RNA–Protein interactions for RNA: ENST00000473626.1

CNOT9-206, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-206ENST00000473626 PYGBP11216 843 aa14.42□□□□□ -0.1
CNOT9-206ENST00000473626 CD44P16070 742 aaKnown RBP14.37□□□□□ -0.11
CNOT9-206ENST00000473626 RNF25Q96BH1 459 aaPredicted RBP14.36□□□□□ -0.11
CNOT9-206ENST00000473626 TRIM41Q8WV44 630 aa14.34□□□□□ -0.11
CNOT9-206ENST00000473626 ZRANB1Q9UGI0 708 aa14.34□□□□□ -0.11
CNOT9-206ENST00000473626 CCDC61Q9Y6R9 512 aa14.34□□□□□ -0.11
CNOT9-206ENST00000473626 PAK3O75914 559 aaPredicted RBP14.32□□□□□ -0.12
CNOT9-206ENST00000473626 C19orf67A6NJJ6 358 aa14.31□□□□□ -0.12
CNOT9-206ENST00000473626 CHRM1P11229 460 aaPredicted RBP14.27□□□□□ -0.13
CNOT9-206ENST00000473626 PHF12Q96QT6 1004 aa14.27□□□□□ -0.13
CNOT9-206ENST00000473626 HAX1O00165 279 aa14.26□□□□□ -0.13
CNOT9-206ENST00000473626 EVX2Q03828 476 aa14.26□□□□□ -0.13
CNOT9-206ENST00000473626 POTEHQ6S545 545 aa14.25□□□□□ -0.13
CNOT9-206ENST00000473626 RIOK3O14730 519 aaKnown RBP14.22□□□□□ -0.13
CNOT9-206ENST00000473626 MAP3K13O43283 966 aa14.21□□□□□ -0.13
CNOT9-206ENST00000473626 KIF12Q96FN5 646 aa14.2□□□□□ -0.14
CNOT9-206ENST00000473626 PCDHB8Q9UN66 801 aa14.2□□□□□ -0.14
CNOT9-206ENST00000473626 PCDHB13Q9Y5F0 798 aa14.2□□□□□ -0.14
CNOT9-206ENST00000473626 CHGAP10645 457 aaKnown RBP14.16□□□□□ -0.14
CNOT9-206ENST00000473626 IFNL1Q8IU54 200 aa14.14□□□□□ -0.15
CNOT9-206ENST00000473626 ZNF579Q8NAF0 562 aaKnown RBP14.14□□□□□ -0.15
CNOT9-206ENST00000473626 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.11□□□□□ -0.15
CNOT9-206ENST00000473626 VGFO15240 615 aaPredicted RBP14.11□□□□□ -0.15
CNOT9-206ENST00000473626 ZFP91Q96JP5 570 aaPredicted RBP14.11□□□□□ -0.15
CNOT9-206ENST00000473626 ZNF467Q7Z7K2 595 aaPredicted RBP14.09□□□□□ -0.15
CNOT9-206ENST00000473626 MS4A3Q96HJ5 214 aa14.07□□□□□ -0.16
CNOT9-206ENST00000473626 STK25O00506 426 aa14.06□□□□□ -0.16
CNOT9-206ENST00000473626 TRPC6Q9Y210 931 aa14.06□□□□□ -0.16
CNOT9-206ENST00000473626 HS6ST3Q8IZP7 471 aa14.04□□□□□ -0.16
CNOT9-206ENST00000473626 SGIP1Q9BQI5 828 aa14.03□□□□□ -0.16
CNOT9-206ENST00000473626 BCL11BQ9C0K0 894 aaPredicted RBP14.03□□□□□ -0.16
CNOT9-206ENST00000473626 PSEN1P49768 467 aa14.02□□□□□ -0.17
CNOT9-206ENST00000473626 STK24Q9Y6E0 443 aa14.02□□□□□ -0.17
CNOT9-206ENST00000473626 GALR2O43603 387 aaPredicted RBP14.01□□□□□ -0.17
CNOT9-206ENST00000473626 PDAP1Q13442 181 aaKnown RBP14.01□□□□□ -0.17
CNOT9-206ENST00000473626 TAOK2Q9UL54 1235 aa14.01□□□□□ -0.17
CNOT9-206ENST00000473626 BBXQ8WY36 941 aaPredicted RBP13.99□□□□□ -0.17
CNOT9-206ENST00000473626 NKX1-1Q15270 411 aaPredicted RBP13.94□□□□□ -0.18
CNOT9-206ENST00000473626 PLCB2Q00722 1185 aa13.91□□□□□ -0.18
CNOT9-206ENST00000473626 PAXIP1Q6ZW49 1069 aaPredicted RBP13.91□□□□□ -0.18
CNOT9-206ENST00000473626 CFAP44Q96MT7 982 aa13.91□□□□□ -0.18
CNOT9-206ENST00000473626 GABBR2O75899 941 aa13.9□□□□□ -0.18
CNOT9-206ENST00000473626 TMEM106CQ9BVX2 250 aa13.9□□□□□ -0.18
CNOT9-206ENST00000473626 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.9□□□□□ -0.18
CNOT9-206ENST00000473626 CABP2Q9NPB3 220 aa13.88□□□□□ -0.19
CNOT9-206ENST00000473626 BMP2KQ9NSY1 1161 aaPredicted RBP13.86□□□□□ -0.19
CNOT9-206ENST00000473626 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
CNOT9-206ENST00000473626 TTLL13PA6NNM8 815 aa13.83□□□□□ -0.2
CNOT9-206ENST00000473626 EFCAB3Q8N7B9 438 aa13.83□□□□□ -0.2
CNOT9-206ENST00000473626 TIE1P35590 1138 aa13.81□□□□□ -0.2
CNOT9-206ENST00000473626 SPRYD3Q8NCJ5 442 aa13.81□□□□□ -0.2
CNOT9-206ENST00000473626 SLC24A1O60721 1099 aa13.79□□□□□ -0.2
CNOT9-206ENST00000473626 GTPBP6O43824 516 aaPredicted RBP13.78□□□□□ -0.2
CNOT9-206ENST00000473626 CLCN6P51797 869 aa13.78□□□□□ -0.2
CNOT9-206ENST00000473626 SP7Q8TDD2 431 aaPredicted RBP13.78□□□□□ -0.2
CNOT9-206ENST00000473626 HAP1P54257 671 aaPredicted RBP13.76□□□□□ -0.21
CNOT9-206ENST00000473626 ATN1P54259 1190 aaPredicted RBP13.76□□□□□ -0.21
CNOT9-206ENST00000473626 MFRPQ9BY79 579 aa13.75□□□□□ -0.21
CNOT9-206ENST00000473626 TRIM35Q9UPQ4 493 aa13.75□□□□□ -0.21
CNOT9-206ENST00000473626 ATMINO43313 823 aaPredicted RBP13.74□□□□□ -0.21
CNOT9-206ENST00000473626 PHF8Q9UPP1 1060 aa13.74□□□□□ -0.21
CNOT9-206ENST00000473626 GOLGA2Q08379 1002 aa13.72□□□□□ -0.21
CNOT9-206ENST00000473626 ASTLQ6HA08 431 aaPredicted RBP13.69□□□□□ -0.22
CNOT9-206ENST00000473626 MKRN3Q13064 507 aaKnown RBP13.68□□□□□ -0.22
CNOT9-206ENST00000473626 PELP1Q8IZL8 1130 aaKnown RBP13.68□□□□□ -0.22
CNOT9-206ENST00000473626 DCBLD2Q96PD2 775 aa13.68□□□□□ -0.22
CNOT9-206ENST00000473626 TSHZ2Q9NRE2 1034 aa13.68□□□□□ -0.22
CNOT9-206ENST00000473626 POTEIP0CG38 1075 aa13.67□□□□□ -0.22
CNOT9-206ENST00000473626 FBXO22Q8NEZ5 403 aa13.67□□□□□ -0.22
CNOT9-206ENST00000473626 SOX12O15370 315 aa13.66□□□□□ -0.22
CNOT9-206ENST00000473626 PPP1R37O75864 691 aa13.64□□□□□ -0.23
CNOT9-206ENST00000473626 MS4A4AQ96JQ5 239 aa13.64□□□□□ -0.23
CNOT9-206ENST00000473626 NLRP6P59044 892 aa13.62□□□□□ -0.23
CNOT9-206ENST00000473626 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.6□□□□□ -0.23
CNOT9-206ENST00000473626 RYDENQ9NUL5 291 aaKnown RBP13.57□□□□□ -0.24
CNOT9-206ENST00000473626 DPY19L2Q6NUT2 758 aa13.56□□□□□ -0.24
CNOT9-206ENST00000473626 IRX5P78411 483 aaPredicted RBP13.54□□□□□ -0.24
CNOT9-206ENST00000473626 ILDR1Q86SU0 546 aaPredicted RBP13.52□□□□□ -0.25
CNOT9-206ENST00000473626 KDM2AQ9Y2K7 1162 aa13.52□□□□□ -0.25
CNOT9-206ENST00000473626 PDCD7Q8N8D1 485 aaKnown RBP13.51□□□□□ -0.25
CNOT9-206ENST00000473626 COLQQ9Y215 455 aaPredicted RBP13.51□□□□□ -0.25
CNOT9-206ENST00000473626 CADPS2Q86UW7 1296 aa13.5□□□□□ -0.25
CNOT9-206ENST00000473626 POTEFA5A3E0 1075 aa13.49□□□□□ -0.25
CNOT9-206ENST00000473626 IER5LQ5T953 404 aa13.48□□□□□ -0.25
CNOT9-206ENST00000473626 OCEL1Q9H607 264 aa13.47□□□□□ -0.25
CNOT9-206ENST00000473626 METRNQ9UJH8 293 aa13.47□□□□□ -0.25
CNOT9-206ENST00000473626 PLCG2P16885 1265 aa13.46□□□□□ -0.25
CNOT9-206ENST00000473626 SLC39A7Q92504 469 aa13.46□□□□□ -0.25
CNOT9-206ENST00000473626 SEC24BO95487 1268 aa13.45□□□□□ -0.26
CNOT9-206ENST00000473626 VSIG10Q8N0Z9 540 aa13.43□□□□□ -0.26
CNOT9-206ENST00000473626 C7P10643 843 aa13.42□□□□□ -0.26
CNOT9-206ENST00000473626 MICALL2Q8IY33 904 aa13.36□□□□□ -0.27
CNOT9-206ENST00000473626 BOLA1Q9Y3E2 137 aa13.35□□□□□ -0.27
CNOT9-206ENST00000473626 NCKAP5LQ9HCH0 1330 aa13.31□□□□□ -0.28
CNOT9-206ENST00000473626 TMEM121BQ9BXQ6 578 aaPredicted RBP13.28□□□□□ -0.28
CNOT9-206ENST00000473626 G3V3G9 751 aa13.27□□□□□ -0.29
CNOT9-206ENST00000473626 POTEB2H3BUK9 544 aa13.27□□□□□ -0.29
CNOT9-206ENST00000473626 L3MBTL3Q96JM7 780 aaPredicted RBP13.27□□□□□ -0.29
CNOT9-206ENST00000473626 LARP6Q9BRS8 491 aaKnown RBP13.25□□□□□ -0.29
CNOT9-206ENST00000473626 POTEJP0CG39 1038 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms