RNA–Protein interactions for RNA: ENST00000474202.1

LRRK2-205, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 4

Gene LRRK2, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-205ENST00000474202 ZNF579Q8NAF0 562 aaKnown RBP17.47■□□□□ 0.39
LRRK2-205ENST00000474202 DCAF8Q5TAQ9 597 aa17.46■□□□□ 0.39
LRRK2-205ENST00000474202 GSE1Q14687 1217 aa17.45■□□□□ 0.38
LRRK2-205ENST00000474202 CCDC61Q9Y6R9 512 aa17.4■□□□□ 0.38
LRRK2-205ENST00000474202 CIZ1Q9ULV3 898 aaPredicted RBP17.35■□□□□ 0.37
LRRK2-205ENST00000474202 PHF12Q96QT6 1004 aa17.34■□□□□ 0.37
LRRK2-205ENST00000474202 GABBR2O75899 941 aa17.3■□□□□ 0.36
LRRK2-205ENST00000474202 KIF12Q96FN5 646 aa17.25■□□□□ 0.35
LRRK2-205ENST00000474202 TRIM41Q8WV44 630 aa17.23■□□□□ 0.35
LRRK2-205ENST00000474202 PYGBP11216 843 aa17.21■□□□□ 0.35
LRRK2-205ENST00000474202 AMER1Q5JTC6 1135 aaPredicted RBP17.21■□□□□ 0.35
LRRK2-205ENST00000474202 SGIP1Q9BQI5 828 aa17.21■□□□□ 0.35
LRRK2-205ENST00000474202 MAP3K13O43283 966 aa17.18■□□□□ 0.34
LRRK2-205ENST00000474202 PKD2Q13563 968 aa17.18■□□□□ 0.34
LRRK2-205ENST00000474202 RTN4Q9NQC3 1192 aaKnown RBP17.18■□□□□ 0.34
LRRK2-205ENST00000474202 CHRM1P11229 460 aaPredicted RBP17.17■□□□□ 0.34
LRRK2-205ENST00000474202 PCDHB13Q9Y5F0 798 aa17.16■□□□□ 0.34
LRRK2-205ENST00000474202 GALR2O43603 387 aaPredicted RBP17.15■□□□□ 0.34
LRRK2-205ENST00000474202 MS4A3Q96HJ5 214 aa17.14■□□□□ 0.33
LRRK2-205ENST00000474202 DCBLD2Q96PD2 775 aa17.09■□□□□ 0.33
LRRK2-205ENST00000474202 ZNF467Q7Z7K2 595 aaPredicted RBP17.07■□□□□ 0.32
LRRK2-205ENST00000474202 ECM2O94769 699 aaPredicted RBP17.06■□□□□ 0.32
LRRK2-205ENST00000474202 IFNL1Q8IU54 200 aa17.03■□□□□ 0.32
LRRK2-205ENST00000474202 TIE1P35590 1138 aa16.96■□□□□ 0.31
LRRK2-205ENST00000474202 PCDHB8Q9UN66 801 aa16.96■□□□□ 0.31
LRRK2-205ENST00000474202 RGL2O15211 777 aa16.91■□□□□ 0.3
LRRK2-205ENST00000474202 RNF25Q96BH1 459 aaPredicted RBP16.91■□□□□ 0.3
LRRK2-205ENST00000474202 TAOK2Q9UL54 1235 aa16.9■□□□□ 0.3
LRRK2-205ENST00000474202 RIOK3O14730 519 aaKnown RBP16.89■□□□□ 0.29
LRRK2-205ENST00000474202 ASTLQ6HA08 431 aaPredicted RBP16.89■□□□□ 0.29
LRRK2-205ENST00000474202 BMP2KQ9NSY1 1161 aaPredicted RBP16.88■□□□□ 0.29
LRRK2-205ENST00000474202 TRPC6Q9Y210 931 aa16.88■□□□□ 0.29
LRRK2-205ENST00000474202 PDAP1Q13442 181 aaKnown RBP16.87■□□□□ 0.29
LRRK2-205ENST00000474202 ATMINO43313 823 aaPredicted RBP16.86■□□□□ 0.29
LRRK2-205ENST00000474202 POTEIP0CG38 1075 aa16.86■□□□□ 0.29
LRRK2-205ENST00000474202 TMEM106CQ9BVX2 250 aa16.86■□□□□ 0.29
LRRK2-205ENST00000474202 TTLL13PA6NNM8 815 aa16.84■□□□□ 0.29
LRRK2-205ENST00000474202 PSEN1P49768 467 aa16.83■□□□□ 0.28
LRRK2-205ENST00000474202 VGFO15240 615 aaPredicted RBP16.81■□□□□ 0.28
LRRK2-205ENST00000474202 ATN1P54259 1190 aaPredicted RBP16.79■□□□□ 0.28
LRRK2-205ENST00000474202 SLC39A7Q92504 469 aa16.75■□□□□ 0.27
LRRK2-205ENST00000474202 TRIM35Q9UPQ4 493 aa16.75■□□□□ 0.27
LRRK2-205ENST00000474202 GOLGA2Q08379 1002 aa16.73■□□□□ 0.27
LRRK2-205ENST00000474202 C7P10643 843 aa16.71■□□□□ 0.27
LRRK2-205ENST00000474202 DCAF8L2P0C7V8 631 aa16.7■□□□□ 0.26
LRRK2-205ENST00000474202 PELP1Q8IZL8 1130 aaKnown RBP16.7■□□□□ 0.26
LRRK2-205ENST00000474202 IER5LQ5T953 404 aa16.68■□□□□ 0.26
LRRK2-205ENST00000474202 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.67■□□□□ 0.26
LRRK2-205ENST00000474202 ZFP91Q96JP5 570 aaPredicted RBP16.67■□□□□ 0.26
LRRK2-205ENST00000474202 METRNQ9UJH8 293 aa16.65■□□□□ 0.26
LRRK2-205ENST00000474202 MKRN3Q13064 507 aaKnown RBP16.64■□□□□ 0.25
LRRK2-205ENST00000474202 CABP2Q9NPB3 220 aa16.62■□□□□ 0.25
LRRK2-205ENST00000474202 STK25O00506 426 aa16.6■□□□□ 0.25
LRRK2-205ENST00000474202 SEC24BO95487 1268 aa16.6■□□□□ 0.25
LRRK2-205ENST00000474202 BCL11BQ9C0K0 894 aaPredicted RBP16.59■□□□□ 0.25
LRRK2-205ENST00000474202 STK24Q9Y6E0 443 aa16.57■□□□□ 0.24
LRRK2-205ENST00000474202 CHGAP10645 457 aaKnown RBP16.56■□□□□ 0.24
LRRK2-205ENST00000474202 HS6ST3Q8IZP7 471 aa16.54■□□□□ 0.24
LRRK2-205ENST00000474202 PLCG2P16885 1265 aa16.53■□□□□ 0.24
LRRK2-205ENST00000474202 OCEL1Q9H607 264 aa16.49■□□□□ 0.23
LRRK2-205ENST00000474202 IRX5P78411 483 aaPredicted RBP16.48■□□□□ 0.23
LRRK2-205ENST00000474202 EFCAB3Q8N7B9 438 aa16.48■□□□□ 0.23
LRRK2-205ENST00000474202 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.48■□□□□ 0.23
LRRK2-205ENST00000474202 SOX12O15370 315 aa16.46■□□□□ 0.23
LRRK2-205ENST00000474202 LHX8Q68G74 356 aa16.45■□□□□ 0.22
LRRK2-205ENST00000474202 COLQQ9Y215 455 aaPredicted RBP16.44■□□□□ 0.22
LRRK2-205ENST00000474202 POTEFA5A3E0 1075 aa16.4■□□□□ 0.22
LRRK2-205ENST00000474202 DNAJC5Q9H3Z4 198 aa16.39■□□□□ 0.21
LRRK2-205ENST00000474202 ILDR1Q86SU0 546 aaPredicted RBP16.36■□□□□ 0.21
LRRK2-205ENST00000474202 NLRP6P59044 892 aa16.35■□□□□ 0.21
LRRK2-205ENST00000474202 PDCD7Q8N8D1 485 aaKnown RBP16.35■□□□□ 0.21
LRRK2-205ENST00000474202 MAMSTRQ6ZN01 415 aa16.34■□□□□ 0.21
LRRK2-205ENST00000474202 NKX1-1Q15270 411 aaPredicted RBP16.32■□□□□ 0.2
LRRK2-205ENST00000474202 BBXQ8WY36 941 aaPredicted RBP16.32■□□□□ 0.2
LRRK2-205ENST00000474202 L3MBTL3Q96JM7 780 aaPredicted RBP16.32■□□□□ 0.2
LRRK2-205ENST00000474202 POTEB2H3BUK9 544 aa16.31■□□□□ 0.2
LRRK2-205ENST00000474202 PHF8Q9UPP1 1060 aa16.31■□□□□ 0.2
LRRK2-205ENST00000474202 G3V3G9 751 aa16.3■□□□□ 0.2
LRRK2-205ENST00000474202 MFRPQ9BY79 579 aa16.27■□□□□ 0.2
LRRK2-205ENST00000474202 SCUBE2Q9NQ36 999 aa16.27■□□□□ 0.2
LRRK2-205ENST00000474202 RYDENQ9NUL5 291 aaKnown RBP16.27■□□□□ 0.2
LRRK2-205ENST00000474202 FBXO22Q8NEZ5 403 aa16.23■□□□□ 0.19
LRRK2-205ENST00000474202 DPY19L2Q6NUT2 758 aa16.21■□□□□ 0.19
LRRK2-205ENST00000474202 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.2■□□□□ 0.18
LRRK2-205ENST00000474202 BOLA1Q9Y3E2 137 aa16.2■□□□□ 0.18
LRRK2-205ENST00000474202 POTEJP0CG39 1038 aa16.19■□□□□ 0.18
LRRK2-205ENST00000474202 MS4A4AQ96JQ5 239 aa16.19■□□□□ 0.18
LRRK2-205ENST00000474202 C3orf67Q6ZVT6 689 aa16.17■□□□□ 0.18
LRRK2-205ENST00000474202 GTPBP6O43824 516 aaPredicted RBP16.16■□□□□ 0.18
LRRK2-205ENST00000474202 OTUD5Q96G74 571 aa16.15■□□□□ 0.18
LRRK2-205ENST00000474202 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.14■□□□□ 0.17
LRRK2-205ENST00000474202 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
LRRK2-205ENST00000474202 SPRYD3Q8NCJ5 442 aa16.09■□□□□ 0.17
LRRK2-205ENST00000474202 MICALL2Q8IY33 904 aa16.08■□□□□ 0.16
LRRK2-205ENST00000474202 TMEM121BQ9BXQ6 578 aaPredicted RBP16.08■□□□□ 0.16
LRRK2-205ENST00000474202 CFAP44Q96MT7 982 aa16.07■□□□□ 0.16
LRRK2-205ENST00000474202 PPP1R37O75864 691 aa16.05■□□□□ 0.16
LRRK2-205ENST00000474202 SLAIN1Q8ND83 568 aa16.04■□□□□ 0.16
LRRK2-205ENST00000474202 PLCB2Q00722 1185 aa16■□□□□ 0.15
LRRK2-205ENST00000474202 SNPHO15079 494 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms