RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 GSE1Q14687 1217 aa12.08□□□□□ -0.48
SDHB-205ENST00000475506 NKX1-1Q15270 411 aaPredicted RBP12.08□□□□□ -0.48
SDHB-205ENST00000475506 MNX1P50219 401 aaPredicted RBP12.02□□□□□ -0.49
SDHB-205ENST00000475506 DCAF8Q5TAQ9 597 aa12.02□□□□□ -0.49
SDHB-205ENST00000475506 CREBZFQ9NS37 354 aa12.02□□□□□ -0.49
SDHB-205ENST00000475506 RIOK3O14730 519 aaKnown RBP12.01□□□□□ -0.49
SDHB-205ENST00000475506 SPDYE1Q8NFV5 336 aaPredicted RBP12□□□□□ -0.49
SDHB-205ENST00000475506 GTPBP6O43824 516 aaPredicted RBP11.99□□□□□ -0.49
SDHB-205ENST00000475506 AKT1S1Q96B36 256 aa11.95□□□□□ -0.5
SDHB-205ENST00000475506 RASEFQ8IZ41 740 aa11.94□□□□□ -0.5
SDHB-205ENST00000475506 CLEC11AQ9Y240 323 aa11.94□□□□□ -0.5
SDHB-205ENST00000475506 PRR29P0C7W0 189 aa11.92□□□□□ -0.5
SDHB-205ENST00000475506 FAM212AQ96EL1 285 aa11.92□□□□□ -0.5
SDHB-205ENST00000475506 STK25O00506 426 aa11.91□□□□□ -0.5
SDHB-205ENST00000475506 CHRM1P11229 460 aaPredicted RBP11.91□□□□□ -0.5
SDHB-205ENST00000475506 VGFO15240 615 aaPredicted RBP11.9□□□□□ -0.5
SDHB-205ENST00000475506 NBR1Q14596 966 aa11.89□□□□□ -0.51
SDHB-205ENST00000475506 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
SDHB-205ENST00000475506 RBM42Q9BTD8 480 aaKnown RBP11.88□□□□□ -0.51
SDHB-205ENST00000475506 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.85□□□□□ -0.51
SDHB-205ENST00000475506 ZFP91Q96JP5 570 aaPredicted RBP11.85□□□□□ -0.51
SDHB-205ENST00000475506 SGIP1Q9BQI5 828 aa11.85□□□□□ -0.51
SDHB-205ENST00000475506 BCL11BQ9C0K0 894 aaPredicted RBP11.83□□□□□ -0.52
SDHB-205ENST00000475506 PYGBP11216 843 aa11.81□□□□□ -0.52
SDHB-205ENST00000475506 STK24Q9Y6E0 443 aa11.81□□□□□ -0.52
SDHB-205ENST00000475506 PITPNM1O00562 1244 aa11.76□□□□□ -0.53
SDHB-205ENST00000475506 RYDENQ9NUL5 291 aaKnown RBP11.68□□□□□ -0.54
SDHB-205ENST00000475506 CADPS2Q86UW7 1296 aa11.66□□□□□ -0.54
SDHB-205ENST00000475506 CHADLQ6NUI6 762 aa11.65□□□□□ -0.54
SDHB-205ENST00000475506 TSPYL2Q9H2G4 693 aaPredicted RBP11.63□□□□□ -0.55
SDHB-205ENST00000475506 PCDHB8Q9UN66 801 aa11.6□□□□□ -0.55
SDHB-205ENST00000475506 PCDHB13Q9Y5F0 798 aa11.6□□□□□ -0.55
SDHB-205ENST00000475506 ZNF467Q7Z7K2 595 aaPredicted RBP11.59□□□□□ -0.55
SDHB-205ENST00000475506 PDAP1Q13442 181 aaKnown RBP11.57□□□□□ -0.56
SDHB-205ENST00000475506 KCNV2Q8TDN2 545 aa11.57□□□□□ -0.56
SDHB-205ENST00000475506 FARP1Q9Y4F1 1045 aaPredicted RBP11.57□□□□□ -0.56
SDHB-205ENST00000475506 P3H3Q8IVL6 736 aa11.54□□□□□ -0.56
SDHB-205ENST00000475506 MFRPQ9BY79 579 aa11.54□□□□□ -0.56
SDHB-205ENST00000475506 CCDC61Q9Y6R9 512 aa11.54□□□□□ -0.56
SDHB-205ENST00000475506 PSEN1P49768 467 aa11.51□□□□□ -0.57
SDHB-205ENST00000475506 PPP1R37O75864 691 aa11.48□□□□□ -0.57
SDHB-205ENST00000475506 ZNF579Q8NAF0 562 aaKnown RBP11.48□□□□□ -0.57
SDHB-205ENST00000475506 WDR70Q9NW82 654 aa11.48□□□□□ -0.57
SDHB-205ENST00000475506 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.47□□□□□ -0.57
SDHB-205ENST00000475506 TIMELESSQ9UNS1 1208 aa11.46□□□□□ -0.57
SDHB-205ENST00000475506 PRKAR2AP13861 404 aaKnown RBP11.44□□□□□ -0.58
SDHB-205ENST00000475506 IFNL1Q8IU54 200 aa11.44□□□□□ -0.58
SDHB-205ENST00000475506 LMOD2Q6P5Q4 547 aa11.43□□□□□ -0.58
SDHB-205ENST00000475506 FBXO22Q8NEZ5 403 aa11.43□□□□□ -0.58
SDHB-205ENST00000475506 TULP1O00294 542 aaPredicted RBP11.41□□□□□ -0.58
SDHB-205ENST00000475506 EFCAB3Q8N7B9 438 aa11.41□□□□□ -0.58
SDHB-205ENST00000475506 GTF3C3Q9Y5Q9 886 aa11.41□□□□□ -0.58
SDHB-205ENST00000475506 MAP3K13O43283 966 aa11.38□□□□□ -0.59
SDHB-205ENST00000475506 FXR2P51116 673 aaKnown RBP eCLIP11.38□□□□□ -0.592e-8■■■□□ 17.9
SDHB-205ENST00000475506 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
SDHB-205ENST00000475506 KIF12Q96FN5 646 aa11.37□□□□□ -0.59
SDHB-205ENST00000475506 CABP2Q9NPB3 220 aa11.37□□□□□ -0.59
SDHB-205ENST00000475506 TMEM132AQ24JP5 1023 aa11.35□□□□□ -0.59
SDHB-205ENST00000475506 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
SDHB-205ENST00000475506 NLRP6P59044 892 aa11.34□□□□□ -0.59
SDHB-205ENST00000475506 SOX12O15370 315 aa11.33□□□□□ -0.6
SDHB-205ENST00000475506 E2F4Q16254 413 aa11.32□□□□□ -0.6
SDHB-205ENST00000475506 NCKAP5LQ9HCH0 1330 aa11.31□□□□□ -0.6
SDHB-205ENST00000475506 SEMA3EO15041 775 aa11.29□□□□□ -0.6
SDHB-205ENST00000475506 MS4A4AQ96JQ5 239 aa11.29□□□□□ -0.6
SDHB-205ENST00000475506 TESPA1A2RU30 521 aaPredicted RBP11.28□□□□□ -0.6
SDHB-205ENST00000475506 PAK3O75914 559 aaPredicted RBP11.28□□□□□ -0.6
SDHB-205ENST00000475506 ZC3H15Q8WU90 426 aaKnown RBP11.28□□□□□ -0.6
SDHB-205ENST00000475506 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
SDHB-205ENST00000475506 PIP4P2Q8N4L2 257 aa11.24□□□□□ -0.61
SDHB-205ENST00000475506 LARP6Q9BRS8 491 aaKnown RBP11.23□□□□□ -0.61
SDHB-205ENST00000475506 PHF12Q96QT6 1004 aa11.22□□□□□ -0.61
SDHB-205ENST00000475506 MFSD10Q14728 455 aa11.21□□□□□ -0.61
SDHB-205ENST00000475506 CRISPLD2Q9H0B8 497 aa11.21□□□□□ -0.61
SDHB-205ENST00000475506 POTEHQ6S545 545 aa11.2□□□□□ -0.62
SDHB-205ENST00000475506 CHRDL2Q6WN34 429 aa11.19□□□□□ -0.62
SDHB-205ENST00000475506 ZRANB1Q9UGI0 708 aa11.19□□□□□ -0.62
SDHB-205ENST00000475506 SLC24A3Q9HC58 644 aa11.18□□□□□ -0.62
SDHB-205ENST00000475506 PDE4AP27815 886 aa11.17□□□□□ -0.62
SDHB-205ENST00000475506 TRPC6Q9Y210 931 aa11.17□□□□□ -0.62
SDHB-205ENST00000475506 ARIH1Q9Y4X5 557 aaPredicted RBP11.15□□□□□ -0.62
SDHB-205ENST00000475506 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
SDHB-205ENST00000475506 CAMK2BQ13554 666 aa11.14□□□□□ -0.63
SDHB-205ENST00000475506 DDX27Q96GQ7 796 aaKnown RBP11.13□□□□□ -0.63
SDHB-205ENST00000475506 TMEM106CQ9BVX2 250 aa11.13□□□□□ -0.63
SDHB-205ENST00000475506 ZMYND10O75800 440 aa11.12□□□□□ -0.63
SDHB-205ENST00000475506 NEUROD2Q15784 382 aa11.12□□□□□ -0.63
SDHB-205ENST00000475506 ERICH6Q7L0X2 663 aa11.1□□□□□ -0.63
SDHB-205ENST00000475506 MS4A3Q96HJ5 214 aa11.09□□□□□ -0.63
SDHB-205ENST00000475506 C14orf37Q86TY3 774 aa11.07□□□□□ -0.64
SDHB-205ENST00000475506 GOLGA2Q08379 1002 aa11.06□□□□□ -0.64
SDHB-205ENST00000475506 MLLT3P42568 568 aaPredicted RBP11.05□□□□□ -0.64
SDHB-205ENST00000475506 SMYD5Q6GMV2 418 aa11.05□□□□□ -0.64
SDHB-205ENST00000475506 BARGINQ6ZT62 677 aa11.05□□□□□ -0.64
SDHB-205ENST00000475506 ILDR1Q86SU0 546 aaPredicted RBP11.05□□□□□ -0.64
SDHB-205ENST00000475506 MKRN3Q13064 507 aaKnown RBP11.03□□□□□ -0.64
SDHB-205ENST00000475506 RBM26Q5T8P6 1007 aaKnown RBP11.03□□□□□ -0.64
SDHB-205ENST00000475506 PPP1R15BQ5SWA1 713 aa11.01□□□□□ -0.65
SDHB-205ENST00000475506 GPHNQ9NQX3 736 aaPredicted RBP11□□□□□ -0.65
SDHB-205ENST00000475506 TTLL13PA6NNM8 815 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms