RNA–Protein interactions for RNA: ENST00000473101.1

RGPD6-208, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-208ENST00000473101 POTEGQ6S5H5 508 aa9.07□□□□□ -0.96
RGPD6-208ENST00000473101 RASEFQ8IZ41 740 aa9.01□□□□□ -0.97
RGPD6-208ENST00000473101 MS4A3Q96HJ5 214 aa8.99□□□□□ -0.97
RGPD6-208ENST00000473101 ZBTB47Q9UFB7 747 aaPredicted RBP8.99□□□□□ -0.97
RGPD6-208ENST00000473101 FBXO3Q9UK99 471 aa8.99□□□□□ -0.97
RGPD6-208ENST00000473101 CCDC61Q9Y6R9 512 aa8.99□□□□□ -0.97
RGPD6-208ENST00000473101 PCDH10Q9P2E7 1040 aa8.98□□□□□ -0.97
RGPD6-208ENST00000473101 AMER1Q5JTC6 1135 aaPredicted RBP8.94□□□□□ -0.98
RGPD6-208ENST00000473101 NUBP1P53384 320 aa8.93□□□□□ -0.98
RGPD6-208ENST00000473101 KIF12Q96FN5 646 aa8.93□□□□□ -0.98
RGPD6-208ENST00000473101 OTUD5Q96G74 571 aa8.92□□□□□ -0.98
RGPD6-208ENST00000473101 MAP3K13O43283 966 aa8.91□□□□□ -0.98
RGPD6-208ENST00000473101 VASPP50552 380 aaPredicted RBP8.91□□□□□ -0.98
RGPD6-208ENST00000473101 RTN4Q9NQC3 1192 aaKnown RBP8.9□□□□□ -0.98
RGPD6-208ENST00000473101 PELP1Q8IZL8 1130 aaKnown RBP8.89□□□□□ -0.99
RGPD6-208ENST00000473101 FAM212AQ96EL1 285 aa8.89□□□□□ -0.99
RGPD6-208ENST00000473101 KLHL34Q8N239 644 aa8.88□□□□□ -0.99
RGPD6-208ENST00000473101 ATMINO43313 823 aaPredicted RBP8.86□□□□□ -0.99
RGPD6-208ENST00000473101 TRPC6Q9Y210 931 aa8.86□□□□□ -0.99
RGPD6-208ENST00000473101 DCAF8Q5TAQ9 597 aa8.85□□□□□ -0.99
RGPD6-208ENST00000473101 ASTLQ6HA08 431 aaPredicted RBP8.85□□□□□ -0.99
RGPD6-208ENST00000473101 PCDHB13Q9Y5F0 798 aa8.84□□□□□ -0.99
RGPD6-208ENST00000473101 ATN1P54259 1190 aaPredicted RBP8.83□□□□□ -1
RGPD6-208ENST00000473101 BMP2KQ9NSY1 1161 aaPredicted RBP8.82□□□□□ -1
RGPD6-208ENST00000473101 METRNQ9UJH8 293 aa8.82□□□□□ -1
RGPD6-208ENST00000473101 SLC24A1O60721 1099 aa8.81□□□□□ -1
RGPD6-208ENST00000473101 PYGBP11216 843 aa8.79□□□□□ -1
RGPD6-208ENST00000473101 IFNL1Q8IU54 200 aa8.79□□□□□ -1
RGPD6-208ENST00000473101 SLC39A7Q92504 469 aa8.79□□□□□ -1
RGPD6-208ENST00000473101 POTEB2H3BUK9 544 aa8.78□□□□□ -1
RGPD6-208ENST00000473101 C7P10643 843 aa8.78□□□□□ -1
RGPD6-208ENST00000473101 TIE1P35590 1138 aa8.78□□□□□ -1
RGPD6-208ENST00000473101 TTLL13PA6NNM8 815 aa8.77□□□□□ -1.01
RGPD6-208ENST00000473101 SGIP1Q9BQI5 828 aa8.77□□□□□ -1.01
RGPD6-208ENST00000473101 IFNLR1Q8IU57 520 aaPredicted RBP8.75□□□□□ -1.01
RGPD6-208ENST00000473101 GSE1Q14687 1217 aa8.73□□□□□ -1.01
RGPD6-208ENST00000473101 TMEM106CQ9BVX2 250 aa8.72□□□□□ -1.01
RGPD6-208ENST00000473101 PCDHB8Q9UN66 801 aa8.72□□□□□ -1.01
RGPD6-208ENST00000473101 TRIM35Q9UPQ4 493 aa8.72□□□□□ -1.01
RGPD6-208ENST00000473101 SPOCK2Q92563 424 aa8.71□□□□□ -1.02
RGPD6-208ENST00000473101 SEC24BO95487 1268 aa8.69□□□□□ -1.02
RGPD6-208ENST00000473101 CIZ1Q9ULV3 898 aaPredicted RBP8.69□□□□□ -1.02
RGPD6-208ENST00000473101 POTEFA5A3E0 1075 aa8.68□□□□□ -1.02
RGPD6-208ENST00000473101 POTEJP0CG39 1038 aa8.68□□□□□ -1.02
RGPD6-208ENST00000473101 COLQQ9Y215 455 aaPredicted RBP8.67□□□□□ -1.02
RGPD6-208ENST00000473101 IER5LQ5T953 404 aa8.64□□□□□ -1.03
RGPD6-208ENST00000473101 FAM163AQ96GL9 167 aaPredicted RBP8.64□□□□□ -1.03
RGPD6-208ENST00000473101 MAMSTRQ6ZN01 415 aa8.63□□□□□ -1.03
RGPD6-208ENST00000473101 ZNF467Q7Z7K2 595 aaPredicted RBP8.63□□□□□ -1.03
RGPD6-208ENST00000473101 CHRM1P11229 460 aaPredicted RBP8.61□□□□□ -1.03
RGPD6-208ENST00000473101 LCE2DQ5TA82 110 aaPredicted RBP8.61□□□□□ -1.03
RGPD6-208ENST00000473101 SCUBE2Q9NQ36 999 aa8.61□□□□□ -1.03
RGPD6-208ENST00000473101 PLCG2P16885 1265 aa8.6□□□□□ -1.03
RGPD6-208ENST00000473101 PSEN1P49768 467 aa8.57□□□□□ -1.04
RGPD6-208ENST00000473101 GOLGA2Q08379 1002 aa8.56□□□□□ -1.04
RGPD6-208ENST00000473101 IRX5P78411 483 aaPredicted RBP8.55□□□□□ -1.04
RGPD6-208ENST00000473101 PDAP1Q13442 181 aaKnown RBP8.54□□□□□ -1.04
RGPD6-208ENST00000473101 CDAN1Q8IWY9 1227 aa8.53□□□□□ -1.04
RGPD6-208ENST00000473101 OCEL1Q9H607 264 aa8.53□□□□□ -1.04
RGPD6-208ENST00000473101 MKRN3Q13064 507 aaKnown RBP8.52□□□□□ -1.05
RGPD6-208ENST00000473101 TRIM41Q8WV44 630 aa8.49□□□□□ -1.05
RGPD6-208ENST00000473101 CABP2Q9NPB3 220 aa8.49□□□□□ -1.05
RGPD6-208ENST00000473101 SLAIN1Q8ND83 568 aa8.48□□□□□ -1.05
RGPD6-208ENST00000473101 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.47□□□□□ -1.05
RGPD6-208ENST00000473101 PDCD7Q8N8D1 485 aaKnown RBP8.46□□□□□ -1.06
RGPD6-208ENST00000473101 RIOK3O14730 519 aaKnown RBP8.42□□□□□ -1.06
RGPD6-208ENST00000473101 RNF25Q96BH1 459 aaPredicted RBP8.42□□□□□ -1.06
RGPD6-208ENST00000473101 MMRN1Q13201 1228 aa8.41□□□□□ -1.06
RGPD6-208ENST00000473101 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.41□□□□□ -1.06
RGPD6-208ENST00000473101 DPY19L2Q6NUT2 758 aa8.4□□□□□ -1.06
RGPD6-208ENST00000473101 C3orf67Q6ZVT6 689 aa8.4□□□□□ -1.06
RGPD6-208ENST00000473101 L3MBTL3Q96JM7 780 aaPredicted RBP8.4□□□□□ -1.06
RGPD6-208ENST00000473101 EFCAB3Q8N7B9 438 aa8.39□□□□□ -1.07
RGPD6-208ENST00000473101 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.38□□□□□ -1.07
RGPD6-208ENST00000473101 ZFP91Q96JP5 570 aaPredicted RBP8.38□□□□□ -1.07
RGPD6-208ENST00000473101 VGFO15240 615 aaPredicted RBP8.36□□□□□ -1.07
RGPD6-208ENST00000473101 G3V3G9 751 aa8.35□□□□□ -1.07
RGPD6-208ENST00000473101 ILDR1Q86SU0 546 aaPredicted RBP8.35□□□□□ -1.07
RGPD6-208ENST00000473101 ECM2O94769 699 aaPredicted RBP8.34□□□□□ -1.07
RGPD6-208ENST00000473101 ST18O60284 1047 aa8.33□□□□□ -1.08
RGPD6-208ENST00000473101 BOLA1Q9Y3E2 137 aa8.33□□□□□ -1.08
RGPD6-208ENST00000473101 SPNS2Q8IVW8 549 aa8.32□□□□□ -1.08
RGPD6-208ENST00000473101 PKD2Q13563 968 aa8.31□□□□□ -1.08
RGPD6-208ENST00000473101 SNPHO15079 494 aa8.3□□□□□ -1.08
RGPD6-208ENST00000473101 BCL11BQ9C0K0 894 aaPredicted RBP8.3□□□□□ -1.08
RGPD6-208ENST00000473101 TAOK2Q9UL54 1235 aa8.29□□□□□ -1.08
RGPD6-208ENST00000473101 STK24Q9Y6E0 443 aa8.29□□□□□ -1.08
RGPD6-208ENST00000473101 SOX12O15370 315 aa8.28□□□□□ -1.08
RGPD6-208ENST00000473101 PHF8Q9UPP1 1060 aa8.28□□□□□ -1.08
RGPD6-208ENST00000473101 RGL2O15211 777 aa8.27□□□□□ -1.09
RGPD6-208ENST00000473101 STK25O00506 426 aa8.26□□□□□ -1.09
RGPD6-208ENST00000473101 MS4A4AQ96JQ5 239 aa8.25□□□□□ -1.09
RGPD6-208ENST00000473101 MARVELD3Q96A59 401 aa8.24□□□□□ -1.09
RGPD6-208ENST00000473101 MICALL2Q8IY33 904 aa8.23□□□□□ -1.09
RGPD6-208ENST00000473101 TMEM121BQ9BXQ6 578 aaPredicted RBP8.23□□□□□ -1.09
RGPD6-208ENST00000473101 NLRP6P59044 892 aa8.22□□□□□ -1.09
RGPD6-208ENST00000473101 PLCB2Q00722 1185 aa8.22□□□□□ -1.09
RGPD6-208ENST00000473101 DCAF8L2P0C7V8 631 aa8.21□□□□□ -1.1
RGPD6-208ENST00000473101 EMP3P54852 163 aa8.18□□□□□ -1.1
RGPD6-208ENST00000473101 FBXO22Q8NEZ5 403 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms