RNA–Protein interactions for RNA: ENST00000475916.1

SLF1-204, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-204ENST00000475916 PRR29P0C7W0 189 aa12.94□□□□□ -0.34
SLF1-204ENST00000475916 AKT1S1Q96B36 256 aa12.94□□□□□ -0.34
SLF1-204ENST00000475916 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
SLF1-204ENST00000475916 RIOK3O14730 519 aaKnown RBP12.92□□□□□ -0.34
SLF1-204ENST00000475916 PRKCSHP14314 528 aaPredicted RBP12.91□□□□□ -0.34
SLF1-204ENST00000475916 NUBP1P53384 320 aa12.91□□□□□ -0.34
SLF1-204ENST00000475916 NBR1Q14596 966 aa12.88□□□□□ -0.35
SLF1-204ENST00000475916 TPRNQ4KMQ1 711 aa12.88□□□□□ -0.35
SLF1-204ENST00000475916 DNAJC5Q9H3Z4 198 aa12.87□□□□□ -0.35
SLF1-204ENST00000475916 VGFO15240 615 aaPredicted RBP12.84□□□□□ -0.35
SLF1-204ENST00000475916 RNF25Q96BH1 459 aaPredicted RBP12.83□□□□□ -0.36
SLF1-204ENST00000475916 STK25O00506 426 aa12.82□□□□□ -0.36
SLF1-204ENST00000475916 RYDENQ9NUL5 291 aaKnown RBP12.82□□□□□ -0.36
SLF1-204ENST00000475916 CREBZFQ9NS37 354 aa12.8□□□□□ -0.36
SLF1-204ENST00000475916 CHRM1P11229 460 aaPredicted RBP12.78□□□□□ -0.36
SLF1-204ENST00000475916 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
SLF1-204ENST00000475916 STK24Q9Y6E0 443 aa12.71□□□□□ -0.37
SLF1-204ENST00000475916 GTPBP6O43824 516 aaPredicted RBP12.7□□□□□ -0.38
SLF1-204ENST00000475916 MNX1P50219 401 aaPredicted RBP12.7□□□□□ -0.38
SLF1-204ENST00000475916 SGIP1Q9BQI5 828 aa12.7□□□□□ -0.38
SLF1-204ENST00000475916 NKX1-1Q15270 411 aaPredicted RBP12.69□□□□□ -0.38
SLF1-204ENST00000475916 RASEFQ8IZ41 740 aa12.69□□□□□ -0.38
SLF1-204ENST00000475916 BCL11BQ9C0K0 894 aaPredicted RBP12.67□□□□□ -0.38
SLF1-204ENST00000475916 PYGBP11216 843 aa12.65□□□□□ -0.38
SLF1-204ENST00000475916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.64□□□□□ -0.39
SLF1-204ENST00000475916 ZFP91Q96JP5 570 aaPredicted RBP12.64□□□□□ -0.39
SLF1-204ENST00000475916 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
SLF1-204ENST00000475916 ZNF467Q7Z7K2 595 aaPredicted RBP12.58□□□□□ -0.4
SLF1-204ENST00000475916 P3H3Q8IVL6 736 aa12.54□□□□□ -0.4
SLF1-204ENST00000475916 WDR70Q9NW82 654 aa12.53□□□□□ -0.4
SLF1-204ENST00000475916 TSPYL2Q9H2G4 693 aaPredicted RBP12.52□□□□□ -0.41
SLF1-204ENST00000475916 PDAP1Q13442 181 aaKnown RBP12.49□□□□□ -0.41
SLF1-204ENST00000475916 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
SLF1-204ENST00000475916 FARP1Q9Y4F1 1045 aaPredicted RBP12.44□□□□□ -0.42
SLF1-204ENST00000475916 CHADLQ6NUI6 762 aa12.43□□□□□ -0.42
SLF1-204ENST00000475916 TULP1O00294 542 aaPredicted RBP12.38□□□□□ -0.43
SLF1-204ENST00000475916 PSEN1P49768 467 aa12.37□□□□□ -0.43
SLF1-204ENST00000475916 ZNF579Q8NAF0 562 aaKnown RBP12.37□□□□□ -0.43
SLF1-204ENST00000475916 PCDHB8Q9UN66 801 aa12.37□□□□□ -0.43
SLF1-204ENST00000475916 PCDHB13Q9Y5F0 798 aa12.37□□□□□ -0.43
SLF1-204ENST00000475916 PRKAR2AP13861 404 aaKnown RBP12.34□□□□□ -0.43
SLF1-204ENST00000475916 CCDC61Q9Y6R9 512 aa12.3□□□□□ -0.44
SLF1-204ENST00000475916 NLRP6P59044 892 aa12.28□□□□□ -0.44
SLF1-204ENST00000475916 SOX12O15370 315 aa12.26□□□□□ -0.45
SLF1-204ENST00000475916 CADPS2Q86UW7 1296 aa12.25□□□□□ -0.45
SLF1-204ENST00000475916 KCNV2Q8TDN2 545 aa12.25□□□□□ -0.45
SLF1-204ENST00000475916 MFRPQ9BY79 579 aa12.25□□□□□ -0.45
SLF1-204ENST00000475916 LMOD2Q6P5Q4 547 aa12.21□□□□□ -0.45
SLF1-204ENST00000475916 ERICH6Q7L0X2 663 aa12.21□□□□□ -0.45
SLF1-204ENST00000475916 CABP2Q9NPB3 220 aa12.21□□□□□ -0.45
SLF1-204ENST00000475916 FXR2P51116 673 aaKnown RBP eCLIP12.2□□□□□ -0.46
SLF1-204ENST00000475916 IFNL1Q8IU54 200 aa12.2□□□□□ -0.46
SLF1-204ENST00000475916 ARHGEF1Q92888 912 aaKnown RBP12.2□□□□□ -0.46
SLF1-204ENST00000475916 EFCAB3Q8N7B9 438 aa12.19□□□□□ -0.46
SLF1-204ENST00000475916 E2F4Q16254 413 aa12.18□□□□□ -0.46
SLF1-204ENST00000475916 MAP3K13O43283 966 aa12.17□□□□□ -0.46
SLF1-204ENST00000475916 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
SLF1-204ENST00000475916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.17□□□□□ -0.46
SLF1-204ENST00000475916 KIF12Q96FN5 646 aa12.16□□□□□ -0.46
SLF1-204ENST00000475916 TMEM132AQ24JP5 1023 aa12.14□□□□□ -0.47
SLF1-204ENST00000475916 GTF3C3Q9Y5Q9 886 aa12.14□□□□□ -0.47
SLF1-204ENST00000475916 PHF8Q9UPP1 1060 aa12.13□□□□□ -0.47
SLF1-204ENST00000475916 PPP1R37O75864 691 aa12.11□□□□□ -0.47
SLF1-204ENST00000475916 PDE4AP27815 886 aa12.11□□□□□ -0.47
SLF1-204ENST00000475916 FBXO22Q8NEZ5 403 aa12.11□□□□□ -0.47
SLF1-204ENST00000475916 SMYD5Q6GMV2 418 aa12.1□□□□□ -0.47
SLF1-204ENST00000475916 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
SLF1-204ENST00000475916 CHRDL2Q6WN34 429 aa12.08□□□□□ -0.48
SLF1-204ENST00000475916 LARP6Q9BRS8 491 aaKnown RBP12.05□□□□□ -0.48
SLF1-204ENST00000475916 CD44P16070 742 aaKnown RBP12.04□□□□□ -0.48
SLF1-204ENST00000475916 PIP4P2Q8N4L2 257 aa12.04□□□□□ -0.48
SLF1-204ENST00000475916 MKRN3Q13064 507 aaKnown RBP12.03□□□□□ -0.48
SLF1-204ENST00000475916 DDX27Q96GQ7 796 aaKnown RBP12□□□□□ -0.49
SLF1-204ENST00000475916 TMEM106CQ9BVX2 250 aa12□□□□□ -0.49
SLF1-204ENST00000475916 TESPA1A2RU30 521 aaPredicted RBP11.99□□□□□ -0.49
SLF1-204ENST00000475916 SEMA3EO15041 775 aa11.99□□□□□ -0.49
SLF1-204ENST00000475916 ZC3H15Q8WU90 426 aaKnown RBP11.98□□□□□ -0.49
SLF1-204ENST00000475916 PHF12Q96QT6 1004 aa11.96□□□□□ -0.49
SLF1-204ENST00000475916 TIMELESSQ9UNS1 1208 aa11.96□□□□□ -0.49
SLF1-204ENST00000475916 NCKAP5LQ9HCH0 1330 aa11.95□□□□□ -0.5
SLF1-204ENST00000475916 MFSD10Q14728 455 aa11.95□□□□□ -0.5
SLF1-204ENST00000475916 POTEHQ6S545 545 aa11.95□□□□□ -0.5
SLF1-204ENST00000475916 CRISPLD2Q9H0B8 497 aa11.92□□□□□ -0.5
SLF1-204ENST00000475916 NEUROD2Q15784 382 aa11.91□□□□□ -0.5
SLF1-204ENST00000475916 MS4A4AQ96JQ5 239 aa11.91□□□□□ -0.5
SLF1-204ENST00000475916 ARIH1Q9Y4X5 557 aaPredicted RBP11.91□□□□□ -0.5
SLF1-204ENST00000475916 BRPF1P55201 1214 aaPredicted RBP11.89□□□□□ -0.51
SLF1-204ENST00000475916 C14orf37Q86TY3 774 aa11.87□□□□□ -0.51
SLF1-204ENST00000475916 SLC24A3Q9HC58 644 aa11.87□□□□□ -0.51
SLF1-204ENST00000475916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.86□□□□□ -0.51
SLF1-204ENST00000475916 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
SLF1-204ENST00000475916 TIE1P35590 1138 aa11.85□□□□□ -0.51
SLF1-204ENST00000475916 CAMK2BQ13554 666 aa11.85□□□□□ -0.51
SLF1-204ENST00000475916 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
SLF1-204ENST00000475916 ZMYND10O75800 440 aa11.83□□□□□ -0.52
SLF1-204ENST00000475916 PPP1R15BQ5SWA1 713 aa11.82□□□□□ -0.52
SLF1-204ENST00000475916 GPHNQ9NQX3 736 aaPredicted RBP11.82□□□□□ -0.52
SLF1-204ENST00000475916 KRI1Q8N9T8 703 aaKnown RBP11.81□□□□□ -0.52
SLF1-204ENST00000475916 GPIHBP1Q8IV16 184 aa11.79□□□□□ -0.52
SLF1-204ENST00000475916 BARGINQ6ZT62 677 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms