RNA–Protein interactions for RNA: ENST00000476539.5

SUPT20H-214, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 528 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-214ENST00000476539 PRR29P0C7W0 189 aa9.2□□□□□ -0.94
SUPT20H-214ENST00000476539 DNAJC5Q9H3Z4 198 aa9.2□□□□□ -0.94
SUPT20H-214ENST00000476539 DCAF8Q5TAQ9 597 aa9.19□□□□□ -0.94
SUPT20H-214ENST00000476539 RNF25Q96BH1 459 aaPredicted RBP9.19□□□□□ -0.94
SUPT20H-214ENST00000476539 CLEC11AQ9Y240 323 aa9.19□□□□□ -0.94
SUPT20H-214ENST00000476539 RIOK3O14730 519 aaKnown RBP9.18□□□□□ -0.94
SUPT20H-214ENST00000476539 TSHZ2Q9NRE2 1034 aa9.18□□□□□ -0.94
SUPT20H-214ENST00000476539 CREBZFQ9NS37 354 aa9.17□□□□□ -0.94
SUPT20H-214ENST00000476539 REM2Q8IYK8 340 aaPredicted RBP9.15□□□□□ -0.94
SUPT20H-214ENST00000476539 VGFO15240 615 aaPredicted RBP9.13□□□□□ -0.95
SUPT20H-214ENST00000476539 MNX1P50219 401 aaPredicted RBP9.13□□□□□ -0.95
SUPT20H-214ENST00000476539 CHRM1P11229 460 aaPredicted RBP9.11□□□□□ -0.95
SUPT20H-214ENST00000476539 STK25O00506 426 aa9.09□□□□□ -0.95
SUPT20H-214ENST00000476539 RASEFQ8IZ41 740 aa9.07□□□□□ -0.96
SUPT20H-214ENST00000476539 RYDENQ9NUL5 291 aaKnown RBP9.07□□□□□ -0.96
SUPT20H-214ENST00000476539 SGIP1Q9BQI5 828 aa9.06□□□□□ -0.96
SUPT20H-214ENST00000476539 NBR1Q14596 966 aa9.05□□□□□ -0.96
SUPT20H-214ENST00000476539 NKX1-1Q15270 411 aaPredicted RBP9.05□□□□□ -0.96
SUPT20H-214ENST00000476539 PITPNM1O00562 1244 aa9.04□□□□□ -0.96
SUPT20H-214ENST00000476539 PRKCSHP14314 528 aaPredicted RBP9.04□□□□□ -0.96
SUPT20H-214ENST00000476539 GTPBP6O43824 516 aaPredicted RBP9.03□□□□□ -0.96
SUPT20H-214ENST00000476539 TPRNQ4KMQ1 711 aa9.02□□□□□ -0.97
SUPT20H-214ENST00000476539 BCL11BQ9C0K0 894 aaPredicted RBP9.01□□□□□ -0.97
SUPT20H-214ENST00000476539 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9□□□□□ -0.97
SUPT20H-214ENST00000476539 ZFP91Q96JP5 570 aaPredicted RBP9□□□□□ -0.97
SUPT20H-214ENST00000476539 STK24Q9Y6E0 443 aa9□□□□□ -0.97
SUPT20H-214ENST00000476539 PYGBP11216 843 aa8.99□□□□□ -0.97
SUPT20H-214ENST00000476539 ZNF467Q7Z7K2 595 aaPredicted RBP8.96□□□□□ -0.98
SUPT20H-214ENST00000476539 PDAP1Q13442 181 aaKnown RBP8.9□□□□□ -0.98
SUPT20H-214ENST00000476539 TSPYL2Q9H2G4 693 aaPredicted RBP8.9□□□□□ -0.98
SUPT20H-214ENST00000476539 FARP1Q9Y4F1 1045 aaPredicted RBP8.9□□□□□ -0.98
SUPT20H-214ENST00000476539 CHADLQ6NUI6 762 aa8.89□□□□□ -0.99
SUPT20H-214ENST00000476539 P3H3Q8IVL6 736 aa8.88□□□□□ -0.99
SUPT20H-214ENST00000476539 PAK3O75914 559 aaPredicted RBP8.84□□□□□ -0.99
SUPT20H-214ENST00000476539 ZNF579Q8NAF0 562 aaKnown RBP8.84□□□□□ -0.99
SUPT20H-214ENST00000476539 PRKAR2AP13861 404 aaKnown RBP8.83□□□□□ -1
SUPT20H-214ENST00000476539 CCDC61Q9Y6R9 512 aa8.82□□□□□ -1
SUPT20H-214ENST00000476539 PCDHB8Q9UN66 801 aa8.81□□□□□ -1
SUPT20H-214ENST00000476539 PCDHB13Q9Y5F0 798 aa8.81□□□□□ -1
SUPT20H-214ENST00000476539 PSEN1P49768 467 aa8.8□□□□□ -1
SUPT20H-214ENST00000476539 WDR70Q9NW82 654 aa8.79□□□□□ -1
SUPT20H-214ENST00000476539 FXR2P51116 673 aaKnown RBP eCLIP8.77□□□□□ -1.01
SUPT20H-214ENST00000476539 MFRPQ9BY79 579 aa8.75□□□□□ -1.01
SUPT20H-214ENST00000476539 NLRP6P59044 892 aa8.72□□□□□ -1.01
SUPT20H-214ENST00000476539 CADPS2Q86UW7 1296 aa8.72□□□□□ -1.01
SUPT20H-214ENST00000476539 IFNL1Q8IU54 200 aa8.72□□□□□ -1.01
SUPT20H-214ENST00000476539 KCNV2Q8TDN2 545 aa8.71□□□□□ -1.02
SUPT20H-214ENST00000476539 SOX12O15370 315 aa8.7□□□□□ -1.02
SUPT20H-214ENST00000476539 CHRDL2Q6WN34 429 aa8.7□□□□□ -1.02
SUPT20H-214ENST00000476539 KIF12Q96FN5 646 aa8.7□□□□□ -1.02
SUPT20H-214ENST00000476539 MAP3K13O43283 966 aa8.69□□□□□ -1.02
SUPT20H-214ENST00000476539 CABP2Q9NPB3 220 aa8.69□□□□□ -1.02
SUPT20H-214ENST00000476539 TULP1O00294 542 aaPredicted RBP8.68□□□□□ -1.02
SUPT20H-214ENST00000476539 EFCAB3Q8N7B9 438 aa8.68□□□□□ -1.02
SUPT20H-214ENST00000476539 PIP4P2Q8N4L2 257 aa8.67□□□□□ -1.02
SUPT20H-214ENST00000476539 FBXO22Q8NEZ5 403 aa8.67□□□□□ -1.02
SUPT20H-214ENST00000476539 POTEHQ6S545 545 aa8.66□□□□□ -1.02
SUPT20H-214ENST00000476539 ARHGEF1Q92888 912 aaKnown RBP8.64□□□□□ -1.03
SUPT20H-214ENST00000476539 LMOD2Q6P5Q4 547 aa8.63□□□□□ -1.03
SUPT20H-214ENST00000476539 ZRANB1Q9UGI0 708 aa8.63□□□□□ -1.03
SUPT20H-214ENST00000476539 PHF8Q9UPP1 1060 aa8.63□□□□□ -1.03
SUPT20H-214ENST00000476539 PPP1R37O75864 691 aa8.62□□□□□ -1.03
SUPT20H-214ENST00000476539 CD44P16070 742 aaKnown RBP8.62□□□□□ -1.03
SUPT20H-214ENST00000476539 GOLGA2Q08379 1002 aa8.61□□□□□ -1.03
SUPT20H-214ENST00000476539 E2F4Q16254 413 aa8.61□□□□□ -1.03
SUPT20H-214ENST00000476539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.6□□□□□ -1.03
SUPT20H-214ENST00000476539 PHF12Q96QT6 1004 aa8.57□□□□□ -1.04
SUPT20H-214ENST00000476539 PDE4AP27815 886 aa8.55□□□□□ -1.04
SUPT20H-214ENST00000476539 TMEM106CQ9BVX2 250 aa8.55□□□□□ -1.04
SUPT20H-214ENST00000476539 MFSD10Q14728 455 aa8.54□□□□□ -1.04
SUPT20H-214ENST00000476539 MS4A4AQ96JQ5 239 aa8.54□□□□□ -1.04
SUPT20H-214ENST00000476539 NCKAP5LQ9HCH0 1330 aa8.54□□□□□ -1.04
SUPT20H-214ENST00000476539 MKRN3Q13064 507 aaKnown RBP8.53□□□□□ -1.04
SUPT20H-214ENST00000476539 LARP6Q9BRS8 491 aaKnown RBP8.53□□□□□ -1.04
SUPT20H-214ENST00000476539 CRISPLD2Q9H0B8 497 aa8.53□□□□□ -1.04
SUPT20H-214ENST00000476539 TESPA1A2RU30 521 aaPredicted RBP8.52□□□□□ -1.05
SUPT20H-214ENST00000476539 TMEM132AQ24JP5 1023 aa8.52□□□□□ -1.05
SUPT20H-214ENST00000476539 DDX27Q96GQ7 796 aaKnown RBP8.52□□□□□ -1.05
SUPT20H-214ENST00000476539 SMYD5Q6GMV2 418 aa8.51□□□□□ -1.05
SUPT20H-214ENST00000476539 MS4A3Q96HJ5 214 aa8.51□□□□□ -1.05
SUPT20H-214ENST00000476539 ARIH1Q9Y4X5 557 aaPredicted RBP8.51□□□□□ -1.05
SUPT20H-214ENST00000476539 SEMA3EO15041 775 aa8.49□□□□□ -1.05
SUPT20H-214ENST00000476539 TIE1P35590 1138 aa8.49□□□□□ -1.05
SUPT20H-214ENST00000476539 ERICH6Q7L0X2 663 aa8.49□□□□□ -1.05
SUPT20H-214ENST00000476539 ZC3H15Q8WU90 426 aaKnown RBP8.47□□□□□ -1.05
SUPT20H-214ENST00000476539 C19orf67A6NJJ6 358 aa8.46□□□□□ -1.06
SUPT20H-214ENST00000476539 CAMK2BQ13554 666 aa8.46□□□□□ -1.06
SUPT20H-214ENST00000476539 GTF3C3Q9Y5Q9 886 aa8.46□□□□□ -1.06
SUPT20H-214ENST00000476539 TTLL13PA6NNM8 815 aa8.44□□□□□ -1.06
SUPT20H-214ENST00000476539 ILDR1Q86SU0 546 aaPredicted RBP8.44□□□□□ -1.06
SUPT20H-214ENST00000476539 TRPC6Q9Y210 931 aa8.44□□□□□ -1.06
SUPT20H-214ENST00000476539 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.43□□□□□ -1.061e-10■■□□□ 12.2
SUPT20H-214ENST00000476539 BRPF1P55201 1214 aaPredicted RBP8.41□□□□□ -1.06
SUPT20H-214ENST00000476539 PPP1R15BQ5SWA1 713 aa8.41□□□□□ -1.06
SUPT20H-214ENST00000476539 CLCN6P51797 869 aa8.4□□□□□ -1.06
SUPT20H-214ENST00000476539 GPHNQ9NQX3 736 aaPredicted RBP8.4□□□□□ -1.06
SUPT20H-214ENST00000476539 BMP2KQ9NSY1 1161 aaPredicted RBP8.4□□□□□ -1.06
SUPT20H-214ENST00000476539 TIMELESSQ9UNS1 1208 aa8.39□□□□□ -1.07
SUPT20H-214ENST00000476539 TRIM35Q9UPQ4 493 aa8.38□□□□□ -1.07
SUPT20H-214ENST00000476539 ZMYND10O75800 440 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms