RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 POTEB2H3BUK9 544 aa15.55■□□□□ 0.08
SSB-210ENST00000474273 ATMINO43313 823 aaPredicted RBP15.52■□□□□ 0.08
SSB-210ENST00000474273 OTUD5Q96G74 571 aa15.51■□□□□ 0.07
SSB-210ENST00000474273 KIF12Q96FN5 646 aa15.49■□□□□ 0.07
SSB-210ENST00000474273 SLC39A7Q92504 469 aa15.47■□□□□ 0.07
SSB-210ENST00000474273 METRNQ9UJH8 293 aa15.47■□□□□ 0.07
SSB-210ENST00000474273 RASEFQ8IZ41 740 aa15.46■□□□□ 0.07
SSB-210ENST00000474273 C7P10643 843 aa15.45■□□□□ 0.06
SSB-210ENST00000474273 PLCD3Q8N3E9 789 aa15.44■□□□□ 0.06
SSB-210ENST00000474273 ATN1P54259 1190 aaPredicted RBP15.39■□□□□ 0.05
SSB-210ENST00000474273 MAP3K13O43283 966 aa15.38■□□□□ 0.05
SSB-210ENST00000474273 FKBP8Q14318 412 aa15.37■□□□□ 0.05
SSB-210ENST00000474273 ZBTB47Q9UFB7 747 aaPredicted RBP15.37■□□□□ 0.05
SSB-210ENST00000474273 BMP2KQ9NSY1 1161 aaPredicted RBP15.35■□□□□ 0.05
SSB-210ENST00000474273 TRPC6Q9Y210 931 aa15.34■□□□□ 0.05
SSB-210ENST00000474273 TIE1P35590 1138 aa15.33■□□□□ 0.04
SSB-210ENST00000474273 POTEJP0CG39 1038 aa15.3■□□□□ 0.04
SSB-210ENST00000474273 NUBP1P53384 320 aa15.3■□□□□ 0.04
SSB-210ENST00000474273 MAMSTRQ6ZN01 415 aa15.27■□□□□ 0.04
SSB-210ENST00000474273 SGIP1Q9BQI5 828 aa15.27■□□□□ 0.04
SSB-210ENST00000474273 POTEFA5A3E0 1075 aa15.22■□□□□ 0.03
SSB-210ENST00000474273 TTLL13PA6NNM8 815 aa15.22■□□□□ 0.03
SSB-210ENST00000474273 PCDHB13Q9Y5F0 798 aa15.21■□□□□ 0.03
SSB-210ENST00000474273 FAM212AQ96EL1 285 aa15.2■□□□□ 0.02
SSB-210ENST00000474273 SCUBE2Q9NQ36 999 aa15.17■□□□□ 0.02
SSB-210ENST00000474273 POTEMA6NI47 508 aa15.14■□□□□ 0.01
SSB-210ENST00000474273 IFNL1Q8IU54 200 aa15.12■□□□□ 0.01
SSB-210ENST00000474273 FBXO3Q9UK99 471 aa15.12■□□□□ 0.01
SSB-210ENST00000474273 TRIM35Q9UPQ4 493 aa15.12■□□□□ 0.01
SSB-210ENST00000474273 IER5LQ5T953 404 aa15.11■□□□□ 0.01
SSB-210ENST00000474273 PLSCR2Q9NRY7 297 aa15.11■□□□□ 0.01
SSB-210ENST00000474273 COLQQ9Y215 455 aaPredicted RBP15.11■□□□□ 0.01
SSB-210ENST00000474273 SEC24BO95487 1268 aa15.1■□□□□ 0.01
SSB-210ENST00000474273 POTEGQ6S5H5 508 aa15.1■□□□□ 0.01
SSB-210ENST00000474273 DCAF8Q5TAQ9 597 aa15.03■□□□□ -0
SSB-210ENST00000474273 TMEM106CQ9BVX2 250 aa15.03■□□□□ -0
SSB-210ENST00000474273 LCE2DQ5TA82 110 aaPredicted RBP14.99□□□□□ -0.01
SSB-210ENST00000474273 PYGBP11216 843 aa14.97□□□□□ -0.01
SSB-210ENST00000474273 FAM163AQ96GL9 167 aaPredicted RBP14.97□□□□□ -0.01
SSB-210ENST00000474273 PCDH10Q9P2E7 1040 aa14.95□□□□□ -0.02
SSB-210ENST00000474273 VASPP50552 380 aaPredicted RBP14.94□□□□□ -0.02
SSB-210ENST00000474273 PLCG2P16885 1265 aa14.91□□□□□ -0.02
SSB-210ENST00000474273 IRX5P78411 483 aaPredicted RBP14.89□□□□□ -0.03
SSB-210ENST00000474273 KLHL34Q8N239 644 aa14.89□□□□□ -0.03
SSB-210ENST00000474273 PCDHB8Q9UN66 801 aa14.88□□□□□ -0.03
SSB-210ENST00000474273 GSE1Q14687 1217 aa14.86□□□□□ -0.03
SSB-210ENST00000474273 SLAIN1Q8ND83 568 aa14.82□□□□□ -0.04
SSB-210ENST00000474273 OCEL1Q9H607 264 aa14.82□□□□□ -0.04
SSB-210ENST00000474273 ZNF467Q7Z7K2 595 aaPredicted RBP14.8□□□□□ -0.04
SSB-210ENST00000474273 CHRM1P11229 460 aaPredicted RBP14.77□□□□□ -0.05
SSB-210ENST00000474273 ST18O60284 1047 aa14.67□□□□□ -0.06
SSB-210ENST00000474273 GOLGA2Q08379 1002 aa14.66□□□□□ -0.06
SSB-210ENST00000474273 PDCD7Q8N8D1 485 aaKnown RBP14.66□□□□□ -0.06
SSB-210ENST00000474273 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.66□□□□□ -0.06
SSB-210ENST00000474273 PSEN1P49768 467 aa14.65□□□□□ -0.06
SSB-210ENST00000474273 MKRN3Q13064 507 aaKnown RBP14.65□□□□□ -0.06
SSB-210ENST00000474273 SPOCK2Q92563 424 aa14.65□□□□□ -0.06
SSB-210ENST00000474273 IFNLR1Q8IU57 520 aaPredicted RBP14.64□□□□□ -0.07
SSB-210ENST00000474273 CDAN1Q8IWY9 1227 aa14.61□□□□□ -0.07
SSB-210ENST00000474273 SNPHO15079 494 aa14.58□□□□□ -0.08
SSB-210ENST00000474273 PDAP1Q13442 181 aaKnown RBP14.58□□□□□ -0.08
SSB-210ENST00000474273 CIZ1Q9ULV3 898 aaPredicted RBP14.58□□□□□ -0.08
SSB-210ENST00000474273 L3MBTL3Q96JM7 780 aaPredicted RBP14.57□□□□□ -0.08
SSB-210ENST00000474273 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.57□□□□□ -0.081e-8■■■□□ 17.5
SSB-210ENST00000474273 TMEM121BQ9BXQ6 578 aaPredicted RBP14.55□□□□□ -0.08
SSB-210ENST00000474273 C3orf67Q6ZVT6 689 aa14.54□□□□□ -0.08
SSB-210ENST00000474273 ILDR1Q86SU0 546 aaPredicted RBP14.52□□□□□ -0.09
SSB-210ENST00000474273 CABP2Q9NPB3 220 aa14.47□□□□□ -0.09
SSB-210ENST00000474273 TRIM41Q8WV44 630 aa14.42□□□□□ -0.1
SSB-210ENST00000474273 DPY19L2Q6NUT2 758 aa14.41□□□□□ -0.1
SSB-210ENST00000474273 MARVELD3Q96A59 401 aa14.4□□□□□ -0.1
SSB-210ENST00000474273 BOLA1Q9Y3E2 137 aa14.36□□□□□ -0.11
SSB-210ENST00000474273 G3V3G9 751 aa14.34□□□□□ -0.11
SSB-210ENST00000474273 EMP3P54852 163 aa14.31□□□□□ -0.12
SSB-210ENST00000474273 EFCAB3Q8N7B9 438 aa14.28□□□□□ -0.12
SSB-210ENST00000474273 SPNS2Q8IVW8 549 aa14.27□□□□□ -0.13
SSB-210ENST00000474273 MMRN1Q13201 1228 aa14.23□□□□□ -0.13
SSB-210ENST00000474273 HOXB3P14651 431 aaPredicted RBP14.22□□□□□ -0.13
SSB-210ENST00000474273 HS3ST6Q96QI5 342 aa14.22□□□□□ -0.13
SSB-210ENST00000474273 RIOK3O14730 519 aaKnown RBP14.21□□□□□ -0.13
SSB-210ENST00000474273 FAM205CA6NFA0 338 aa14.2□□□□□ -0.14
SSB-210ENST00000474273 RNF25Q96BH1 459 aaPredicted RBP14.2□□□□□ -0.14
SSB-210ENST00000474273 POTEB3A0JP26 581 aa14.19□□□□□ -0.14
SSB-210ENST00000474273 POTEBQ6S5H4 581 aa14.19□□□□□ -0.14
SSB-210ENST00000474273 SOX12O15370 315 aa14.16□□□□□ -0.14
SSB-210ENST00000474273 VGFO15240 615 aaPredicted RBP14.15□□□□□ -0.14
SSB-210ENST00000474273 KRTAP3-3Q9BYR6 98 aa14.15□□□□□ -0.14
SSB-210ENST00000474273 KRTAP3-2Q9BYR7 98 aa14.15□□□□□ -0.14
SSB-210ENST00000474273 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.14□□□□□ -0.15
SSB-210ENST00000474273 DOK7Q18PE1 504 aa14.14□□□□□ -0.15
SSB-210ENST00000474273 ZNF710Q8N1W2 664 aa14.14□□□□□ -0.15
SSB-210ENST00000474273 ZFP91Q96JP5 570 aaPredicted RBP14.14□□□□□ -0.15
SSB-210ENST00000474273 HOXB1P14653 301 aaPredicted RBP14.13□□□□□ -0.15
SSB-210ENST00000474273 MICALL2Q8IY33 904 aa14.13□□□□□ -0.15
SSB-210ENST00000474273 MS4A4AQ96JQ5 239 aa14.09□□□□□ -0.15
SSB-210ENST00000474273 TMEM92Q6UXU6 159 aa14.07□□□□□ -0.16
SSB-210ENST00000474273 PHF8Q9UPP1 1060 aa14.07□□□□□ -0.16
SSB-210ENST00000474273 RIMBP2O15034 1052 aa14.06□□□□□ -0.16
SSB-210ENST00000474273 ERBB3P21860 1342 aa14.02□□□□□ -0.17
SSB-210ENST00000474273 ZSWIM6Q9HCJ5 1215 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms