□□ 0.38
RPGR-207ENST00000476559 CIZ1Q9ULV3 898 aaPredicted RBP17.44■□□□□ 0.38
RPGR-207ENST00000476559 PYGBP11216 843 aa17.43■□□□□ 0.38
RPGR-207ENST00000476559 DCBLD2Q96PD2 775 aa17.43■□□□□ 0.38
RPGR-207ENST00000476559 POTEIP0CG38 1075 aa17.4■□□□□ 0.38
RPGR-207ENST00000476559 PCDHB13Q9Y5F0 798 aa17.38■□□□□ 0.37
RPGR-207ENST00000476559 TRPC6Q9Y210 931 aa17.32■□□□□ 0.36
RPGR-207ENST00000476559 IFNL1Q8IU54 200 aa17.3■□□□□ 0.36
RPGR-207ENST00000476559 SGIP1Q9BQI5 828 aa17.3■□□□□ 0.36
RPGR-207ENST00000476559 PCDHB8Q9UN66 801 aa17.24■□□□□ 0.35
RPGR-207ENST00000476559 CHRM1P11229 460 aaPredicted RBP17.22■□□□□ 0.35
RPGR-207ENST00000476559 ATMINO43313 823 aaPredicted RBP17.21■□□□□ 0.35
RPGR-207ENST00000476559 BMP2KQ9NSY1 1161 aaPredicted RBP17.2■□□□□ 0.34
RPGR-207ENST00000476559 ASTLQ6HA08 431 aaPredicted RBP17.19■□□□□ 0.34
RPGR-207ENST00000476559 PELP1Q8IZL8 1130 aaKnown RBP17.19■□□□□ 0.34
RPGR-207ENST00000476559 TIE1P35590 1138 aa17.17■□□□□ 0.34
RPGR-207ENST00000476559 ATN1P54259 1190 aaPredicted RBP17.16■□□□□ 0.34
RPGR-207ENST00000476559 TTLL13PA6NNM8 815 aa17.13■□□□□ 0.33
RPGR-207ENST00000476559 ZNF467Q7Z7K2 595 aaPredicted RBP17.13■□□□□ 0.33
RPGR-207ENST00000476559 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
RPGR-207ENST00000476559 TMEM106CQ9BVX2 250 aa17.11■□□□□ 0.33
RPGR-207ENST00000476559 TRIM35Q9UPQ4 493 aa17.03■□□□□ 0.32
RPGR-207ENST00000476559 PKD2Q13563 968 aa17.01■□□□□ 0.31
RPGR-207ENST00000476559 SLC39A7Q92504 469 aa17.01■□□□□ 0.31
RPGR-207ENST00000476559 METRNQ9UJH8 293 aa17.01■□□□□ 0.31
RPGR-207ENST00000476559 PSEN1P49768 467 aa17■□□□□ 0.31
RPGR-207ENST00000476559 ECM2O94769 699 aaPredicted RBP16.99■□□□□ 0.31
RPGR-207ENST00000476559 C7P10643 843 aa16.98■□□□□ 0.31
RPGR-207ENST00000476559 PDAP1Q13442 181 aaKnown RBP16.97■□□□□ 0.31
RPGR-207ENST00000476559 LHX8Q68G74 356 aa16.97■□□□□ 0.31
RPGR-207ENST00000476559 RNF25Q96BH1 459 aaPredicted RBP16.97■□□□□ 0.31
RPGR-207ENST00000476559 RIOK3O14730 519 aaKnown RBP16.93■□□□□ 0.3
RPGR-207ENST00000476559 POTEB2H3BUK9 544 aa16.86■□□□□ 0.29
RPGR-207ENST00000476559 SEC24BO95487 1268 aa16.86■□□□□ 0.29
RPGR-207ENST00000476559 POTEFA5A3E0 1075 aa16.85■□□□□ 0.29
RPGR-207ENST00000476559 GOLGA2Q08379 1002 aa16.85■□□□□ 0.29
RPGR-207ENST00000476559 IER5LQ5T953 404 aa16.85■□□□□ 0.29
RPGR-207ENST00000476559 COLQQ9Y215 455 aaPredicted RBP16.85■□□□□ 0.29
RPGR-207ENST00000476559 RGL2O15211 777 aa16.84■□□□□ 0.29
RPGR-207ENST00000476559 VGFO15240 615 aaPredicted RBP16.81■□□□□ 0.28
RPGR-207ENST00000476559 CABP2Q9NPB3 220 aa16.81■□□□□ 0.28
RPGR-207ENST00000476559 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.8■□□□□ 0.28
RPGR-207ENST00000476559 ZFP91Q96JP5 570 aaPredicted RBP16.8■□□□□ 0.28
RPGR-207ENST00000476559 MKRN3Q13064 507 aaKnown RBP16.78■□□□□ 0.28
RPGR-207ENST00000476559 PLCG2P16885 1265 aa16.75■□□□□ 0.27
RPGR-207ENST00000476559 IRX5P78411 483 aaPredicted RBP16.75■□□□□ 0.27
RPGR-207ENST00000476559 POTEJP0CG39 1038 aa16.72■□□□□ 0.27
RPGR-207ENST00000476559 TAOK2Q9UL54 1235 aa16.72■□□□□ 0.27
RPGR-207ENST00000476559 OCEL1Q9H607 264 aa16.71■□□□□ 0.27
RPGR-207ENST00000476559 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.68■□□□□ 0.26
RPGR-207ENST00000476559 EFCAB3Q8N7B9 438 aa16.67■□□□□ 0.26
RPGR-207ENST00000476559 BCL11BQ9C0K0 894 aaPredicted RBP16.67■□□□□ 0.26
RPGR-207ENST00000476559 STK24Q9Y6E0 443 aa16.66■□□□□ 0.26
RPGR-207ENST00000476559 STK25O00506 426 aa16.65■□□□□ 0.26
RPGR-207ENST00000476559 OTUD5Q96G74 571 aa16.65■□□□□ 0.26
RPGR-207ENST00000476559 PDCD7Q8N8D1 485 aaKnown RBP16.62■□□□□ 0.25
RPGR-207ENST00000476559 MAMSTRQ6ZN01 415 aa16.57■□□□□ 0.24
RPGR-207ENST00000476559 DPY19L2Q6NUT2 758 aa16.55■□□□□ 0.24
RPGR-207ENST00000476559 SCUBE2Q9NQ36 999 aa16.55■□□□□ 0.24
RPGR-207ENST00000476559 ILDR1Q86SU0 546 aaPredicted RBP16.54■□□□□ 0.24
RPGR-207ENST00000476559 SOX12O15370 315 aa16.51■□□□□ 0.23
RPGR-207ENST00000476559 PHF8Q9UPP1 1060 aa16.5■□□□□ 0.23
RPGR-207ENST00000476559 CHGAP10645 457 aaKnown RBP16.49■□□□□ 0.23
RPGR-207ENST00000476559 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
RPGR-207ENST00000476559 AMER1Q5JTC6 1135 aaPredicted RBP16.47■□□□□ 0.23
RPGR-207ENST00000476559 RTN4Q9NQC3 1192 aaKnown RBP16.47■□□□□ 0.23
RPGR-207ENST00000476559 L3MBTL3Q96JM7 780 aaPredicted RBP16.46■□□□□ 0.23
RPGR-207ENST00000476559 HS6ST3Q8IZP7 471 aa16.44■□□□□ 0.22
RPGR-207ENST00000476559 MS4A4AQ96JQ5 239 aa16.42■□□□□ 0.22
RPGR-207ENST00000476559 NLRP6P59044 892 aa16.41■□□□□ 0.22
RPGR-207ENST00000476559 MFRPQ9BY79 579 aa16.41■□□□□ 0.22
RPGR-207ENST00000476559 BOLA1Q9Y3E2 137 aa16.39■□□□□ 0.21
RPGR-207ENST00000476559 G3V3G9 751 aa16.38■□□□□ 0.21
RPGR-207ENST00000476559 SLAIN1Q8ND83 568 aa16.37■□□□□ 0.21
RPGR-207ENST00000476559 FBXO22Q8NEZ5 403 aa16.37■□□□□ 0.21
RPGR-207ENST00000476559 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.37■□□□□ 0.21
RPGR-207ENST00000476559 C3orf67Q6ZVT6 689 aa16.36■□□□□ 0.21
RPGR-207ENST00000476559 MICALL2Q8IY33 904 aa16.27■□□□□ 0.2
RPGR-207ENST00000476559 TMEM121BQ9BXQ6 578 aaPredicted RBP16.26■□□□□ 0.19
RPGR-207ENST00000476559 NKX1-1Q15270 411 aaPredicted RBP16.25■□□□□ 0.19
RPGR-207ENST00000476559 DNAJC5Q9H3Z4 198 aa16.2■□□□□ 0.18
RPGR-207ENST00000476559 PPP1R37O75864 691 aa16.19■□□□□ 0.18
RPGR-207ENST00000476559 FAM163AQ96GL9 167 aaPredicted RBP16.18■□□□□ 0.18
RPGR-207ENST00000476559 TMEM92Q6UXU6 159 aa16.11■□□□□ 0.17
RPGR-207ENST00000476559 LCE2DQ5TA82 110 aaPredicted RBP16.05■□□□□ 0.16
RPGR-207ENST00000476559 RYDENQ9NUL5 291 aaKnown RBP16.05■□□□□ 0.16
RPGR-207ENST00000476559 SNPHO15079 494 aa16.04■□□□□ 0.16
RPGR-207ENST00000476559 GTPBP6O43824 516 aaPredicted RBP16.04■□□□□ 0.16
RPGR-207ENST00000476559 ST18O60284 1047 aa16■□□□□ 0.15
RPGR-207ENST00000476559 BBXQ8WY36 941 aaPredicted RBP15.99■□□□□ 0.15
RPGR-207ENST00000476559 C2orf72A6NCS6 295 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms