RNA–Protein interactions for RNA: ENST00000474830.1

GSK3B-204, Transcript of glycogen synthase kinase 3 beta, humanhuman

TSL 2

Gene GSK3B, Length 518 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3B-204ENST00000474830 NUBP1P53384 320 aa13.14□□□□□ -0.31
GSK3B-204ENST00000474830 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
GSK3B-204ENST00000474830 DCBLD2Q96PD2 775 aa13.05□□□□□ -0.32
GSK3B-204ENST00000474830 KIF12Q96FN5 646 aa13.04□□□□□ -0.32
GSK3B-204ENST00000474830 MS4A3Q96HJ5 214 aa13.04□□□□□ -0.32
GSK3B-204ENST00000474830 MAP3K13O43283 966 aa12.97□□□□□ -0.33
GSK3B-204ENST00000474830 FAM212AQ96EL1 285 aa12.96□□□□□ -0.33
GSK3B-204ENST00000474830 IFNLR1Q8IU57 520 aaPredicted RBP12.95□□□□□ -0.34
GSK3B-204ENST00000474830 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
GSK3B-204ENST00000474830 ASTLQ6HA08 431 aaPredicted RBP12.92□□□□□ -0.34
GSK3B-204ENST00000474830 PELP1Q8IZL8 1130 aaKnown RBP12.9□□□□□ -0.34
GSK3B-204ENST00000474830 DCAF8Q5TAQ9 597 aa12.89□□□□□ -0.35
GSK3B-204ENST00000474830 SGIP1Q9BQI5 828 aa12.89□□□□□ -0.35
GSK3B-204ENST00000474830 TRPC6Q9Y210 931 aa12.89□□□□□ -0.35
GSK3B-204ENST00000474830 ATMINO43313 823 aaPredicted RBP12.88□□□□□ -0.35
GSK3B-204ENST00000474830 LHX8Q68G74 356 aa12.88□□□□□ -0.35
GSK3B-204ENST00000474830 PCDHB13Q9Y5F0 798 aa12.85□□□□□ -0.35
GSK3B-204ENST00000474830 BMP2KQ9NSY1 1161 aaPredicted RBP12.83□□□□□ -0.36
GSK3B-204ENST00000474830 ATN1P54259 1190 aaPredicted RBP12.82□□□□□ -0.36
GSK3B-204ENST00000474830 IFNL1Q8IU54 200 aa12.82□□□□□ -0.36
GSK3B-204ENST00000474830 TIE1P35590 1138 aa12.81□□□□□ -0.36
GSK3B-204ENST00000474830 SPOCK2Q92563 424 aa12.81□□□□□ -0.36
GSK3B-204ENST00000474830 PYGBP11216 843 aa12.8□□□□□ -0.36
GSK3B-204ENST00000474830 GSE1Q14687 1217 aa12.8□□□□□ -0.36
GSK3B-204ENST00000474830 TTLL13PA6NNM8 815 aa12.75□□□□□ -0.37
GSK3B-204ENST00000474830 SLC39A7Q92504 469 aa12.75□□□□□ -0.37
GSK3B-204ENST00000474830 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
GSK3B-204ENST00000474830 CHRM1P11229 460 aaPredicted RBP12.74□□□□□ -0.37
GSK3B-204ENST00000474830 C7P10643 843 aa12.73□□□□□ -0.37
GSK3B-204ENST00000474830 METRNQ9UJH8 293 aa12.73□□□□□ -0.37
GSK3B-204ENST00000474830 PCDHB8Q9UN66 801 aa12.69□□□□□ -0.38
GSK3B-204ENST00000474830 POTEFA5A3E0 1075 aa12.66□□□□□ -0.38
GSK3B-204ENST00000474830 CIZ1Q9ULV3 898 aaPredicted RBP12.66□□□□□ -0.38
GSK3B-204ENST00000474830 TMEM106CQ9BVX2 250 aa12.65□□□□□ -0.38
GSK3B-204ENST00000474830 TRIM35Q9UPQ4 493 aa12.65□□□□□ -0.38
GSK3B-204ENST00000474830 ZNF467Q7Z7K2 595 aaPredicted RBP12.63□□□□□ -0.39
GSK3B-204ENST00000474830 POTEJP0CG39 1038 aa12.62□□□□□ -0.39
GSK3B-204ENST00000474830 OTUD5Q96G74 571 aa12.61□□□□□ -0.39
GSK3B-204ENST00000474830 IER5LQ5T953 404 aa12.6□□□□□ -0.39
GSK3B-204ENST00000474830 COLQQ9Y215 455 aaPredicted RBP12.58□□□□□ -0.4
GSK3B-204ENST00000474830 TRIM41Q8WV44 630 aa12.54□□□□□ -0.4
GSK3B-204ENST00000474830 PSEN1P49768 467 aa12.52□□□□□ -0.41
GSK3B-204ENST00000474830 IRX5P78411 483 aaPredicted RBP12.51□□□□□ -0.41
GSK3B-204ENST00000474830 SEC24BO95487 1268 aa12.5□□□□□ -0.41
GSK3B-204ENST00000474830 PDAP1Q13442 181 aaKnown RBP12.48□□□□□ -0.41
GSK3B-204ENST00000474830 MAMSTRQ6ZN01 415 aa12.45□□□□□ -0.42
GSK3B-204ENST00000474830 RNF25Q96BH1 459 aaPredicted RBP12.44□□□□□ -0.42
GSK3B-204ENST00000474830 OCEL1Q9H607 264 aa12.43□□□□□ -0.42
GSK3B-204ENST00000474830 PLCG2P16885 1265 aa12.41□□□□□ -0.42
GSK3B-204ENST00000474830 SCUBE2Q9NQ36 999 aa12.39□□□□□ -0.43
GSK3B-204ENST00000474830 ILDR1Q86SU0 546 aaPredicted RBP12.38□□□□□ -0.43
GSK3B-204ENST00000474830 PDCD7Q8N8D1 485 aaKnown RBP12.38□□□□□ -0.43
GSK3B-204ENST00000474830 RIOK3O14730 519 aaKnown RBP12.37□□□□□ -0.43
GSK3B-204ENST00000474830 MKRN3Q13064 507 aaKnown RBP12.37□□□□□ -0.43
GSK3B-204ENST00000474830 GOLGA2Q08379 1002 aa12.36□□□□□ -0.43
GSK3B-204ENST00000474830 PKD2Q13563 968 aa12.34□□□□□ -0.43
GSK3B-204ENST00000474830 CABP2Q9NPB3 220 aa12.34□□□□□ -0.43
GSK3B-204ENST00000474830 VGFO15240 615 aaPredicted RBP12.31□□□□□ -0.44
GSK3B-204ENST00000474830 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.31□□□□□ -0.44
GSK3B-204ENST00000474830 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.29□□□□□ -0.44
GSK3B-204ENST00000474830 ZFP91Q96JP5 570 aaPredicted RBP12.29□□□□□ -0.44
GSK3B-204ENST00000474830 ECM2O94769 699 aaPredicted RBP12.28□□□□□ -0.44
GSK3B-204ENST00000474830 EFCAB3Q8N7B9 438 aa12.25□□□□□ -0.45
GSK3B-204ENST00000474830 DPY19L2Q6NUT2 758 aa12.23□□□□□ -0.45
GSK3B-204ENST00000474830 RGL2O15211 777 aa12.22□□□□□ -0.45
GSK3B-204ENST00000474830 LCE2DQ5TA82 110 aaPredicted RBP12.21□□□□□ -0.45
GSK3B-204ENST00000474830 SLAIN1Q8ND83 568 aa12.21□□□□□ -0.45
GSK3B-204ENST00000474830 L3MBTL3Q96JM7 780 aaPredicted RBP12.21□□□□□ -0.45
GSK3B-204ENST00000474830 TAOK2Q9UL54 1235 aa12.18□□□□□ -0.46
GSK3B-204ENST00000474830 SOX12O15370 315 aa12.17□□□□□ -0.46
GSK3B-204ENST00000474830 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.17□□□□□ -0.46
GSK3B-204ENST00000474830 BCL11BQ9C0K0 894 aaPredicted RBP12.16□□□□□ -0.46
GSK3B-204ENST00000474830 MS4A4AQ96JQ5 239 aa12.13□□□□□ -0.47
GSK3B-204ENST00000474830 FAM163AQ96GL9 167 aaPredicted RBP12.12□□□□□ -0.47
GSK3B-204ENST00000474830 TMEM121BQ9BXQ6 578 aaPredicted RBP12.12□□□□□ -0.47
GSK3B-204ENST00000474830 PLSCR2Q9NRY7 297 aa12.12□□□□□ -0.47
GSK3B-204ENST00000474830 BOLA1Q9Y3E2 137 aa12.12□□□□□ -0.47
GSK3B-204ENST00000474830 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
GSK3B-204ENST00000474830 STK24Q9Y6E0 443 aa12.11□□□□□ -0.47
GSK3B-204ENST00000474830 STK25O00506 426 aa12.1□□□□□ -0.47
GSK3B-204ENST00000474830 C3orf67Q6ZVT6 689 aa12.1□□□□□ -0.47
GSK3B-204ENST00000474830 POTEMA6NI47 508 aa12.09□□□□□ -0.47
GSK3B-204ENST00000474830 POTEGQ6S5H5 508 aa12.07□□□□□ -0.48
GSK3B-204ENST00000474830 FBXO22Q8NEZ5 403 aa12.07□□□□□ -0.48
GSK3B-204ENST00000474830 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
GSK3B-204ENST00000474830 G3V3G9 751 aa12.03□□□□□ -0.48
GSK3B-204ENST00000474830 NLRP6P59044 892 aa12.03□□□□□ -0.48
GSK3B-204ENST00000474830 ST18O60284 1047 aa12.02□□□□□ -0.49
GSK3B-204ENST00000474830 MICALL2Q8IY33 904 aa12.02□□□□□ -0.49
GSK3B-204ENST00000474830 SNPHO15079 494 aa11.99□□□□□ -0.49
GSK3B-204ENST00000474830 TMEM92Q6UXU6 159 aa11.97□□□□□ -0.49
GSK3B-204ENST00000474830 HS6ST3Q8IZP7 471 aa11.96□□□□□ -0.49
GSK3B-204ENST00000474830 HOXB3P14651 431 aaPredicted RBP11.9□□□□□ -0.5
GSK3B-204ENST00000474830 PCDH10Q9P2E7 1040 aa11.9□□□□□ -0.5
GSK3B-204ENST00000474830 DNAJC5Q9H3Z4 198 aa11.89□□□□□ -0.51
GSK3B-204ENST00000474830 CHGAP10645 457 aaKnown RBP11.88□□□□□ -0.51
GSK3B-204ENST00000474830 PPP1R37O75864 691 aa11.86□□□□□ -0.51
GSK3B-204ENST00000474830 NKX1-1Q15270 411 aaPredicted RBP11.83□□□□□ -0.52
GSK3B-204ENST00000474830 MARVELD3Q96A59 401 aa11.83□□□□□ -0.52
GSK3B-204ENST00000474830 KIF3CO14782 793 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms