RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 PLCD3Q8N3E9 789 aa12.67□□□□□ -0.38
GINS1-202ENST00000473460 PELP1Q8IZL8 1130 aaKnown RBP12.64□□□□□ -0.39
GINS1-202ENST00000473460 KIF12Q96FN5 646 aa12.62□□□□□ -0.39
GINS1-202ENST00000473460 ASTLQ6HA08 431 aaPredicted RBP12.6□□□□□ -0.39
GINS1-202ENST00000473460 NUBP1P53384 320 aa12.59□□□□□ -0.39
GINS1-202ENST00000473460 ATMINO43313 823 aaPredicted RBP12.58□□□□□ -0.4
GINS1-202ENST00000473460 POTEB2H3BUK9 544 aa12.57□□□□□ -0.4
GINS1-202ENST00000473460 MAP3K13O43283 966 aa12.55□□□□□ -0.4
GINS1-202ENST00000473460 TRPC6Q9Y210 931 aa12.55□□□□□ -0.4
GINS1-202ENST00000473460 ZBTB47Q9UFB7 747 aaPredicted RBP12.54□□□□□ -0.4
GINS1-202ENST00000473460 ATN1P54259 1190 aaPredicted RBP12.49□□□□□ -0.41
GINS1-202ENST00000473460 FBXO3Q9UK99 471 aa12.49□□□□□ -0.41
GINS1-202ENST00000473460 BMP2KQ9NSY1 1161 aaPredicted RBP12.48□□□□□ -0.41
GINS1-202ENST00000473460 METRNQ9UJH8 293 aa12.48□□□□□ -0.41
GINS1-202ENST00000473460 OTUD5Q96G74 571 aa12.47□□□□□ -0.41
GINS1-202ENST00000473460 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
GINS1-202ENST00000473460 C7P10643 843 aa12.43□□□□□ -0.42
GINS1-202ENST00000473460 TIE1P35590 1138 aa12.43□□□□□ -0.42
GINS1-202ENST00000473460 FAM212AQ96EL1 285 aa12.42□□□□□ -0.42
GINS1-202ENST00000473460 POTEJP0CG39 1038 aa12.41□□□□□ -0.42
GINS1-202ENST00000473460 SGIP1Q9BQI5 828 aa12.41□□□□□ -0.42
GINS1-202ENST00000473460 VASPP50552 380 aaPredicted RBP12.4□□□□□ -0.42
GINS1-202ENST00000473460 PCDHB13Q9Y5F0 798 aa12.4□□□□□ -0.42
GINS1-202ENST00000473460 POTEFA5A3E0 1075 aa12.38□□□□□ -0.43
GINS1-202ENST00000473460 TTLL13PA6NNM8 815 aa12.38□□□□□ -0.43
GINS1-202ENST00000473460 IFNL1Q8IU54 200 aa12.37□□□□□ -0.43
GINS1-202ENST00000473460 DCAF8Q5TAQ9 597 aa12.33□□□□□ -0.44
GINS1-202ENST00000473460 PYGBP11216 843 aa12.3□□□□□ -0.44
GINS1-202ENST00000473460 TRIM35Q9UPQ4 493 aa12.29□□□□□ -0.44
GINS1-202ENST00000473460 KLHL34Q8N239 644 aa12.27□□□□□ -0.45
GINS1-202ENST00000473460 COLQQ9Y215 455 aaPredicted RBP12.27□□□□□ -0.45
GINS1-202ENST00000473460 TMEM106CQ9BVX2 250 aa12.24□□□□□ -0.45
GINS1-202ENST00000473460 IFNLR1Q8IU57 520 aaPredicted RBP12.22□□□□□ -0.45
GINS1-202ENST00000473460 IER5LQ5T953 404 aa12.21□□□□□ -0.45
GINS1-202ENST00000473460 MAMSTRQ6ZN01 415 aa12.21□□□□□ -0.45
GINS1-202ENST00000473460 PCDHB8Q9UN66 801 aa12.21□□□□□ -0.45
GINS1-202ENST00000473460 GSE1Q14687 1217 aa12.19□□□□□ -0.46
GINS1-202ENST00000473460 SEC24BO95487 1268 aa12.18□□□□□ -0.46
GINS1-202ENST00000473460 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
GINS1-202ENST00000473460 CHRM1P11229 460 aaPredicted RBP12.13□□□□□ -0.47
GINS1-202ENST00000473460 IRX5P78411 483 aaPredicted RBP12.13□□□□□ -0.47
GINS1-202ENST00000473460 SPOCK2Q92563 424 aa12.12□□□□□ -0.47
GINS1-202ENST00000473460 LCE2DQ5TA82 110 aaPredicted RBP12.08□□□□□ -0.48
GINS1-202ENST00000473460 ZNF467Q7Z7K2 595 aaPredicted RBP12.08□□□□□ -0.48
GINS1-202ENST00000473460 POTEMA6NI47 508 aa12.06□□□□□ -0.48
GINS1-202ENST00000473460 PLCG2P16885 1265 aa12.06□□□□□ -0.48
GINS1-202ENST00000473460 POTEGQ6S5H5 508 aa12.03□□□□□ -0.48
GINS1-202ENST00000473460 OCEL1Q9H607 264 aa12.03□□□□□ -0.48
GINS1-202ENST00000473460 CIZ1Q9ULV3 898 aaPredicted RBP12.03□□□□□ -0.48
GINS1-202ENST00000473460 PSEN1P49768 467 aa12.01□□□□□ -0.49
GINS1-202ENST00000473460 FAM163AQ96GL9 167 aaPredicted RBP11.99□□□□□ -0.49
GINS1-202ENST00000473460 PDCD7Q8N8D1 485 aaKnown RBP11.97□□□□□ -0.49
GINS1-202ENST00000473460 SLAIN1Q8ND83 568 aa11.95□□□□□ -0.5
GINS1-202ENST00000473460 PDAP1Q13442 181 aaKnown RBP11.94□□□□□ -0.5
GINS1-202ENST00000473460 MKRN3Q13064 507 aaKnown RBP11.92□□□□□ -0.5
GINS1-202ENST00000473460 GOLGA2Q08379 1002 aa11.9□□□□□ -0.5
GINS1-202ENST00000473460 ILDR1Q86SU0 546 aaPredicted RBP11.89□□□□□ -0.51
GINS1-202ENST00000473460 PLSCR2Q9NRY7 297 aa11.88□□□□□ -0.51
GINS1-202ENST00000473460 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.88□□□□□ -0.518e-6■■■□□ 14.7
GINS1-202ENST00000473460 CABP2Q9NPB3 220 aa11.86□□□□□ -0.51
GINS1-202ENST00000473460 TRIM41Q8WV44 630 aa11.85□□□□□ -0.51
GINS1-202ENST00000473460 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.84□□□□□ -0.51
GINS1-202ENST00000473460 ST18O60284 1047 aa11.82□□□□□ -0.52
GINS1-202ENST00000473460 PCDH10Q9P2E7 1040 aa11.82□□□□□ -0.52
GINS1-202ENST00000473460 DPY19L2Q6NUT2 758 aa11.81□□□□□ -0.52
GINS1-202ENST00000473460 RNF25Q96BH1 459 aaPredicted RBP11.81□□□□□ -0.52
GINS1-202ENST00000473460 L3MBTL3Q96JM7 780 aaPredicted RBP11.81□□□□□ -0.52
GINS1-202ENST00000473460 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
GINS1-202ENST00000473460 EFCAB3Q8N7B9 438 aa11.74□□□□□ -0.53
GINS1-202ENST00000473460 RIOK3O14730 519 aaKnown RBP11.73□□□□□ -0.53
GINS1-202ENST00000473460 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.7□□□□□ -0.54
GINS1-202ENST00000473460 ZFP91Q96JP5 570 aaPredicted RBP11.7□□□□□ -0.54
GINS1-202ENST00000473460 BOLA1Q9Y3E2 137 aa11.7□□□□□ -0.54
GINS1-202ENST00000473460 SNPHO15079 494 aa11.69□□□□□ -0.54
GINS1-202ENST00000473460 CDAN1Q8IWY9 1227 aa11.69□□□□□ -0.54
GINS1-202ENST00000473460 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
GINS1-202ENST00000473460 TMEM121BQ9BXQ6 578 aaPredicted RBP11.67□□□□□ -0.54
GINS1-202ENST00000473460 MARVELD3Q96A59 401 aa11.63□□□□□ -0.55
GINS1-202ENST00000473460 MS4A4AQ96JQ5 239 aa11.62□□□□□ -0.55
GINS1-202ENST00000473460 G3V3G9 751 aa11.61□□□□□ -0.55
GINS1-202ENST00000473460 SOX12O15370 315 aa11.6□□□□□ -0.55
GINS1-202ENST00000473460 PHF8Q9UPP1 1060 aa11.6□□□□□ -0.55
GINS1-202ENST00000473460 HOXB3P14651 431 aaPredicted RBP11.57□□□□□ -0.56
GINS1-202ENST00000473460 MICALL2Q8IY33 904 aa11.57□□□□□ -0.56
GINS1-202ENST00000473460 PKD2Q13563 968 aa11.56□□□□□ -0.56
GINS1-202ENST00000473460 TMEM92Q6UXU6 159 aa11.55□□□□□ -0.56
GINS1-202ENST00000473460 BCL11BQ9C0K0 894 aaPredicted RBP11.55□□□□□ -0.56
GINS1-202ENST00000473460 ECM2O94769 699 aaPredicted RBP11.54□□□□□ -0.56
GINS1-202ENST00000473460 POTEB3A0JP26 581 aa11.53□□□□□ -0.56
GINS1-202ENST00000473460 POTEBQ6S5H4 581 aa11.53□□□□□ -0.56
GINS1-202ENST00000473460 EMP3P54852 163 aa11.52□□□□□ -0.57
GINS1-202ENST00000473460 FBXO22Q8NEZ5 403 aa11.52□□□□□ -0.57
GINS1-202ENST00000473460 STK24Q9Y6E0 443 aa11.51□□□□□ -0.57
GINS1-202ENST00000473460 RGL2O15211 777 aa11.5□□□□□ -0.57
GINS1-202ENST00000473460 TAOK2Q9UL54 1235 aa11.49□□□□□ -0.57
GINS1-202ENST00000473460 HS3ST6Q96QI5 342 aa11.48□□□□□ -0.57
GINS1-202ENST00000473460 MFRPQ9BY79 579 aa11.48□□□□□ -0.57
GINS1-202ENST00000473460 STK25O00506 426 aa11.47□□□□□ -0.57
GINS1-202ENST00000473460 NLRP6P59044 892 aa11.47□□□□□ -0.57
GINS1-202ENST00000473460 FAM205CA6NFA0 338 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms