RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 SPOCK2Q92563 424 aa12.6□□□□□ -0.39
CCDC66-215ENST00000473322 CCDC61Q9Y6R9 512 aa12.6□□□□□ -0.39
CCDC66-215ENST00000473322 GABBR2O75899 941 aa12.59□□□□□ -0.39
CCDC66-215ENST00000473322 PHF12Q96QT6 1004 aa12.54□□□□□ -0.4
CCDC66-215ENST00000473322 GSE1Q14687 1217 aa12.52□□□□□ -0.41
CCDC66-215ENST00000473322 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
CCDC66-215ENST00000473322 KIF12Q96FN5 646 aa12.49□□□□□ -0.41
CCDC66-215ENST00000473322 GALR2O43603 387 aaPredicted RBP12.44□□□□□ -0.42
CCDC66-215ENST00000473322 SGIP1Q9BQI5 828 aa12.44□□□□□ -0.42
CCDC66-215ENST00000473322 MAP3K13O43283 966 aa12.41□□□□□ -0.42
CCDC66-215ENST00000473322 CHRM1P11229 460 aaPredicted RBP12.41□□□□□ -0.42
CCDC66-215ENST00000473322 MS4A3Q96HJ5 214 aa12.4□□□□□ -0.42
CCDC66-215ENST00000473322 CIZ1Q9ULV3 898 aaPredicted RBP12.4□□□□□ -0.42
CCDC66-215ENST00000473322 PYGBP11216 843 aa12.37□□□□□ -0.43
CCDC66-215ENST00000473322 TRIM41Q8WV44 630 aa12.36□□□□□ -0.43
CCDC66-215ENST00000473322 PCDHB13Q9Y5F0 798 aa12.36□□□□□ -0.43
CCDC66-215ENST00000473322 DCBLD2Q96PD2 775 aa12.35□□□□□ -0.43
CCDC66-215ENST00000473322 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
CCDC66-215ENST00000473322 IFNL1Q8IU54 200 aa12.3□□□□□ -0.44
CCDC66-215ENST00000473322 ZNF467Q7Z7K2 595 aaPredicted RBP12.28□□□□□ -0.44
CCDC66-215ENST00000473322 TIE1P35590 1138 aa12.27□□□□□ -0.45
CCDC66-215ENST00000473322 ASTLQ6HA08 431 aaPredicted RBP12.27□□□□□ -0.45
CCDC66-215ENST00000473322 TRPC6Q9Y210 931 aa12.24□□□□□ -0.45
CCDC66-215ENST00000473322 ATMINO43313 823 aaPredicted RBP12.23□□□□□ -0.45
CCDC66-215ENST00000473322 BMP2KQ9NSY1 1161 aaPredicted RBP12.22□□□□□ -0.45
CCDC66-215ENST00000473322 PCDHB8Q9UN66 801 aa12.22□□□□□ -0.45
CCDC66-215ENST00000473322 PKD2Q13563 968 aa12.2□□□□□ -0.46
CCDC66-215ENST00000473322 TTLL13PA6NNM8 815 aa12.19□□□□□ -0.46
CCDC66-215ENST00000473322 ATN1P54259 1190 aaPredicted RBP12.17□□□□□ -0.46
CCDC66-215ENST00000473322 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
CCDC66-215ENST00000473322 TMEM106CQ9BVX2 250 aa12.16□□□□□ -0.46
CCDC66-215ENST00000473322 ECM2O94769 699 aaPredicted RBP12.15□□□□□ -0.46
CCDC66-215ENST00000473322 PDAP1Q13442 181 aaKnown RBP12.14□□□□□ -0.47
CCDC66-215ENST00000473322 RIOK3O14730 519 aaKnown RBP12.13□□□□□ -0.47
CCDC66-215ENST00000473322 C7P10643 843 aa12.12□□□□□ -0.47
CCDC66-215ENST00000473322 PSEN1P49768 467 aa12.12□□□□□ -0.47
CCDC66-215ENST00000473322 SLC39A7Q92504 469 aa12.12□□□□□ -0.47
CCDC66-215ENST00000473322 RNF25Q96BH1 459 aaPredicted RBP12.12□□□□□ -0.47
CCDC66-215ENST00000473322 TRIM35Q9UPQ4 493 aa12.1□□□□□ -0.47
CCDC66-215ENST00000473322 IER5LQ5T953 404 aa12.07□□□□□ -0.48
CCDC66-215ENST00000473322 TAOK2Q9UL54 1235 aa12.07□□□□□ -0.48
CCDC66-215ENST00000473322 VGFO15240 615 aaPredicted RBP12.06□□□□□ -0.48
CCDC66-215ENST00000473322 METRNQ9UJH8 293 aa12.06□□□□□ -0.48
CCDC66-215ENST00000473322 RGL2O15211 777 aa12.02□□□□□ -0.49
CCDC66-215ENST00000473322 GOLGA2Q08379 1002 aa11.98□□□□□ -0.49
CCDC66-215ENST00000473322 LHX8Q68G74 356 aa11.98□□□□□ -0.49
CCDC66-215ENST00000473322 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.97□□□□□ -0.49
CCDC66-215ENST00000473322 ZFP91Q96JP5 570 aaPredicted RBP11.97□□□□□ -0.49
CCDC66-215ENST00000473322 MKRN3Q13064 507 aaKnown RBP11.96□□□□□ -0.49
CCDC66-215ENST00000473322 SEC24BO95487 1268 aa11.95□□□□□ -0.5
CCDC66-215ENST00000473322 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
CCDC66-215ENST00000473322 AMER1Q5JTC6 1135 aaPredicted RBP11.95□□□□□ -0.5
CCDC66-215ENST00000473322 POTEFA5A3E0 1075 aa11.94□□□□□ -0.5
CCDC66-215ENST00000473322 CABP2Q9NPB3 220 aa11.94□□□□□ -0.5
CCDC66-215ENST00000473322 COLQQ9Y215 455 aaPredicted RBP11.94□□□□□ -0.5
CCDC66-215ENST00000473322 OCEL1Q9H607 264 aa11.92□□□□□ -0.5
CCDC66-215ENST00000473322 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
CCDC66-215ENST00000473322 PLCG2P16885 1265 aa11.9□□□□□ -0.5
CCDC66-215ENST00000473322 ILDR1Q86SU0 546 aaPredicted RBP11.9□□□□□ -0.5
CCDC66-215ENST00000473322 BCL11BQ9C0K0 894 aaPredicted RBP11.89□□□□□ -0.51
CCDC66-215ENST00000473322 STK25O00506 426 aa11.88□□□□□ -0.51
CCDC66-215ENST00000473322 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.87□□□□□ -0.515e-7■■■■■ 29
CCDC66-215ENST00000473322 EFCAB3Q8N7B9 438 aa11.86□□□□□ -0.51
CCDC66-215ENST00000473322 STK24Q9Y6E0 443 aa11.86□□□□□ -0.51
CCDC66-215ENST00000473322 SOX12O15370 315 aa11.85□□□□□ -0.51
CCDC66-215ENST00000473322 PDCD7Q8N8D1 485 aaKnown RBP11.85□□□□□ -0.51
CCDC66-215ENST00000473322 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
CCDC66-215ENST00000473322 POTEJP0CG39 1038 aa11.83□□□□□ -0.52
CCDC66-215ENST00000473322 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
CCDC66-215ENST00000473322 HS6ST3Q8IZP7 471 aa11.82□□□□□ -0.52
CCDC66-215ENST00000473322 OTUD5Q96G74 571 aa11.79□□□□□ -0.52
CCDC66-215ENST00000473322 SLC24A1O60721 1099 aa11.77□□□□□ -0.53
CCDC66-215ENST00000473322 CHGAP10645 457 aaKnown RBP11.77□□□□□ -0.53
CCDC66-215ENST00000473322 L3MBTL3Q96JM7 780 aaPredicted RBP11.76□□□□□ -0.53
CCDC66-215ENST00000473322 DNAJC5Q9H3Z4 198 aa11.76□□□□□ -0.53
CCDC66-215ENST00000473322 SCUBE2Q9NQ36 999 aa11.76□□□□□ -0.53
CCDC66-215ENST00000473322 NLRP6P59044 892 aa11.74□□□□□ -0.53
CCDC66-215ENST00000473322 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
CCDC66-215ENST00000473322 DPY19L2Q6NUT2 758 aa11.72□□□□□ -0.53
CCDC66-215ENST00000473322 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
CCDC66-215ENST00000473322 MFRPQ9BY79 579 aa11.72□□□□□ -0.53
CCDC66-215ENST00000473322 MS4A4AQ96JQ5 239 aa11.71□□□□□ -0.53
CCDC66-215ENST00000473322 DCAF8L2P0C7V8 631 aa11.69□□□□□ -0.54
CCDC66-215ENST00000473322 BOLA1Q9Y3E2 137 aa11.69□□□□□ -0.54
CCDC66-215ENST00000473322 TMEM121BQ9BXQ6 578 aaPredicted RBP11.67□□□□□ -0.54
CCDC66-215ENST00000473322 G3V3G9 751 aa11.65□□□□□ -0.54
CCDC66-215ENST00000473322 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.64□□□□□ -0.55
CCDC66-215ENST00000473322 C3orf67Q6ZVT6 689 aa11.63□□□□□ -0.55
CCDC66-215ENST00000473322 NKX1-1Q15270 411 aaPredicted RBP11.62□□□□□ -0.55
CCDC66-215ENST00000473322 RYDENQ9NUL5 291 aaKnown RBP11.61□□□□□ -0.55
CCDC66-215ENST00000473322 MICALL2Q8IY33 904 aa11.6□□□□□ -0.55
CCDC66-215ENST00000473322 SLAIN1Q8ND83 568 aa11.59□□□□□ -0.55
CCDC66-215ENST00000473322 PPP1R37O75864 691 aa11.52□□□□□ -0.57
CCDC66-215ENST00000473322 BBXQ8WY36 941 aaPredicted RBP11.52□□□□□ -0.57
CCDC66-215ENST00000473322 GTPBP6O43824 516 aaPredicted RBP11.5□□□□□ -0.57
CCDC66-215ENST00000473322 SNPHO15079 494 aa11.46□□□□□ -0.57
CCDC66-215ENST00000473322 TMEM92Q6UXU6 159 aa11.45□□□□□ -0.58
CCDC66-215ENST00000473322 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.42□□□□□ -0.58
CCDC66-215ENST00000473322 KIF3CO14782 793 aa11.4□□□□□ -0.58
CCDC66-215ENST00000473322 PLSCR2Q9NRY7 297 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms