RNA–Protein interactions for RNA: ENST00000474612.1

NOTCH4-204, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-204ENST00000474612 NPM2Q86SE8 214 aaKnown RBP24.11■■□□□ 1.45
NOTCH4-204ENST00000474612 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.09■■□□□ 1.45
NOTCH4-204ENST00000474612 EIF4G2P78344 907 aaKnown RBP eCLIP24.07■■□□□ 1.44
NOTCH4-204ENST00000474612 CEP164Q9UPV0 1460 aa24.07■■□□□ 1.44
NOTCH4-204ENST00000474612 CEP162Q5TB80 1403 aa24.06■■□□□ 1.44
NOTCH4-204ENST00000474612 A0A0G2JS52 829 aa24.06■■□□□ 1.44
NOTCH4-204ENST00000474612 SALL2Q9Y467 1007 aaPredicted RBP24.05■■□□□ 1.44
NOTCH4-204ENST00000474612 ANP32AP39687 249 aaKnown RBP24.05■■□□□ 1.44
NOTCH4-204ENST00000474612 ZBTB7CA1YPR0 619 aa24.03■■□□□ 1.44
NOTCH4-204ENST00000474612 RGL3Q3MIN7 710 aa24.03■■□□□ 1.44
NOTCH4-204ENST00000474612 HAP1P54257 671 aaPredicted RBP24.01■■□□□ 1.43
NOTCH4-204ENST00000474612 SENP3Q9H4L4 574 aaPredicted RBP24.01■■□□□ 1.43
NOTCH4-204ENST00000474612 UPF2Q9HAU5 1272 aaKnown RBP24.01■■□□□ 1.43
NOTCH4-204ENST00000474612 CDCA8Q53HL2 280 aa24■■□□□ 1.43
NOTCH4-204ENST00000474612 MRS2Q9HD23 443 aa24■■□□□ 1.43
NOTCH4-204ENST00000474612 TRHP20396 242 aaPredicted RBP23.98■■□□□ 1.43
NOTCH4-204ENST00000474612 TNIKQ9UKE5 1360 aa23.97■■□□□ 1.43
NOTCH4-204ENST00000474612 PLEKHG5O94827 1062 aa23.95■■□□□ 1.42
NOTCH4-204ENST00000474612 HSP90AA1P07900 732 aaKnown RBP23.95■■□□□ 1.42
NOTCH4-204ENST00000474612 PDS5BQ9NTI5 1447 aa23.92■■□□□ 1.42
NOTCH4-204ENST00000474612 CARMIL1Q5VZK9 1371 aa23.91■■□□□ 1.42
NOTCH4-204ENST00000474612 CCNB3Q8WWL7 1395 aa23.9■■□□□ 1.42
NOTCH4-204ENST00000474612 CECR2Q9BXF3 1484 aa23.9■■□□□ 1.42
NOTCH4-204ENST00000474612 CUX2O14529 1486 aa23.89■■□□□ 1.42
NOTCH4-204ENST00000474612 CFAP53Q96M91 514 aa23.89■■□□□ 1.42
NOTCH4-204ENST00000474612 FHAD1B1AJZ9 1412 aa23.89■■□□□ 1.41
NOTCH4-204ENST00000474612 FKBP8Q14318 412 aa23.87■■□□□ 1.41
NOTCH4-204ENST00000474612 MYH16Q9H6N6 1097 aa23.86■■□□□ 1.41
NOTCH4-204ENST00000474612 EIF4G1Q04637 1599 aaKnown RBP23.84■■□□□ 1.41
NOTCH4-204ENST00000474612 POGKQ9P215 609 aa23.84■■□□□ 1.41
NOTCH4-204ENST00000474612 HDGFP51858 240 aaKnown RBP23.83■■□□□ 1.41
NOTCH4-204ENST00000474612 KNSTRNQ9Y448 316 aa23.82■■□□□ 1.4
NOTCH4-204ENST00000474612 KANK1Q14678 1352 aa23.81■■□□□ 1.4
NOTCH4-204ENST00000474612 SMARCA2P51531 1590 aa23.8■■□□□ 1.4
NOTCH4-204ENST00000474612 CARD11Q9BXL7 1154 aa23.8■■□□□ 1.4
NOTCH4-204ENST00000474612 CARMIL2Q6F5E8 1435 aa23.79■■□□□ 1.4
NOTCH4-204ENST00000474612 CCDC136Q96JN2 1154 aa23.79■■□□□ 1.4
NOTCH4-204ENST00000474612 HIRIP3Q9BW71 556 aaPredicted RBP23.78■■□□□ 1.4
NOTCH4-204ENST00000474612 LMOD2Q6P5Q4 547 aa23.73■■□□□ 1.39
NOTCH4-204ENST00000474612 PPM1GO15355 546 aaPredicted RBP23.72■■□□□ 1.39
NOTCH4-204ENST00000474612 ANP32BQ92688 251 aaKnown RBP23.72■■□□□ 1.39
NOTCH4-204ENST00000474612 MLECQ14165 292 aa23.71■■□□□ 1.39
NOTCH4-204ENST00000474612 SOGA1O94964 1423 aa23.68■■□□□ 1.38
NOTCH4-204ENST00000474612 NUDCQ9Y266 331 aa23.68■■□□□ 1.38
NOTCH4-204ENST00000474612 MAPK8IP3Q9UPT6 1336 aa23.62■■□□□ 1.37
NOTCH4-204ENST00000474612 ARXQ96QS3 562 aa23.61■■□□□ 1.37
NOTCH4-204ENST00000474612 CCDC88BA6NC98 1476 aa23.6■■□□□ 1.37
NOTCH4-204ENST00000474612 TDRD9Q8NDG6 1382 aaKnown RBP23.6■■□□□ 1.37
NOTCH4-204ENST00000474612 EFCAB2Q5VUJ9 269 aa23.58■■□□□ 1.37
NOTCH4-204ENST00000474612 GGT6Q6P531 493 aa23.58■■□□□ 1.37
NOTCH4-204ENST00000474612 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
NOTCH4-204ENST00000474612 CADPSQ9ULU8 1353 aa23.53■■□□□ 1.36
NOTCH4-204ENST00000474612 DCAF11Q8TEB1 546 aa23.53■■□□□ 1.36
NOTCH4-204ENST00000474612 TMF1P82094 1093 aa23.52■■□□□ 1.36
NOTCH4-204ENST00000474612 PNNQ9H307 717 aaKnown RBP23.51■■□□□ 1.35
NOTCH4-204ENST00000474612 MIER1Q8N108 512 aa23.5■■□□□ 1.35
NOTCH4-204ENST00000474612 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
NOTCH4-204ENST00000474612 FMN1Q68DA7 1419 aa23.48■■□□□ 1.35
NOTCH4-204ENST00000474612 SIN3AQ96ST3 1273 aa23.47■■□□□ 1.35
NOTCH4-204ENST00000474612 ARHGAP35Q9NRY4 1499 aa23.46■■□□□ 1.35
NOTCH4-204ENST00000474612 SRPK2P78362 688 aaKnown RBP23.46■■□□□ 1.35
NOTCH4-204ENST00000474612 LAS1LQ9Y4W2 734 aaKnown RBP23.45■■□□□ 1.34
NOTCH4-204ENST00000474612 NEUROD2Q15784 382 aa23.44■■□□□ 1.34
NOTCH4-204ENST00000474612 FTSJ3Q8IY81 847 aaKnown RBP23.44■■□□□ 1.34
NOTCH4-204ENST00000474612 NPHP1O15259 732 aa23.44■■□□□ 1.34
NOTCH4-204ENST00000474612 TIMELESSQ9UNS1 1208 aa23.43■■□□□ 1.34
NOTCH4-204ENST00000474612 TNNT2P45379 298 aaPredicted RBP23.42■■□□□ 1.34
NOTCH4-204ENST00000474612 U2SURPO15042 1029 aaKnown RBP23.41■■□□□ 1.34
NOTCH4-204ENST00000474612 CHMP4BQ9H444 224 aaKnown RBP23.39■■□□□ 1.34
NOTCH4-204ENST00000474612 EIF5BO60841 1220 aaKnown RBP23.39■■□□□ 1.34
NOTCH4-204ENST00000474612 VPS8Q8N3P4 1428 aa23.38■■□□□ 1.33
NOTCH4-204ENST00000474612 PKD2Q13563 968 aa23.38■■□□□ 1.33
NOTCH4-204ENST00000474612 IRX6P78412 446 aaPredicted RBP23.36■■□□□ 1.33
NOTCH4-204ENST00000474612 CC2D1BQ5T0F9 858 aaKnown RBP23.35■■□□□ 1.33
NOTCH4-204ENST00000474612 ANKRD30AQ9BXX3 1397 aa23.35■■□□□ 1.33
NOTCH4-204ENST00000474612 CASC1Q6TDU7 716 aa23.35■■□□□ 1.33
NOTCH4-204ENST00000474612 TOP2AP11388 1531 aaKnown RBP23.34■■□□□ 1.33
NOTCH4-204ENST00000474612 RSPH4AQ5TD94 716 aa23.34■■□□□ 1.33
NOTCH4-204ENST00000474612 MS4A1P11836 297 aa23.33■■□□□ 1.33
NOTCH4-204ENST00000474612 SAFB2Q14151 953 aaKnown RBP eCLIP23.33■■□□□ 1.32
NOTCH4-204ENST00000474612 HDGFL2Q7Z4V5 671 aaPredicted RBP23.32■■□□□ 1.32
NOTCH4-204ENST00000474612 JPH4Q96JJ6 628 aa23.32■■□□□ 1.32
NOTCH4-204ENST00000474612 SETD5Q9C0A6 1442 aa23.32■■□□□ 1.32
NOTCH4-204ENST00000474612 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
NOTCH4-204ENST00000474612 STK26Q9P289 416 aa23.32■■□□□ 1.32
NOTCH4-204ENST00000474612 MORC1Q86VD1 984 aa23.31■■□□□ 1.32
NOTCH4-204ENST00000474612 BECN1Q14457 450 aa23.3■■□□□ 1.32
NOTCH4-204ENST00000474612 KIF3BO15066 747 aa23.29■■□□□ 1.32
NOTCH4-204ENST00000474612 SOX12O15370 315 aa23.29■■□□□ 1.32
NOTCH4-204ENST00000474612 CDK11BP21127 795 aaKnown RBP23.29■■□□□ 1.32
NOTCH4-204ENST00000474612 NUP155O75694 1391 aa23.28■■□□□ 1.32
NOTCH4-204ENST00000474612 ATAD2BQ9ULI0 1458 aa23.28■■□□□ 1.32
NOTCH4-204ENST00000474612 RAPGEF2Q9Y4G8 1499 aa23.27■■□□□ 1.32
NOTCH4-204ENST00000474612 EID1Q9Y6B2 187 aa23.27■■□□□ 1.32
NOTCH4-204ENST00000474612 SPAG9O60271 1321 aaKnown RBP23.27■■□□□ 1.31
NOTCH4-204ENST00000474612 NCLP19338 710 aaKnown RBP23.25■■□□□ 1.31
NOTCH4-204ENST00000474612 SENP3-EIF4A1A0A087X0R7 540 aa23.22■■□□□ 1.31
NOTCH4-204ENST00000474612 OS9Q13438 667 aaPredicted RBP23.22■■□□□ 1.31
NOTCH4-204ENST00000474612 FRAT1Q92837 279 aaPredicted RBP23.22■■□□□ 1.31
NOTCH4-204ENST00000474612 DDRGK1Q96HY6 314 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms