RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 HS6ST3Q8IZP7 471 aa9.77□□□□□ -0.85
SRGAP3-205ENST00000475560 ZNF692Q9BU19 519 aaPredicted RBP9.74□□□□□ -0.85
SRGAP3-205ENST00000475560 TRIM41Q8WV44 630 aa9.73□□□□□ -0.85
SRGAP3-205ENST00000475560 HOMEZQ8IX15 550 aa9.69□□□□□ -0.86
SRGAP3-205ENST00000475560 REM2Q8IYK8 340 aaPredicted RBP9.69□□□□□ -0.86
SRGAP3-205ENST00000475560 ZBTB47Q9UFB7 747 aaPredicted RBP9.68□□□□□ -0.86
SRGAP3-205ENST00000475560 C14orf37Q86TY3 774 aa9.66□□□□□ -0.86
SRGAP3-205ENST00000475560 SPDYE2BA6NHP3 402 aa9.65□□□□□ -0.86
SRGAP3-205ENST00000475560 GTPBP6O43824 516 aaPredicted RBP9.65□□□□□ -0.86
SRGAP3-205ENST00000475560 PLEKHG5O94827 1062 aa9.65□□□□□ -0.86
SRGAP3-205ENST00000475560 SPDYE6P0CI01 402 aa9.65□□□□□ -0.86
SRGAP3-205ENST00000475560 NKX1-1Q15270 411 aaPredicted RBP9.65□□□□□ -0.86
SRGAP3-205ENST00000475560 SPDYE2Q495Y8 402 aa9.65□□□□□ -0.86
SRGAP3-205ENST00000475560 SSUH2Q9Y2M2 353 aa9.64□□□□□ -0.87
SRGAP3-205ENST00000475560 PABPN1Q86U42 306 aaKnown RBP eCLIP9.63□□□□□ -0.87
SRGAP3-205ENST00000475560 RNF25Q96BH1 459 aaPredicted RBP9.61□□□□□ -0.87
SRGAP3-205ENST00000475560 PITPNM1O00562 1244 aa9.58□□□□□ -0.88
SRGAP3-205ENST00000475560 GSE1Q14687 1217 aa9.58□□□□□ -0.88
SRGAP3-205ENST00000475560 PIP4P2Q8N4L2 257 aa9.55□□□□□ -0.88
SRGAP3-205ENST00000475560 RIOK3O14730 519 aaKnown RBP9.54□□□□□ -0.88
SRGAP3-205ENST00000475560 SP7Q8TDD2 431 aaPredicted RBP9.53□□□□□ -0.88
SRGAP3-205ENST00000475560 FXR2P51116 673 aaKnown RBP eCLIP9.52□□□□□ -0.89
SRGAP3-205ENST00000475560 STK25O00506 426 aa9.49□□□□□ -0.89
SRGAP3-205ENST00000475560 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.49□□□□□ -0.89
SRGAP3-205ENST00000475560 P3H3Q8IVL6 736 aa9.48□□□□□ -0.89
SRGAP3-205ENST00000475560 NUBP1P53384 320 aa9.47□□□□□ -0.89
SRGAP3-205ENST00000475560 DCAF8Q5TAQ9 597 aa9.47□□□□□ -0.89
SRGAP3-205ENST00000475560 VGFO15240 615 aaPredicted RBP9.46□□□□□ -0.9
SRGAP3-205ENST00000475560 LMOD2Q6P5Q4 547 aa9.46□□□□□ -0.9
SRGAP3-205ENST00000475560 SPDYE1Q8NFV5 336 aaPredicted RBP9.46□□□□□ -0.9
SRGAP3-205ENST00000475560 RYDENQ9NUL5 291 aaKnown RBP9.46□□□□□ -0.9
SRGAP3-205ENST00000475560 HAX1O00165 279 aa9.44□□□□□ -0.9
SRGAP3-205ENST00000475560 BRPF1P55201 1214 aaPredicted RBP9.44□□□□□ -0.9
SRGAP3-205ENST00000475560 SGIP1Q9BQI5 828 aa9.43□□□□□ -0.9
SRGAP3-205ENST00000475560 SUPT5HO00267 1087 aaKnown RBP9.4□□□□□ -0.9
SRGAP3-205ENST00000475560 CHRM1P11229 460 aaPredicted RBP9.39□□□□□ -0.91
SRGAP3-205ENST00000475560 CLEC11AQ9Y240 323 aa9.39□□□□□ -0.91
SRGAP3-205ENST00000475560 STK24Q9Y6E0 443 aa9.39□□□□□ -0.91
SRGAP3-205ENST00000475560 BCL11BQ9C0K0 894 aaPredicted RBP9.38□□□□□ -0.91
SRGAP3-205ENST00000475560 WDR70Q9NW82 654 aa9.38□□□□□ -0.91
SRGAP3-205ENST00000475560 KCNV2Q8TDN2 545 aa9.37□□□□□ -0.91
SRGAP3-205ENST00000475560 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.35□□□□□ -0.91
SRGAP3-205ENST00000475560 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
SRGAP3-205ENST00000475560 FAM212AQ96EL1 285 aa9.33□□□□□ -0.92
SRGAP3-205ENST00000475560 PRKAR2AP13861 404 aaKnown RBP9.32□□□□□ -0.92
SRGAP3-205ENST00000475560 NEUROD2Q15784 382 aa9.32□□□□□ -0.92
SRGAP3-205ENST00000475560 ZC3H15Q8WU90 426 aaKnown RBP9.32□□□□□ -0.92
SRGAP3-205ENST00000475560 EVX2Q03828 476 aa9.31□□□□□ -0.92
SRGAP3-205ENST00000475560 CADPS2Q86UW7 1296 aa9.31□□□□□ -0.92
SRGAP3-205ENST00000475560 PRR29P0C7W0 189 aa9.27□□□□□ -0.93
SRGAP3-205ENST00000475560 SLC24A3Q9HC58 644 aa9.27□□□□□ -0.93
SRGAP3-205ENST00000475560 PODXL2Q9NZ53 605 aa9.26□□□□□ -0.93
SRGAP3-205ENST00000475560 ARHGEF1Q92888 912 aaKnown RBP9.24□□□□□ -0.93
SRGAP3-205ENST00000475560 RASEFQ8IZ41 740 aa9.22□□□□□ -0.93
SRGAP3-205ENST00000475560 C19orf67A6NJJ6 358 aa9.21□□□□□ -0.94
SRGAP3-205ENST00000475560 MNX1P50219 401 aaPredicted RBP9.21□□□□□ -0.94
SRGAP3-205ENST00000475560 CHADLQ6NUI6 762 aa9.21□□□□□ -0.94
SRGAP3-205ENST00000475560 PYGBP11216 843 aa9.2□□□□□ -0.94
SRGAP3-205ENST00000475560 CREBZFQ9NS37 354 aa9.2□□□□□ -0.94
SRGAP3-205ENST00000475560 TESPA1A2RU30 521 aaPredicted RBP9.18□□□□□ -0.94
SRGAP3-205ENST00000475560 SEMA3EO15041 775 aa9.17□□□□□ -0.94
SRGAP3-205ENST00000475560 ZMYND10O75800 440 aa9.17□□□□□ -0.94
SRGAP3-205ENST00000475560 UBTFP17480 764 aaKnown RBP9.17□□□□□ -0.94
SRGAP3-205ENST00000475560 RANGAP1P46060 587 aaPredicted RBP9.16□□□□□ -0.94
SRGAP3-205ENST00000475560 E2F4Q16254 413 aa9.16□□□□□ -0.94
SRGAP3-205ENST00000475560 ZMYND15Q9H091 742 aa9.16□□□□□ -0.94
SRGAP3-205ENST00000475560 FARP1Q9Y4F1 1045 aaPredicted RBP9.11□□□□□ -0.95
SRGAP3-205ENST00000475560 TRIM26Q12899 539 aaPredicted RBP9.1□□□□□ -0.95
SRGAP3-205ENST00000475560 SMYD5Q6GMV2 418 aa9.1□□□□□ -0.95
SRGAP3-205ENST00000475560 BARGINQ6ZT62 677 aa9.1□□□□□ -0.95
SRGAP3-205ENST00000475560 GABBR2O75899 941 aa9.09□□□□□ -0.95
SRGAP3-205ENST00000475560 RSPH6AQ9H0K4 717 aa9.09□□□□□ -0.95
SRGAP3-205ENST00000475560 ZNF467Q7Z7K2 595 aaPredicted RBP9.08□□□□□ -0.96
SRGAP3-205ENST00000475560 MFRPQ9BY79 579 aa9.08□□□□□ -0.96
SRGAP3-205ENST00000475560 PDAP1Q13442 181 aaKnown RBP9.06□□□□□ -0.96
SRGAP3-205ENST00000475560 IL27Q8NEV9 243 aa9.05□□□□□ -0.96
SRGAP3-205ENST00000475560 AK7Q96M32 723 aa9.05□□□□□ -0.96
SRGAP3-205ENST00000475560 PPP1R37O75864 691 aa9.04□□□□□ -0.96
SRGAP3-205ENST00000475560 CD44P16070 742 aaKnown RBP9.04□□□□□ -0.96
SRGAP3-205ENST00000475560 HRCP23327 699 aa9.04□□□□□ -0.96
SRGAP3-205ENST00000475560 GPBP1L1Q9HC44 474 aaPredicted RBP9.03□□□□□ -0.96
SRGAP3-205ENST00000475560 PCDHB8Q9UN66 801 aa8.99□□□□□ -0.97
SRGAP3-205ENST00000475560 PCDHB13Q9Y5F0 798 aa8.99□□□□□ -0.97
SRGAP3-205ENST00000475560 PSEN1P49768 467 aa8.98□□□□□ -0.97
SRGAP3-205ENST00000475560 CLCN6P51797 869 aa8.98□□□□□ -0.97
SRGAP3-205ENST00000475560 KRI1Q8N9T8 703 aaKnown RBP8.98□□□□□ -0.97
SRGAP3-205ENST00000475560 ARIH1Q9Y4X5 557 aaPredicted RBP8.98□□□□□ -0.97
SRGAP3-205ENST00000475560 NPM2Q86SE8 214 aaKnown RBP8.97□□□□□ -0.97
SRGAP3-205ENST00000475560 KDM4CQ9H3R0 1056 aa8.97□□□□□ -0.97
SRGAP3-205ENST00000475560 PDE4AP27815 886 aa8.96□□□□□ -0.98
SRGAP3-205ENST00000475560 NLRP6P59044 892 aa8.96□□□□□ -0.98
SRGAP3-205ENST00000475560 FBXO22Q8NEZ5 403 aa8.96□□□□□ -0.98
SRGAP3-205ENST00000475560 LARP6Q9BRS8 491 aaKnown RBP8.96□□□□□ -0.98
SRGAP3-205ENST00000475560 LHX8Q68G74 356 aa8.95□□□□□ -0.98
SRGAP3-205ENST00000475560 ARID3AQ99856 593 aa8.95□□□□□ -0.98
SRGAP3-205ENST00000475560 NCKAP5LQ9HCH0 1330 aa8.95□□□□□ -0.98
SRGAP3-205ENST00000475560 ZNF579Q8NAF0 562 aaKnown RBP8.94□□□□□ -0.98
SRGAP3-205ENST00000475560 TSPYL2Q9H2G4 693 aaPredicted RBP8.94□□□□□ -0.98
SRGAP3-205ENST00000475560 TRIM66O15016 1216 aa8.93□□□□□ -0.98
SRGAP3-205ENST00000475560 SOX12O15370 315 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms