RNA–Protein interactions for RNA: ENST00000474557.1

HMGN1P10-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 10, humanhuman

BASIC

Gene HMGN1P10, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P10-201ENST00000474557 SCUBE2Q9NQ36 999 aa13.33□□□□□ -0.28
HMGN1P10-201ENST00000474557 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
HMGN1P10-201ENST00000474557 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
HMGN1P10-201ENST00000474557 MS4A3Q96HJ5 214 aa13.29□□□□□ -0.28
HMGN1P10-201ENST00000474557 FAM163AQ96GL9 167 aaPredicted RBP13.27□□□□□ -0.29
HMGN1P10-201ENST00000474557 MNX1P50219 401 aaPredicted RBP13.23□□□□□ -0.29
HMGN1P10-201ENST00000474557 POTEJP0CG39 1038 aa13.19□□□□□ -0.3
HMGN1P10-201ENST00000474557 TSPYL2Q9H2G4 693 aaPredicted RBP13.14□□□□□ -0.31
HMGN1P10-201ENST00000474557 ATN1P54259 1190 aaPredicted RBP13.12□□□□□ -0.31
HMGN1P10-201ENST00000474557 LCE2DQ5TA82 110 aaPredicted RBP13.1□□□□□ -0.31
HMGN1P10-201ENST00000474557 CSRNP3Q8WYN3 585 aa13.07□□□□□ -0.32
HMGN1P10-201ENST00000474557 CCDC61Q9Y6R9 512 aa13.06□□□□□ -0.32
HMGN1P10-201ENST00000474557 SEC24BO95487 1268 aa13.04□□□□□ -0.32
HMGN1P10-201ENST00000474557 KIF12Q96FN5 646 aa13.03□□□□□ -0.32
HMGN1P10-201ENST00000474557 PLEKHG5O94827 1062 aa13.02□□□□□ -0.33
HMGN1P10-201ENST00000474557 BMP2KQ9NSY1 1161 aaPredicted RBP13.02□□□□□ -0.33
HMGN1P10-201ENST00000474557 TIE1P35590 1138 aa13.01□□□□□ -0.33
HMGN1P10-201ENST00000474557 CDAN1Q8IWY9 1227 aa13.01□□□□□ -0.33
HMGN1P10-201ENST00000474557 POTEFA5A3E0 1075 aa12.94□□□□□ -0.34
HMGN1P10-201ENST00000474557 MAP3K13O43283 966 aa12.92□□□□□ -0.34
HMGN1P10-201ENST00000474557 IER5LQ5T953 404 aa12.89□□□□□ -0.35
HMGN1P10-201ENST00000474557 TTLL13PA6NNM8 815 aa12.88□□□□□ -0.35
HMGN1P10-201ENST00000474557 TRPC6Q9Y210 931 aa12.88□□□□□ -0.35
HMGN1P10-201ENST00000474557 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
HMGN1P10-201ENST00000474557 SLAIN1Q8ND83 568 aa12.84□□□□□ -0.35
HMGN1P10-201ENST00000474557 MIER1Q8N108 512 aa12.83□□□□□ -0.36
HMGN1P10-201ENST00000474557 SGIP1Q9BQI5 828 aa12.82□□□□□ -0.36
HMGN1P10-201ENST00000474557 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
HMGN1P10-201ENST00000474557 ST18O60284 1047 aa12.8□□□□□ -0.36
HMGN1P10-201ENST00000474557 RASEFQ8IZ41 740 aa12.78□□□□□ -0.36
HMGN1P10-201ENST00000474557 PROM2Q8N271 834 aa12.78□□□□□ -0.36
HMGN1P10-201ENST00000474557 PCDHB13Q9Y5F0 798 aa12.77□□□□□ -0.37
HMGN1P10-201ENST00000474557 PLCG2P16885 1265 aa12.75□□□□□ -0.37
HMGN1P10-201ENST00000474557 SNPHO15079 494 aa12.72□□□□□ -0.37
HMGN1P10-201ENST00000474557 TMEM121BQ9BXQ6 578 aaPredicted RBP12.72□□□□□ -0.37
HMGN1P10-201ENST00000474557 MMRN1Q13201 1228 aa12.7□□□□□ -0.38
HMGN1P10-201ENST00000474557 ZBTB47Q9UFB7 747 aaPredicted RBP12.7□□□□□ -0.38
HMGN1P10-201ENST00000474557 SPNS2Q8IVW8 549 aa12.67□□□□□ -0.38
HMGN1P10-201ENST00000474557 PLCD3Q8N3E9 789 aa12.67□□□□□ -0.38
HMGN1P10-201ENST00000474557 TMEM106CQ9BVX2 250 aa12.67□□□□□ -0.38
HMGN1P10-201ENST00000474557 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
HMGN1P10-201ENST00000474557 IFNL1Q8IU54 200 aa12.61□□□□□ -0.39
HMGN1P10-201ENST00000474557 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
HMGN1P10-201ENST00000474557 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.6□□□□□ -0.39
HMGN1P10-201ENST00000474557 IRX5P78411 483 aaPredicted RBP12.57□□□□□ -0.4
HMGN1P10-201ENST00000474557 OCEL1Q9H607 264 aa12.57□□□□□ -0.4
HMGN1P10-201ENST00000474557 NUBP1P53384 320 aa12.51□□□□□ -0.41
HMGN1P10-201ENST00000474557 MARVELD3Q96A59 401 aa12.51□□□□□ -0.41
HMGN1P10-201ENST00000474557 EMP3P54852 163 aa12.46□□□□□ -0.41
HMGN1P10-201ENST00000474557 C3orf67Q6ZVT6 689 aa12.44□□□□□ -0.42
HMGN1P10-201ENST00000474557 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
HMGN1P10-201ENST00000474557 DCAF8Q5TAQ9 597 aa12.38□□□□□ -0.43
HMGN1P10-201ENST00000474557 GOLGA2Q08379 1002 aa12.37□□□□□ -0.43
HMGN1P10-201ENST00000474557 PYGBP11216 843 aa12.34□□□□□ -0.43
HMGN1P10-201ENST00000474557 FAM205CA6NFA0 338 aa12.33□□□□□ -0.44
HMGN1P10-201ENST00000474557 MKRN3Q13064 507 aaKnown RBP12.33□□□□□ -0.44
HMGN1P10-201ENST00000474557 HS3ST6Q96QI5 342 aa12.33□□□□□ -0.44
HMGN1P10-201ENST00000474557 PCDHB8Q9UN66 801 aa12.3□□□□□ -0.44
HMGN1P10-201ENST00000474557 KRTAP3-3Q9BYR6 98 aa12.28□□□□□ -0.44
HMGN1P10-201ENST00000474557 KRTAP3-2Q9BYR7 98 aa12.28□□□□□ -0.44
HMGN1P10-201ENST00000474557 PDCD7Q8N8D1 485 aaKnown RBP12.26□□□□□ -0.45
HMGN1P10-201ENST00000474557 ZNF467Q7Z7K2 595 aaPredicted RBP12.25□□□□□ -0.45
HMGN1P10-201ENST00000474557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.22□□□□□ -0.45
HMGN1P10-201ENST00000474557 G3V3G9 751 aa12.2□□□□□ -0.46
HMGN1P10-201ENST00000474557 POTEB3A0JP26 581 aa12.19□□□□□ -0.46
HMGN1P10-201ENST00000474557 POTEBQ6S5H4 581 aa12.19□□□□□ -0.46
HMGN1P10-201ENST00000474557 GSE1Q14687 1217 aa12.16□□□□□ -0.46
HMGN1P10-201ENST00000474557 ZNF710Q8N1W2 664 aa12.16□□□□□ -0.46
HMGN1P10-201ENST00000474557 RNF166Q96A37 237 aaPredicted RBP12.12□□□□□ -0.47
HMGN1P10-201ENST00000474557 ERBB3P21860 1342 aa12.11□□□□□ -0.47
HMGN1P10-201ENST00000474557 DOK7Q18PE1 504 aa12.09□□□□□ -0.47
HMGN1P10-201ENST00000474557 PSEN1P49768 467 aa12.08□□□□□ -0.48
HMGN1P10-201ENST00000474557 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
HMGN1P10-201ENST00000474557 RIMBP2O15034 1052 aa12.07□□□□□ -0.48
HMGN1P10-201ENST00000474557 HOXB1P14653 301 aaPredicted RBP12.07□□□□□ -0.48
HMGN1P10-201ENST00000474557 CHRM1P11229 460 aaPredicted RBP12.05□□□□□ -0.48
HMGN1P10-201ENST00000474557 BOLA1Q9Y3E2 137 aa12.05□□□□□ -0.48
HMGN1P10-201ENST00000474557 HOXB3P14651 431 aaPredicted RBP12.04□□□□□ -0.48
HMGN1P10-201ENST00000474557 KLHL34Q8N239 644 aa12.04□□□□□ -0.48
HMGN1P10-201ENST00000474557 MYT1LQ9UL68 1186 aa12.04□□□□□ -0.48
HMGN1P10-201ENST00000474557 PDAP1Q13442 181 aaKnown RBP12.01□□□□□ -0.49
HMGN1P10-201ENST00000474557 ILDR1Q86SU0 546 aaPredicted RBP12□□□□□ -0.49
HMGN1P10-201ENST00000474557 FKBP8Q14318 412 aa11.99□□□□□ -0.49
HMGN1P10-201ENST00000474557 PTGER2P43116 358 aa11.98□□□□□ -0.49
HMGN1P10-201ENST00000474557 DPY19L2Q6NUT2 758 aa11.98□□□□□ -0.49
HMGN1P10-201ENST00000474557 VARS2Q5ST30 1063 aaKnown RBP11.96□□□□□ -0.49
HMGN1P10-201ENST00000474557 CABP2Q9NPB3 220 aa11.95□□□□□ -0.5
HMGN1P10-201ENST00000474557 ZSWIM6Q9HCJ5 1215 aa11.91□□□□□ -0.5
HMGN1P10-201ENST00000474557 ZNF687Q8N1G0 1237 aa11.9□□□□□ -0.5
HMGN1P10-201ENST00000474557 VASPP50552 380 aaPredicted RBP11.83□□□□□ -0.52
HMGN1P10-201ENST00000474557 ANKRD13DQ6ZTN6 518 aa11.79□□□□□ -0.52
HMGN1P10-201ENST00000474557 CIZ1Q9ULV3 898 aaPredicted RBP11.77□□□□□ -0.53
HMGN1P10-201ENST00000474557 GPR153Q6NV75 609 aa11.74□□□□□ -0.53
HMGN1P10-201ENST00000474557 MICALL2Q8IY33 904 aa11.71□□□□□ -0.53
HMGN1P10-201ENST00000474557 SPOCK2Q92563 424 aa11.7□□□□□ -0.54
HMGN1P10-201ENST00000474557 EFCAB3Q8N7B9 438 aa11.69□□□□□ -0.54
HMGN1P10-201ENST00000474557 LSM11P83369 360 aaKnown RBP eCLIP11.67□□□□□ -0.54
HMGN1P10-201ENST00000474557 PLA2G2EQ9NZK7 142 aa11.67□□□□□ -0.54
HMGN1P10-201ENST00000474557 ARSIQ5FYB1 569 aa11.66□□□□□ -0.54
HMGN1P10-201ENST00000474557 ZNF316A6NFI3 1004 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms