RNA–Protein interactions for RNA: ENST00000475990.5

CBWD1-213, Transcript of COBW domain containing 1, humanhuman

TSL 3

Gene CBWD1, Length 2,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-213ENST00000475990 KCTD17Q8N5Z5 321 aa8.15□□□□□ -1.1
CBWD1-213ENST00000475990 RAD21O60216 631 aa8.15□□□□□ -1.1
CBWD1-213ENST00000475990 NEUROD2Q15784 382 aa8.14□□□□□ -1.11
CBWD1-213ENST00000475990 POTEHQ6S545 545 aa8.13□□□□□ -1.11
CBWD1-213ENST00000475990 ZNF428Q96B54 188 aa8.13□□□□□ -1.11
CBWD1-213ENST00000475990 ARID3CA6NKF2 412 aa8.12□□□□□ -1.11
CBWD1-213ENST00000475990 RGS22Q8NE09 1264 aa8.11□□□□□ -1.11
CBWD1-213ENST00000475990 NEFLP07196 543 aa8.11□□□□□ -1.11
CBWD1-213ENST00000475990 ECM2O94769 699 aaPredicted RBP8.1□□□□□ -1.11
CBWD1-213ENST00000475990 MTMR7Q9Y216 660 aa8.09□□□□□ -1.11
CBWD1-213ENST00000475990 RBM25P49756 843 aaKnown RBP8.07□□□□□ -1.12
CBWD1-213ENST00000475990 DNAJC5BQ9UF47 199 aa8.07□□□□□ -1.12
CBWD1-213ENST00000475990 APBB1O00213 710 aa8.05□□□□□ -1.12
CBWD1-213ENST00000475990 RGL2O15211 777 aa8.05□□□□□ -1.12
CBWD1-213ENST00000475990 FOXD4L5Q5VV16 416 aaPredicted RBP8.05□□□□□ -1.12
CBWD1-213ENST00000475990 FOXD4L4Q8WXT5 416 aaPredicted RBP8.05□□□□□ -1.12
CBWD1-213ENST00000475990 LMOD2Q6P5Q4 547 aa8.03□□□□□ -1.12
CBWD1-213ENST00000475990 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8□□□□□ -1.13
CBWD1-213ENST00000475990 BCL11BQ9C0K0 894 aaPredicted RBP8□□□□□ -1.13
CBWD1-213ENST00000475990 CHGAP10645 457 aaKnown RBP8□□□□□ -1.13
CBWD1-213ENST00000475990 USP35Q9P2H5 1018 aa7.99□□□□□ -1.13
CBWD1-213ENST00000475990 BCCIPQ9P287 314 aaKnown RBP eCLIP7.99□□□□□ -1.13
CBWD1-213ENST00000475990 SLC4A2P04920 1241 aa7.98□□□□□ -1.13
CBWD1-213ENST00000475990 ZNF692Q9BU19 519 aaPredicted RBP7.98□□□□□ -1.13
CBWD1-213ENST00000475990 AEBP1Q8IUX7 1158 aa7.96□□□□□ -1.13
CBWD1-213ENST00000475990 FAM177A1Q8N128 213 aaPredicted RBP7.96□□□□□ -1.13
CBWD1-213ENST00000475990 TMCO4Q5TGY1 634 aa7.95□□□□□ -1.14
CBWD1-213ENST00000475990 PKNOX2Q96KN3 472 aa7.95□□□□□ -1.14
CBWD1-213ENST00000475990 SLC24A3Q9HC58 644 aa7.95□□□□□ -1.14
CBWD1-213ENST00000475990 MFAP1P55081 439 aaKnown RBP7.94□□□□□ -1.14
CBWD1-213ENST00000475990 MYCNP04198 464 aaPredicted RBP7.93□□□□□ -1.14
CBWD1-213ENST00000475990 MAPK8IP2Q13387 824 aaPredicted RBP7.92□□□□□ -1.14
CBWD1-213ENST00000475990 CCDC82Q8N4S0 544 aa7.91□□□□□ -1.14
CBWD1-213ENST00000475990 CWC22Q9HCG8 908 aaKnown RBP7.91□□□□□ -1.14
CBWD1-213ENST00000475990 E9PSI1 815 aa7.91□□□□□ -1.14
CBWD1-213ENST00000475990 BRPF3Q9ULD4 1205 aa7.91□□□□□ -1.14
CBWD1-213ENST00000475990 ZNF592Q92610 1267 aa7.9□□□□□ -1.14
CBWD1-213ENST00000475990 ZFP91Q96JP5 570 aaPredicted RBP7.9□□□□□ -1.15
CBWD1-213ENST00000475990 TRAIPQ9BWF2 469 aa7.9□□□□□ -1.15
CBWD1-213ENST00000475990 IRX6P78412 446 aaPredicted RBP7.89□□□□□ -1.15
CBWD1-213ENST00000475990 FGD1P98174 961 aa7.89□□□□□ -1.15
CBWD1-213ENST00000475990 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.89□□□□□ -1.15
CBWD1-213ENST00000475990 TICAM2Q86XR7 235 aa7.88□□□□□ -1.15
CBWD1-213ENST00000475990 PPM1GO15355 546 aaPredicted RBP7.88□□□□□ -1.15
CBWD1-213ENST00000475990 GZF1Q9H116 711 aaPredicted RBP7.88□□□□□ -1.15
CBWD1-213ENST00000475990 CERS3Q8IU89 383 aa7.87□□□□□ -1.15
CBWD1-213ENST00000475990 ZC3H15Q8WU90 426 aaKnown RBP7.87□□□□□ -1.15
CBWD1-213ENST00000475990 RSPH4AQ5TD94 716 aa7.86□□□□□ -1.15
CBWD1-213ENST00000475990 PSMD1Q99460 953 aa7.85□□□□□ -1.15
CBWD1-213ENST00000475990 MKRN3Q13064 507 aaKnown RBP7.84□□□□□ -1.15
CBWD1-213ENST00000475990 SPDYE4A6NLX3 237 aa7.83□□□□□ -1.16
CBWD1-213ENST00000475990 CLSTN1O94985 981 aa7.83□□□□□ -1.16
CBWD1-213ENST00000475990 PROM2Q8N271 834 aa7.83□□□□□ -1.16
CBWD1-213ENST00000475990 ATF5Q9Y2D1 282 aaPredicted RBP7.83□□□□□ -1.16
CBWD1-213ENST00000475990 ARID4BQ4LE39 1312 aaPredicted RBP7.83□□□□□ -1.16
CBWD1-213ENST00000475990 CCDC136Q96JN2 1154 aa7.83□□□□□ -1.16
CBWD1-213ENST00000475990 TMED8Q6PL24 325 aaPredicted RBP7.82□□□□□ -1.16
CBWD1-213ENST00000475990 IL27Q8NEV9 243 aa7.82□□□□□ -1.16
CBWD1-213ENST00000475990 SPOCK2Q92563 424 aa7.82□□□□□ -1.16
CBWD1-213ENST00000475990 ZNF326Q5BKZ1 582 aaKnown RBP7.81□□□□□ -1.16
CBWD1-213ENST00000475990 A0A0U1RQG5 324 aaPredicted RBP7.78□□□□□ -1.16
CBWD1-213ENST00000475990 GPBP1L1Q9HC44 474 aaPredicted RBP7.78□□□□□ -1.16
CBWD1-213ENST00000475990 WDR70Q9NW82 654 aa7.78□□□□□ -1.16
CBWD1-213ENST00000475990 CC2D2BQ6DHV5 1058 aa7.78□□□□□ -1.16
CBWD1-213ENST00000475990 P3H3Q8IVL6 736 aa7.77□□□□□ -1.17
CBWD1-213ENST00000475990 NKX1-1Q15270 411 aaPredicted RBP7.75□□□□□ -1.17
CBWD1-213ENST00000475990 HS6ST3Q8IZP7 471 aa7.75□□□□□ -1.17
CBWD1-213ENST00000475990 CCDC125Q86Z20 511 aa7.75□□□□□ -1.17
CBWD1-213ENST00000475990 ZNF526Q8TF50 670 aaPredicted RBP7.75□□□□□ -1.17
CBWD1-213ENST00000475990 ZNF316A6NFI3 1004 aaPredicted RBP7.74□□□□□ -1.17
CBWD1-213ENST00000475990 KCNV2Q8TDN2 545 aa7.74□□□□□ -1.17
CBWD1-213ENST00000475990 GTPBP6O43824 516 aaPredicted RBP7.73□□□□□ -1.17
CBWD1-213ENST00000475990 FBXW7Q969H0 707 aa7.73□□□□□ -1.17
CBWD1-213ENST00000475990 PRDM16Q9HAZ2 1276 aa7.73□□□□□ -1.17
CBWD1-213ENST00000475990 CCDC27Q2M243 656 aa7.73□□□□□ -1.17
CBWD1-213ENST00000475990 ZEB1P37275 1124 aaPredicted RBP7.72□□□□□ -1.17
CBWD1-213ENST00000475990 KDM4AO75164 1064 aa7.71□□□□□ -1.18
CBWD1-213ENST00000475990 IRF5Q13568 498 aa7.71□□□□□ -1.18
CBWD1-213ENST00000475990 NAP1L5Q96NT1 182 aaPredicted RBP7.7□□□□□ -1.18
CBWD1-213ENST00000475990 RETREG2Q8NC44 543 aa7.7□□□□□ -1.18
CBWD1-213ENST00000475990 CLUAP1Q96AJ1 413 aa7.69□□□□□ -1.18
CBWD1-213ENST00000475990 TRAK2O60296 914 aa7.69□□□□□ -1.18
CBWD1-213ENST00000475990 SCAF1Q9H7N4 1312 aaKnown RBP7.67□□□□□ -1.18
CBWD1-213ENST00000475990 BARGINQ6ZT62 677 aa7.67□□□□□ -1.18
CBWD1-213ENST00000475990 ZMYND10O75800 440 aa7.66□□□□□ -1.18
CBWD1-213ENST00000475990 RNF216Q9NWF9 866 aaPredicted RBP7.66□□□□□ -1.18
CBWD1-213ENST00000475990 PLSCR2Q9NRY7 297 aa7.66□□□□□ -1.18
CBWD1-213ENST00000475990 CADPSQ9ULU8 1353 aa7.65□□□□□ -1.19
CBWD1-213ENST00000475990 KDM4CQ9H3R0 1056 aa7.64□□□□□ -1.19
CBWD1-213ENST00000475990 TEX2Q8IWB9 1127 aa7.63□□□□□ -1.19
CBWD1-213ENST00000475990 FLIIQ13045 1269 aa7.63□□□□□ -1.19
CBWD1-213ENST00000475990 SMARCA5O60264 1052 aaPredicted RBP7.62□□□□□ -1.19
CBWD1-213ENST00000475990 NCLP19338 710 aaKnown RBP7.62□□□□□ -1.19
CBWD1-213ENST00000475990 PRDM10Q9NQV6 1147 aa7.62□□□□□ -1.19
CBWD1-213ENST00000475990 A6NJR5 290 aa7.61□□□□□ -1.19
CBWD1-213ENST00000475990 ZNF777Q9ULD5 760 aaPredicted RBP7.61□□□□□ -1.19
CBWD1-213ENST00000475990 AMOTL2Q9Y2J4 779 aa7.6□□□□□ -1.19
CBWD1-213ENST00000475990 MYT1LQ9UL68 1186 aa7.6□□□□□ -1.19
CBWD1-213ENST00000475990 AAMPQ13685 434 aa7.59□□□□□ -1.19
CBWD1-213ENST00000475990 CACNB1Q02641 598 aaPredicted RBP7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms