RNA–Protein interactions for RNA: ENST00000473824.1

UBE2D1-202, Transcript of ubiquitin conjugating enzyme E2 D1, humanhuman

TSL 2

Gene UBE2D1, Length 839 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D1-202ENST00000473824 EVX2Q03828 476 aa15.6■□□□□ 0.09
UBE2D1-202ENST00000473824 CCDC61Q9Y6R9 512 aa15.59■□□□□ 0.09
UBE2D1-202ENST00000473824 ZNF579Q8NAF0 562 aaKnown RBP15.58■□□□□ 0.08
UBE2D1-202ENST00000473824 TRIM41Q8WV44 630 aa15.53■□□□□ 0.08
UBE2D1-202ENST00000473824 CLCN6P51797 869 aa15.5■□□□□ 0.07
UBE2D1-202ENST00000473824 PHF12Q96QT6 1004 aa15.5■□□□□ 0.07
UBE2D1-202ENST00000473824 AMER1Q5JTC6 1135 aaPredicted RBP15.48■□□□□ 0.07
UBE2D1-202ENST00000473824 SP7Q8TDD2 431 aaPredicted RBP15.48■□□□□ 0.07
UBE2D1-202ENST00000473824 PYGBP11216 843 aa15.47■□□□□ 0.07
UBE2D1-202ENST00000473824 KIF12Q96FN5 646 aa15.44■□□□□ 0.06
UBE2D1-202ENST00000473824 CHRM1P11229 460 aaPredicted RBP15.43■□□□□ 0.06
UBE2D1-202ENST00000473824 PKD2Q13563 968 aa15.43■□□□□ 0.06
UBE2D1-202ENST00000473824 ECM2O94769 699 aaPredicted RBP15.4■□□□□ 0.06
UBE2D1-202ENST00000473824 SGIP1Q9BQI5 828 aa15.4■□□□□ 0.06
UBE2D1-202ENST00000473824 MAP3K13O43283 966 aa15.39■□□□□ 0.05
UBE2D1-202ENST00000473824 GABBR2O75899 941 aa15.37■□□□□ 0.05
UBE2D1-202ENST00000473824 PCDHB13Q9Y5F0 798 aa15.37■□□□□ 0.05
UBE2D1-202ENST00000473824 RTN4Q9NQC3 1192 aaKnown RBP15.34■□□□□ 0.05
UBE2D1-202ENST00000473824 ZNF467Q7Z7K2 595 aaPredicted RBP15.33■□□□□ 0.04
UBE2D1-202ENST00000473824 MS4A3Q96HJ5 214 aa15.33■□□□□ 0.04
UBE2D1-202ENST00000473824 GALR2O43603 387 aaPredicted RBP15.3■□□□□ 0.04
UBE2D1-202ENST00000473824 IFNL1Q8IU54 200 aa15.28■□□□□ 0.04
UBE2D1-202ENST00000473824 PCDHB8Q9UN66 801 aa15.24■□□□□ 0.03
UBE2D1-202ENST00000473824 RIOK3O14730 519 aaKnown RBP15.23■□□□□ 0.03
UBE2D1-202ENST00000473824 RNF25Q96BH1 459 aaPredicted RBP15.21■□□□□ 0.03
UBE2D1-202ENST00000473824 TAOK2Q9UL54 1235 aa15.21■□□□□ 0.03
UBE2D1-202ENST00000473824 RGL2O15211 777 aa15.2■□□□□ 0.02
UBE2D1-202ENST00000473824 DCBLD2Q96PD2 775 aa15.18■□□□□ 0.02
UBE2D1-202ENST00000473824 PDAP1Q13442 181 aaKnown RBP15.17■□□□□ 0.02
UBE2D1-202ENST00000473824 VGFO15240 615 aaPredicted RBP15.16■□□□□ 0.02
UBE2D1-202ENST00000473824 TIE1P35590 1138 aa15.16■□□□□ 0.02
UBE2D1-202ENST00000473824 TRPC6Q9Y210 931 aa15.14■□□□□ 0.01
UBE2D1-202ENST00000473824 PSEN1P49768 467 aa15.12■□□□□ 0.01
UBE2D1-202ENST00000473824 TMEM106CQ9BVX2 250 aa15.09■□□□□ 0.01
UBE2D1-202ENST00000473824 BMP2KQ9NSY1 1161 aaPredicted RBP15.09■□□□□ 0.01
UBE2D1-202ENST00000473824 DCAF8L2P0C7V8 631 aa15.08■□□□□ 0
UBE2D1-202ENST00000473824 TTLL13PA6NNM8 815 aa15.07■□□□□ 0
UBE2D1-202ENST00000473824 ASTLQ6HA08 431 aaPredicted RBP15.06■□□□□ 0
UBE2D1-202ENST00000473824 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.05■□□□□ -0
UBE2D1-202ENST00000473824 ZFP91Q96JP5 570 aaPredicted RBP15.05■□□□□ -0
UBE2D1-202ENST00000473824 ATMINO43313 823 aaPredicted RBP15.04■□□□□ -0
UBE2D1-202ENST00000473824 POTEIP0CG38 1075 aa15□□□□□ -0.01
UBE2D1-202ENST00000473824 ATN1P54259 1190 aaPredicted RBP15□□□□□ -0.01
UBE2D1-202ENST00000473824 STK25O00506 426 aa14.99□□□□□ -0.01
UBE2D1-202ENST00000473824 GOLGA2Q08379 1002 aa14.98□□□□□ -0.01
UBE2D1-202ENST00000473824 TRIM35Q9UPQ4 493 aa14.98□□□□□ -0.01
UBE2D1-202ENST00000473824 BCL11BQ9C0K0 894 aaPredicted RBP14.97□□□□□ -0.01
UBE2D1-202ENST00000473824 STK24Q9Y6E0 443 aa14.95□□□□□ -0.02
UBE2D1-202ENST00000473824 CHGAP10645 457 aaKnown RBP14.94□□□□□ -0.02
UBE2D1-202ENST00000473824 CABP2Q9NPB3 220 aa14.94□□□□□ -0.02
UBE2D1-202ENST00000473824 HS6ST3Q8IZP7 471 aa14.93□□□□□ -0.02
UBE2D1-202ENST00000473824 MKRN3Q13064 507 aaKnown RBP14.9□□□□□ -0.02
UBE2D1-202ENST00000473824 PELP1Q8IZL8 1130 aaKnown RBP14.9□□□□□ -0.02
UBE2D1-202ENST00000473824 SLC39A7Q92504 469 aa14.9□□□□□ -0.02
UBE2D1-202ENST00000473824 IER5LQ5T953 404 aa14.89□□□□□ -0.03
UBE2D1-202ENST00000473824 C7P10643 843 aa14.86□□□□□ -0.03
UBE2D1-202ENST00000473824 EFCAB3Q8N7B9 438 aa14.83□□□□□ -0.04
UBE2D1-202ENST00000473824 METRNQ9UJH8 293 aa14.83□□□□□ -0.04
UBE2D1-202ENST00000473824 SOX12O15370 315 aa14.79□□□□□ -0.04
UBE2D1-202ENST00000473824 SEC24BO95487 1268 aa14.79□□□□□ -0.04
UBE2D1-202ENST00000473824 DNAJC5Q9H3Z4 198 aa14.78□□□□□ -0.04
UBE2D1-202ENST00000473824 PLCG2P16885 1265 aa14.76□□□□□ -0.05
UBE2D1-202ENST00000473824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.76□□□□□ -0.05
UBE2D1-202ENST00000473824 IRX5P78411 483 aaPredicted RBP14.75□□□□□ -0.05
UBE2D1-202ENST00000473824 OCEL1Q9H607 264 aa14.74□□□□□ -0.05
UBE2D1-202ENST00000473824 NLRP6P59044 892 aa14.71□□□□□ -0.05
UBE2D1-202ENST00000473824 BBXQ8WY36 941 aaPredicted RBP14.71□□□□□ -0.05
UBE2D1-202ENST00000473824 ILDR1Q86SU0 546 aaPredicted RBP14.69□□□□□ -0.06
UBE2D1-202ENST00000473824 PHF8Q9UPP1 1060 aa14.69□□□□□ -0.06
UBE2D1-202ENST00000473824 COLQQ9Y215 455 aaPredicted RBP14.69□□□□□ -0.06
UBE2D1-202ENST00000473824 MFRPQ9BY79 579 aa14.68□□□□□ -0.06
UBE2D1-202ENST00000473824 RYDENQ9NUL5 291 aaKnown RBP14.68□□□□□ -0.06
UBE2D1-202ENST00000473824 POTEFA5A3E0 1075 aa14.66□□□□□ -0.06
UBE2D1-202ENST00000473824 NKX1-1Q15270 411 aaPredicted RBP14.66□□□□□ -0.06
UBE2D1-202ENST00000473824 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.66□□□□□ -0.06
UBE2D1-202ENST00000473824 PDCD7Q8N8D1 485 aaKnown RBP14.65□□□□□ -0.06
UBE2D1-202ENST00000473824 FBXO22Q8NEZ5 403 aa14.63□□□□□ -0.07
UBE2D1-202ENST00000473824 MS4A4AQ96JQ5 239 aa14.59□□□□□ -0.07
UBE2D1-202ENST00000473824 L3MBTL3Q96JM7 780 aaPredicted RBP14.58□□□□□ -0.08
UBE2D1-202ENST00000473824 G3V3G9 751 aa14.56□□□□□ -0.08
UBE2D1-202ENST00000473824 DPY19L2Q6NUT2 758 aa14.55□□□□□ -0.08
UBE2D1-202ENST00000473824 GTPBP6O43824 516 aaPredicted RBP14.53□□□□□ -0.08
UBE2D1-202ENST00000473824 LHX8Q68G74 356 aa14.53□□□□□ -0.08
UBE2D1-202ENST00000473824 POTEB2H3BUK9 544 aa14.52□□□□□ -0.09
UBE2D1-202ENST00000473824 SPRYD3Q8NCJ5 442 aa14.52□□□□□ -0.09
UBE2D1-202ENST00000473824 BOLA1Q9Y3E2 137 aa14.5□□□□□ -0.09
UBE2D1-202ENST00000473824 MAMSTRQ6ZN01 415 aa14.49□□□□□ -0.09
UBE2D1-202ENST00000473824 PAXIP1Q6ZW49 1069 aaPredicted RBP14.48□□□□□ -0.09
UBE2D1-202ENST00000473824 CFAP44Q96MT7 982 aa14.46□□□□□ -0.09
UBE2D1-202ENST00000473824 SCUBE2Q9NQ36 999 aa14.45□□□□□ -0.1
UBE2D1-202ENST00000473824 PPP1R37O75864 691 aa14.44□□□□□ -0.1
UBE2D1-202ENST00000473824 C3orf67Q6ZVT6 689 aa14.44□□□□□ -0.1
UBE2D1-202ENST00000473824 MICALL2Q8IY33 904 aa14.44□□□□□ -0.1
UBE2D1-202ENST00000473824 POTEJP0CG39 1038 aa14.43□□□□□ -0.1
UBE2D1-202ENST00000473824 TMEM121BQ9BXQ6 578 aaPredicted RBP14.42□□□□□ -0.1
UBE2D1-202ENST00000473824 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.4□□□□□ -0.1
UBE2D1-202ENST00000473824 PLCB2Q00722 1185 aa14.35□□□□□ -0.11
UBE2D1-202ENST00000473824 OTUD5Q96G74 571 aa14.33□□□□□ -0.12
UBE2D1-202ENST00000473824 SLAIN1Q8ND83 568 aa14.28□□□□□ -0.12
UBE2D1-202ENST00000473824 TMC2Q8TDI7 906 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms