RNA–Protein interactions for RNA: ENST00000475277.1

LYST-209, Transcript of lysosomal trafficking regulator, humanhuman

TSL 5

Gene LYST, Length 718 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-209ENST00000475277 RASEFQ8IZ41 740 aa14.3□□□□□ -0.12
LYST-209ENST00000475277 KIF12Q96FN5 646 aa14.25□□□□□ -0.13
LYST-209ENST00000475277 ASTLQ6HA08 431 aaPredicted RBP14.24□□□□□ -0.13
LYST-209ENST00000475277 ZBTB47Q9UFB7 747 aaPredicted RBP14.24□□□□□ -0.13
LYST-209ENST00000475277 PELP1Q8IZL8 1130 aaKnown RBP14.23□□□□□ -0.13
LYST-209ENST00000475277 ATMINO43313 823 aaPredicted RBP14.2□□□□□ -0.14
LYST-209ENST00000475277 NUBP1P53384 320 aa14.19□□□□□ -0.14
LYST-209ENST00000475277 MAP3K13O43283 966 aa14.15□□□□□ -0.14
LYST-209ENST00000475277 FBXO3Q9UK99 471 aa14.15□□□□□ -0.14
LYST-209ENST00000475277 POTEB2H3BUK9 544 aa14.13□□□□□ -0.15
LYST-209ENST00000475277 SLC39A7Q92504 469 aa14.11□□□□□ -0.15
LYST-209ENST00000475277 METRNQ9UJH8 293 aa14.11□□□□□ -0.15
LYST-209ENST00000475277 TRPC6Q9Y210 931 aa14.1□□□□□ -0.15
LYST-209ENST00000475277 ATN1P54259 1190 aaPredicted RBP14.09□□□□□ -0.15
LYST-209ENST00000475277 BMP2KQ9NSY1 1161 aaPredicted RBP14.09□□□□□ -0.15
LYST-209ENST00000475277 C7P10643 843 aa14.08□□□□□ -0.16
LYST-209ENST00000475277 TIE1P35590 1138 aa14.07□□□□□ -0.16
LYST-209ENST00000475277 FAM212AQ96EL1 285 aa14.07□□□□□ -0.16
LYST-209ENST00000475277 SGIP1Q9BQI5 828 aa14.07□□□□□ -0.16
LYST-209ENST00000475277 OTUD5Q96G74 571 aa14.06□□□□□ -0.16
LYST-209ENST00000475277 PCDHB13Q9Y5F0 798 aa14.01□□□□□ -0.17
LYST-209ENST00000475277 VASPP50552 380 aaPredicted RBP14□□□□□ -0.17
LYST-209ENST00000475277 TTLL13PA6NNM8 815 aa13.98□□□□□ -0.17
LYST-209ENST00000475277 POTEJP0CG39 1038 aa13.96□□□□□ -0.17
LYST-209ENST00000475277 IFNL1Q8IU54 200 aa13.95□□□□□ -0.18
LYST-209ENST00000475277 POTEFA5A3E0 1075 aa13.93□□□□□ -0.18
LYST-209ENST00000475277 DCAF8Q5TAQ9 597 aa13.91□□□□□ -0.18
LYST-209ENST00000475277 TRIM35Q9UPQ4 493 aa13.88□□□□□ -0.19
LYST-209ENST00000475277 MAMSTRQ6ZN01 415 aa13.87□□□□□ -0.19
LYST-209ENST00000475277 PYGBP11216 843 aa13.86□□□□□ -0.19
LYST-209ENST00000475277 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
LYST-209ENST00000475277 IER5LQ5T953 404 aa13.85□□□□□ -0.19
LYST-209ENST00000475277 TMEM106CQ9BVX2 250 aa13.83□□□□□ -0.2
LYST-209ENST00000475277 COLQQ9Y215 455 aaPredicted RBP13.83□□□□□ -0.2
LYST-209ENST00000475277 GSE1Q14687 1217 aa13.81□□□□□ -0.2
LYST-209ENST00000475277 SEC24BO95487 1268 aa13.79□□□□□ -0.2
LYST-209ENST00000475277 SCUBE2Q9NQ36 999 aa13.79□□□□□ -0.2
LYST-209ENST00000475277 IFNLR1Q8IU57 520 aaPredicted RBP13.75□□□□□ -0.21
LYST-209ENST00000475277 PCDHB8Q9UN66 801 aa13.75□□□□□ -0.21
LYST-209ENST00000475277 CHRM1P11229 460 aaPredicted RBP13.72□□□□□ -0.21
LYST-209ENST00000475277 IRX5P78411 483 aaPredicted RBP13.7□□□□□ -0.22
LYST-209ENST00000475277 ZNF467Q7Z7K2 595 aaPredicted RBP13.7□□□□□ -0.22
LYST-209ENST00000475277 SPOCK2Q92563 424 aa13.7□□□□□ -0.22
LYST-209ENST00000475277 PLCG2P16885 1265 aa13.66□□□□□ -0.22
LYST-209ENST00000475277 POTEMA6NI47 508 aa13.63□□□□□ -0.23
LYST-209ENST00000475277 LCE2DQ5TA82 110 aaPredicted RBP13.62□□□□□ -0.23
LYST-209ENST00000475277 POTEGQ6S5H5 508 aa13.6□□□□□ -0.23
LYST-209ENST00000475277 OCEL1Q9H607 264 aa13.6□□□□□ -0.23
LYST-209ENST00000475277 CIZ1Q9ULV3 898 aaPredicted RBP13.57□□□□□ -0.24
LYST-209ENST00000475277 PSEN1P49768 467 aa13.55□□□□□ -0.24
LYST-209ENST00000475277 PDAP1Q13442 181 aaKnown RBP13.52□□□□□ -0.25
LYST-209ENST00000475277 PDCD7Q8N8D1 485 aaKnown RBP13.52□□□□□ -0.25
LYST-209ENST00000475277 FAM163AQ96GL9 167 aaPredicted RBP13.52□□□□□ -0.25
LYST-209ENST00000475277 SLAIN1Q8ND83 568 aa13.51□□□□□ -0.25
LYST-209ENST00000475277 GOLGA2Q08379 1002 aa13.49□□□□□ -0.25
LYST-209ENST00000475277 MKRN3Q13064 507 aaKnown RBP13.49□□□□□ -0.25
LYST-209ENST00000475277 TRIM41Q8WV44 630 aa13.46□□□□□ -0.25
LYST-209ENST00000475277 ILDR1Q86SU0 546 aaPredicted RBP13.44□□□□□ -0.26
LYST-209ENST00000475277 PLSCR2Q9NRY7 297 aa13.43□□□□□ -0.26
LYST-209ENST00000475277 PCDH10Q9P2E7 1040 aa13.43□□□□□ -0.26
LYST-209ENST00000475277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.41□□□□□ -0.26
LYST-209ENST00000475277 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.41□□□□□ -0.26
LYST-209ENST00000475277 L3MBTL3Q96JM7 780 aaPredicted RBP13.38□□□□□ -0.27
LYST-209ENST00000475277 CABP2Q9NPB3 220 aa13.38□□□□□ -0.27
LYST-209ENST00000475277 ST18O60284 1047 aa13.35□□□□□ -0.27
LYST-209ENST00000475277 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.28
LYST-209ENST00000475277 RNF25Q96BH1 459 aaPredicted RBP13.3□□□□□ -0.28
LYST-209ENST00000475277 DPY19L2Q6NUT2 758 aa13.29□□□□□ -0.28
LYST-209ENST00000475277 SNPHO15079 494 aa13.28□□□□□ -0.28
LYST-209ENST00000475277 RIOK3O14730 519 aaKnown RBP13.26□□□□□ -0.29
LYST-209ENST00000475277 TMEM121BQ9BXQ6 578 aaPredicted RBP13.25□□□□□ -0.29
LYST-209ENST00000475277 EFCAB3Q8N7B9 438 aa13.24□□□□□ -0.29
LYST-209ENST00000475277 BOLA1Q9Y3E2 137 aa13.23□□□□□ -0.29
LYST-209ENST00000475277 VGFO15240 615 aaPredicted RBP13.21□□□□□ -0.29
LYST-209ENST00000475277 CDAN1Q8IWY9 1227 aa13.21□□□□□ -0.29
LYST-209ENST00000475277 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
LYST-209ENST00000475277 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
LYST-209ENST00000475277 G3V3G9 751 aa13.17□□□□□ -0.3
LYST-209ENST00000475277 SOX12O15370 315 aa13.13□□□□□ -0.31
LYST-209ENST00000475277 MARVELD3Q96A59 401 aa13.11□□□□□ -0.31
LYST-209ENST00000475277 MS4A4AQ96JQ5 239 aa13.09□□□□□ -0.31
LYST-209ENST00000475277 MICALL2Q8IY33 904 aa13.07□□□□□ -0.32
LYST-209ENST00000475277 PHF8Q9UPP1 1060 aa13.07□□□□□ -0.32
LYST-209ENST00000475277 HOXB3P14651 431 aaPredicted RBP13.06□□□□□ -0.32
LYST-209ENST00000475277 TAOK2Q9UL54 1235 aa13.06□□□□□ -0.32
LYST-209ENST00000475277 EMP3P54852 163 aa13.04□□□□□ -0.32
LYST-209ENST00000475277 ECM2O94769 699 aaPredicted RBP13.03□□□□□ -0.32
LYST-209ENST00000475277 BCL11BQ9C0K0 894 aaPredicted RBP13.03□□□□□ -0.32
LYST-209ENST00000475277 PKD2Q13563 968 aa13.01□□□□□ -0.33
LYST-209ENST00000475277 TMEM92Q6UXU6 159 aa13□□□□□ -0.33
LYST-209ENST00000475277 FBXO22Q8NEZ5 403 aa12.99□□□□□ -0.33
LYST-209ENST00000475277 NLRP6P59044 892 aa12.98□□□□□ -0.33
LYST-209ENST00000475277 STK24Q9Y6E0 443 aa12.98□□□□□ -0.33
LYST-209ENST00000475277 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
LYST-209ENST00000475277 POTEB3A0JP26 581 aa12.96□□□□□ -0.33
LYST-209ENST00000475277 POTEBQ6S5H4 581 aa12.96□□□□□ -0.33
LYST-209ENST00000475277 HS3ST6Q96QI5 342 aa12.96□□□□□ -0.33
LYST-209ENST00000475277 STK25O00506 426 aa12.95□□□□□ -0.34
LYST-209ENST00000475277 RGL2O15211 777 aa12.95□□□□□ -0.34
LYST-209ENST00000475277 HOXB1P14653 301 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms