RNA–Protein interactions for RNA: ENST00000474226.1

UFD1-207, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-207ENST00000474226 PHF12Q96QT6 1004 aa12.56□□□□□ -0.4
UFD1-207ENST00000474226 CCDC61Q9Y6R9 512 aa12.53□□□□□ -0.4
UFD1-207ENST00000474226 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
UFD1-207ENST00000474226 SPOCK2Q92563 424 aa12.48□□□□□ -0.41
UFD1-207ENST00000474226 DCAF8Q5TAQ9 597 aa12.47□□□□□ -0.41
UFD1-207ENST00000474226 GALR2O43603 387 aaPredicted RBP12.45□□□□□ -0.42
UFD1-207ENST00000474226 KIF12Q96FN5 646 aa12.42□□□□□ -0.42
UFD1-207ENST00000474226 GSE1Q14687 1217 aa12.41□□□□□ -0.42
UFD1-207ENST00000474226 MS4A3Q96HJ5 214 aa12.4□□□□□ -0.42
UFD1-207ENST00000474226 MAP3K13O43283 966 aa12.39□□□□□ -0.43
UFD1-207ENST00000474226 DCBLD2Q96PD2 775 aa12.38□□□□□ -0.43
UFD1-207ENST00000474226 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
UFD1-207ENST00000474226 PYGBP11216 843 aa12.34□□□□□ -0.43
UFD1-207ENST00000474226 PCDHB13Q9Y5F0 798 aa12.33□□□□□ -0.44
UFD1-207ENST00000474226 POTEIP0CG38 1075 aa12.32□□□□□ -0.44
UFD1-207ENST00000474226 SGIP1Q9BQI5 828 aa12.31□□□□□ -0.44
UFD1-207ENST00000474226 IFNL1Q8IU54 200 aa12.26□□□□□ -0.45
UFD1-207ENST00000474226 CHRM1P11229 460 aaPredicted RBP12.24□□□□□ -0.45
UFD1-207ENST00000474226 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
UFD1-207ENST00000474226 ATMINO43313 823 aaPredicted RBP12.21□□□□□ -0.45
UFD1-207ENST00000474226 ASTLQ6HA08 431 aaPredicted RBP12.21□□□□□ -0.45
UFD1-207ENST00000474226 TIE1P35590 1138 aa12.2□□□□□ -0.46
UFD1-207ENST00000474226 BMP2KQ9NSY1 1161 aaPredicted RBP12.19□□□□□ -0.46
UFD1-207ENST00000474226 PCDHB8Q9UN66 801 aa12.19□□□□□ -0.46
UFD1-207ENST00000474226 ZNF467Q7Z7K2 595 aaPredicted RBP12.18□□□□□ -0.46
UFD1-207ENST00000474226 TRIM41Q8WV44 630 aa12.18□□□□□ -0.46
UFD1-207ENST00000474226 ATN1P54259 1190 aaPredicted RBP12.16□□□□□ -0.46
UFD1-207ENST00000474226 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
UFD1-207ENST00000474226 TTLL13PA6NNM8 815 aa12.15□□□□□ -0.46
UFD1-207ENST00000474226 TMEM106CQ9BVX2 250 aa12.13□□□□□ -0.47
UFD1-207ENST00000474226 SLC39A7Q92504 469 aa12.09□□□□□ -0.47
UFD1-207ENST00000474226 TRIM35Q9UPQ4 493 aa12.08□□□□□ -0.48
UFD1-207ENST00000474226 C7P10643 843 aa12.07□□□□□ -0.48
UFD1-207ENST00000474226 METRNQ9UJH8 293 aa12.07□□□□□ -0.48
UFD1-207ENST00000474226 PSEN1P49768 467 aa12.05□□□□□ -0.48
UFD1-207ENST00000474226 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
UFD1-207ENST00000474226 PKD2Q13563 968 aa12.04□□□□□ -0.48
UFD1-207ENST00000474226 LHX8Q68G74 356 aa12.04□□□□□ -0.48
UFD1-207ENST00000474226 ECM2O94769 699 aaPredicted RBP12.03□□□□□ -0.48
UFD1-207ENST00000474226 RNF25Q96BH1 459 aaPredicted RBP12.01□□□□□ -0.49
UFD1-207ENST00000474226 RIOK3O14730 519 aaKnown RBP12□□□□□ -0.49
UFD1-207ENST00000474226 IER5LQ5T953 404 aa11.99□□□□□ -0.49
UFD1-207ENST00000474226 SEC24BO95487 1268 aa11.97□□□□□ -0.49
UFD1-207ENST00000474226 GOLGA2Q08379 1002 aa11.97□□□□□ -0.49
UFD1-207ENST00000474226 VGFO15240 615 aaPredicted RBP11.94□□□□□ -0.5
UFD1-207ENST00000474226 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
UFD1-207ENST00000474226 POTEB2H3BUK9 544 aa11.93□□□□□ -0.5
UFD1-207ENST00000474226 COLQQ9Y215 455 aaPredicted RBP11.92□□□□□ -0.5
UFD1-207ENST00000474226 RGL2O15211 777 aa11.91□□□□□ -0.5
UFD1-207ENST00000474226 MKRN3Q13064 507 aaKnown RBP11.91□□□□□ -0.5
UFD1-207ENST00000474226 CABP2Q9NPB3 220 aa11.91□□□□□ -0.5
UFD1-207ENST00000474226 TAOK2Q9UL54 1235 aa11.91□□□□□ -0.5
UFD1-207ENST00000474226 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.9□□□□□ -0.5
UFD1-207ENST00000474226 ZFP91Q96JP5 570 aaPredicted RBP11.9□□□□□ -0.5
UFD1-207ENST00000474226 PLCG2P16885 1265 aa11.89□□□□□ -0.51
UFD1-207ENST00000474226 IRX5P78411 483 aaPredicted RBP11.89□□□□□ -0.51
UFD1-207ENST00000474226 OCEL1Q9H607 264 aa11.86□□□□□ -0.51
UFD1-207ENST00000474226 POTEJP0CG39 1038 aa11.83□□□□□ -0.52
UFD1-207ENST00000474226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.83□□□□□ -0.52
UFD1-207ENST00000474226 EFCAB3Q8N7B9 438 aa11.81□□□□□ -0.52
UFD1-207ENST00000474226 BCL11BQ9C0K0 894 aaPredicted RBP11.81□□□□□ -0.52
UFD1-207ENST00000474226 STK25O00506 426 aa11.8□□□□□ -0.52
UFD1-207ENST00000474226 MAMSTRQ6ZN01 415 aa11.8□□□□□ -0.52
UFD1-207ENST00000474226 OTUD5Q96G74 571 aa11.8□□□□□ -0.52
UFD1-207ENST00000474226 STK24Q9Y6E0 443 aa11.79□□□□□ -0.52
UFD1-207ENST00000474226 PDCD7Q8N8D1 485 aaKnown RBP11.78□□□□□ -0.52
UFD1-207ENST00000474226 SCUBE2Q9NQ36 999 aa11.77□□□□□ -0.53
UFD1-207ENST00000474226 ILDR1Q86SU0 546 aaPredicted RBP11.75□□□□□ -0.53
UFD1-207ENST00000474226 SOX12O15370 315 aa11.73□□□□□ -0.53
UFD1-207ENST00000474226 DPY19L2Q6NUT2 758 aa11.7□□□□□ -0.54
UFD1-207ENST00000474226 L3MBTL3Q96JM7 780 aaPredicted RBP11.7□□□□□ -0.54
UFD1-207ENST00000474226 AMER1Q5JTC6 1135 aaPredicted RBP11.68□□□□□ -0.54
UFD1-207ENST00000474226 PHF8Q9UPP1 1060 aa11.68□□□□□ -0.54
UFD1-207ENST00000474226 CHGAP10645 457 aaKnown RBP11.67□□□□□ -0.54
UFD1-207ENST00000474226 HS6ST3Q8IZP7 471 aa11.66□□□□□ -0.54
UFD1-207ENST00000474226 DCAF8L2P0C7V8 631 aa11.65□□□□□ -0.54
UFD1-207ENST00000474226 G3V3G9 751 aa11.64□□□□□ -0.55
UFD1-207ENST00000474226 NLRP6P59044 892 aa11.64□□□□□ -0.55
UFD1-207ENST00000474226 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
UFD1-207ENST00000474226 BOLA1Q9Y3E2 137 aa11.63□□□□□ -0.55
UFD1-207ENST00000474226 C3orf67Q6ZVT6 689 aa11.62□□□□□ -0.55
UFD1-207ENST00000474226 MS4A4AQ96JQ5 239 aa11.62□□□□□ -0.55
UFD1-207ENST00000474226 MFRPQ9BY79 579 aa11.62□□□□□ -0.55
UFD1-207ENST00000474226 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.62□□□□□ -0.55
UFD1-207ENST00000474226 SLAIN1Q8ND83 568 aa11.61□□□□□ -0.55
UFD1-207ENST00000474226 FBXO22Q8NEZ5 403 aa11.61□□□□□ -0.55
UFD1-207ENST00000474226 MICALL2Q8IY33 904 aa11.54□□□□□ -0.56
UFD1-207ENST00000474226 TMEM121BQ9BXQ6 578 aaPredicted RBP11.54□□□□□ -0.56
UFD1-207ENST00000474226 DNAJC5Q9H3Z4 198 aa11.52□□□□□ -0.57
UFD1-207ENST00000474226 NKX1-1Q15270 411 aaPredicted RBP11.49□□□□□ -0.57
UFD1-207ENST00000474226 FAM163AQ96GL9 167 aaPredicted RBP11.45□□□□□ -0.58
UFD1-207ENST00000474226 PPP1R37O75864 691 aa11.44□□□□□ -0.58
UFD1-207ENST00000474226 RYDENQ9NUL5 291 aaKnown RBP11.44□□□□□ -0.58
UFD1-207ENST00000474226 SNPHO15079 494 aa11.42□□□□□ -0.58
UFD1-207ENST00000474226 TMEM92Q6UXU6 159 aa11.4□□□□□ -0.58
UFD1-207ENST00000474226 LCE2DQ5TA82 110 aaPredicted RBP11.37□□□□□ -0.59
UFD1-207ENST00000474226 GTPBP6O43824 516 aaPredicted RBP11.36□□□□□ -0.59
UFD1-207ENST00000474226 ST18O60284 1047 aa11.34□□□□□ -0.59
UFD1-207ENST00000474226 BBXQ8WY36 941 aaPredicted RBP11.34□□□□□ -0.59
UFD1-207ENST00000474226 POTEMA6NI47 508 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms