RNA–Protein interactions for RNA: ENST00000476074.5

PCDH15-222, Transcript of protocadherin related 15, human

TSL 3

Gene PCDH15, Length 754 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-222	ENST00000476074	PLCB2	Q00722	1185 aa		11.05	□□□□□ -0.64
PCDH15-222	ENST00000476074	CREBZF	Q9NS37	354 aa		11.02	□□□□□ -0.65
PCDH15-222	ENST00000476074	ZNF579	Q8NAF0	562 aa	Known RBP	11	□□□□□ -0.65
PCDH15-222	ENST00000476074	TRIM41	Q8WV44	630 aa		10.96	□□□□□ -0.65
PCDH15-222	ENST00000476074	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.95	□□□□□ -0.66
PCDH15-222	ENST00000476074	RGL2	O15211	777 aa		10.92	□□□□□ -0.66
PCDH15-222	ENST00000476074	BBX	Q8WY36	941 aa	Predicted RBP	10.91	□□□□□ -0.66
PCDH15-222	ENST00000476074	GSE1	Q14687	1217 aa		10.9	□□□□□ -0.66
PCDH15-222	ENST00000476074	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.89	□□□□□ -0.67
PCDH15-222	ENST00000476074	ZRANB1	Q9UGI0	708 aa		10.88	□□□□□ -0.67
PCDH15-222	ENST00000476074	NUBP1	P53384	320 aa		10.87	□□□□□ -0.67
PCDH15-222	ENST00000476074	MNX1	P50219	401 aa	Predicted RBP	10.86	□□□□□ -0.67
PCDH15-222	ENST00000476074	NPM1	P06748	294 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
PCDH15-222	ENST00000476074	HAP1	P54257	671 aa	Predicted RBP	10.84	□□□□□ -0.67
PCDH15-222	ENST00000476074	DCBLD2	Q96PD2	775 aa		10.84	□□□□□ -0.67
PCDH15-222	ENST00000476074	GALR2	O43603	387 aa	Predicted RBP	10.82	□□□□□ -0.68
PCDH15-222	ENST00000476074	DCAF8	Q5TAQ9	597 aa		10.79	□□□□□ -0.68
PCDH15-222	ENST00000476074	FAM212A	Q96EL1	285 aa		10.79	□□□□□ -0.68
PCDH15-222	ENST00000476074	CHGA	P10645	457 aa	Known RBP	10.77	□□□□□ -0.69
PCDH15-222	ENST00000476074	VSIG10	Q8N0Z9	540 aa		10.77	□□□□□ -0.69
PCDH15-222	ENST00000476074	TAOK2	Q9UL54	1235 aa		10.76	□□□□□ -0.69
PCDH15-222	ENST00000476074	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.75	□□□□□ -0.69
PCDH15-222	ENST00000476074	HS6ST3	Q8IZP7	471 aa		10.74	□□□□□ -0.69
PCDH15-222	ENST00000476074	PHF12	Q96QT6	1004 aa		10.74	□□□□□ -0.69
PCDH15-222	ENST00000476074	PAK3	O75914	559 aa	Predicted RBP	10.73	□□□□□ -0.69
PCDH15-222	ENST00000476074	CHRM1	P11229	460 aa	Predicted RBP	10.73	□□□□□ -0.69
PCDH15-222	ENST00000476074	SPRYD3	Q8NCJ5	442 aa		10.73	□□□□□ -0.69
PCDH15-222	ENST00000476074	RNF25	Q96BH1	459 aa	Predicted RBP	10.73	□□□□□ -0.69
PCDH15-222	ENST00000476074	RIOK3	O14730	519 aa	Known RBP	10.71	□□□□□ -0.69
PCDH15-222	ENST00000476074	CFAP44	Q96MT7	982 aa		10.71	□□□□□ -0.69
PCDH15-222	ENST00000476074	DNAJC5	Q9H3Z4	198 aa		10.71	□□□□□ -0.69
PCDH15-222	ENST00000476074	RASEF	Q8IZ41	740 aa		10.7	□□□□□ -0.7
PCDH15-222	ENST00000476074	POTEB2	H3BUK9	544 aa		10.69	□□□□□ -0.7
PCDH15-222	ENST00000476074	OTUD5	Q96G74	571 aa		10.68	□□□□□ -0.7
PCDH15-222	ENST00000476074	PELP1	Q8IZL8	1130 aa	Known RBP	10.66	□□□□□ -0.7
PCDH15-222	ENST00000476074	VGF	O15240	615 aa	Predicted RBP	10.65	□□□□□ -0.7
PCDH15-222	ENST00000476074	ASTL	Q6HA08	431 aa	Predicted RBP	10.65	□□□□□ -0.7
PCDH15-222	ENST00000476074	SGIP1	Q9BQI5	828 aa		10.62	□□□□□ -0.71
PCDH15-222	ENST00000476074	MS4A3	Q96HJ5	214 aa		10.61	□□□□□ -0.71
PCDH15-222	ENST00000476074	ATMIN	O43313	823 aa	Predicted RBP	10.59	□□□□□ -0.71
PCDH15-222	ENST00000476074	KDM2A	Q9Y2K7	1162 aa		10.59	□□□□□ -0.71
PCDH15-222	ENST00000476074	BCAN	Q96GW7	911 aa		10.58	□□□□□ -0.72
PCDH15-222	ENST00000476074	CCDC61	Q9Y6R9	512 aa		10.58	□□□□□ -0.72
PCDH15-222	ENST00000476074	STK25	O00506	426 aa		10.57	□□□□□ -0.72
PCDH15-222	ENST00000476074	PYGB	P11216	843 aa		10.57	□□□□□ -0.72
PCDH15-222	ENST00000476074	TSHZ2	Q9NRE2	1034 aa		10.56	□□□□□ -0.72
PCDH15-222	ENST00000476074	C7	P10643	843 aa		10.54	□□□□□ -0.72
PCDH15-222	ENST00000476074	SLC39A7	Q92504	469 aa		10.54	□□□□□ -0.72
PCDH15-222	ENST00000476074	POTEJ	P0CG39	1038 aa		10.53	□□□□□ -0.72
PCDH15-222	ENST00000476074	NKX1-1	Q15270	411 aa	Predicted RBP	10.53	□□□□□ -0.72
PCDH15-222	ENST00000476074	METRN	Q9UJH8	293 aa		10.53	□□□□□ -0.72
PCDH15-222	ENST00000476074	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.52	□□□□□ -0.73
PCDH15-222	ENST00000476074	ZFP91	Q96JP5	570 aa	Predicted RBP	10.52	□□□□□ -0.73
PCDH15-222	ENST00000476074	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.51	□□□□□ -0.73
PCDH15-222	ENST00000476074	KIF12	Q96FN5	646 aa		10.51	□□□□□ -0.73
PCDH15-222	ENST00000476074	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.51	□□□□□ -0.73
PCDH15-222	ENST00000476074	GTPBP6	O43824	516 aa	Predicted RBP	10.5	□□□□□ -0.73
PCDH15-222	ENST00000476074	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.5	□□□□□ -0.73
PCDH15-222	ENST00000476074	RYDEN	Q9NUL5	291 aa	Known RBP	10.5	□□□□□ -0.73
PCDH15-222	ENST00000476074	STK24	Q9Y6E0	443 aa		10.49	□□□□□ -0.73
PCDH15-222	ENST00000476074	ATN1	P54259	1190 aa	Predicted RBP	10.46	□□□□□ -0.73
PCDH15-222	ENST00000476074	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.44	□□□□□ -0.74
PCDH15-222	ENST00000476074	POTEF	A5A3E0	1075 aa		10.43	□□□□□ -0.74
PCDH15-222	ENST00000476074	PDAP1	Q13442	181 aa	Known RBP	10.43	□□□□□ -0.74
PCDH15-222	ENST00000476074	POTEM	A6NI47	508 aa		10.42	□□□□□ -0.74
PCDH15-222	ENST00000476074	MAMSTR	Q6ZN01	415 aa		10.42	□□□□□ -0.74
PCDH15-222	ENST00000476074	TIE1	P35590	1138 aa		10.41	□□□□□ -0.74
PCDH15-222	ENST00000476074	TRPC6	Q9Y210	931 aa		10.41	□□□□□ -0.74
PCDH15-222	ENST00000476074	MAP3K13	O43283	966 aa		10.4	□□□□□ -0.74
PCDH15-222	ENST00000476074	POTEG	Q6S5H5	508 aa		10.39	□□□□□ -0.75
PCDH15-222	ENST00000476074	PLSCR2	Q9NRY7	297 aa		10.39	□□□□□ -0.75
PCDH15-222	ENST00000476074	LCE2D	Q5TA82	110 aa	Predicted RBP	10.38	□□□□□ -0.75
PCDH15-222	ENST00000476074	PCDHB8	Q9UN66	801 aa		10.37	□□□□□ -0.75
PCDH15-222	ENST00000476074	PCDHB13	Q9Y5F0	798 aa		10.37	□□□□□ -0.75
PCDH15-222	ENST00000476074	PSEN1	P49768	467 aa		10.36	□□□□□ -0.75
PCDH15-222	ENST00000476074	PCDH10	Q9P2E7	1040 aa		10.35	□□□□□ -0.75
PCDH15-222	ENST00000476074	TTLL13P	A6NNM8	815 aa		10.33	□□□□□ -0.76
PCDH15-222	ENST00000476074	SCUBE2	Q9NQ36	999 aa		10.32	□□□□□ -0.76
PCDH15-222	ENST00000476074	IFNL1	Q8IU54	200 aa		10.3	□□□□□ -0.76
PCDH15-222	ENST00000476074	IER5L	Q5T953	404 aa		10.28	□□□□□ -0.76
PCDH15-222	ENST00000476074	COLQ	Q9Y215	455 aa	Predicted RBP	10.28	□□□□□ -0.76
PCDH15-222	ENST00000476074	NBR1	Q14596	966 aa		10.27	□□□□□ -0.77
PCDH15-222	ENST00000476074	MFRP	Q9BY79	579 aa		10.25	□□□□□ -0.77
PCDH15-222	ENST00000476074	SOX12	O15370	315 aa		10.22	□□□□□ -0.77
PCDH15-222	ENST00000476074	TRIM35	Q9UPQ4	493 aa		10.22	□□□□□ -0.77
PCDH15-222	ENST00000476074	NLRP6	P59044	892 aa		10.2	□□□□□ -0.78
PCDH15-222	ENST00000476074	PRKCSH	P14314	528 aa	Predicted RBP	10.19	□□□□□ -0.78
PCDH15-222	ENST00000476074	EFCAB3	Q8N7B9	438 aa		10.19	□□□□□ -0.78
PCDH15-222	ENST00000476074	FAM163A	Q96GL9	167 aa	Predicted RBP	10.19	□□□□□ -0.78
PCDH15-222	ENST00000476074	CABP2	Q9NPB3	220 aa		10.19	□□□□□ -0.78
PCDH15-222	ENST00000476074	SEC24B	O95487	1268 aa		10.18	□□□□□ -0.78
PCDH15-222	ENST00000476074	P3H3	Q8IVL6	736 aa		10.18	□□□□□ -0.78
PCDH15-222	ENST00000476074	FBXO22	Q8NEZ5	403 aa		10.18	□□□□□ -0.78
PCDH15-222	ENST00000476074	TPRN	Q4KMQ1	711 aa		10.17	□□□□□ -0.78
PCDH15-222	ENST00000476074	CADPS2	Q86UW7	1296 aa		10.15	□□□□□ -0.78
PCDH15-222	ENST00000476074	WDR70	Q9NW82	654 aa		10.15	□□□□□ -0.78
PCDH15-222	ENST00000476074	IRX5	P78411	483 aa	Predicted RBP	10.14	□□□□□ -0.79
PCDH15-222	ENST00000476074	PHF8	Q9UPP1	1060 aa		10.13	□□□□□ -0.79
PCDH15-222	ENST00000476074	TMEM106C	Q9BVX2	250 aa		10.12	□□□□□ -0.79
PCDH15-222	ENST00000476074	PPP1R37	O75864	691 aa		10.11	□□□□□ -0.79

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