RNA–Protein interactions for RNA: ENST00000472977.6

CTSS-203, Transcript of cathepsin S, humanhuman

TSL 5

Gene CTSS, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-203ENST00000472977 ATMINO43313 823 aaPredicted RBP15.41■□□□□ 0.06
CTSS-203ENST00000472977 SLC39A7Q92504 469 aa15.39■□□□□ 0.05
CTSS-203ENST00000472977 C7P10643 843 aa15.37■□□□□ 0.05
CTSS-203ENST00000472977 TSPYL2Q9H2G4 693 aaPredicted RBP15.37■□□□□ 0.05
CTSS-203ENST00000472977 CCDC61Q9Y6R9 512 aa15.36■□□□□ 0.05
CTSS-203ENST00000472977 POTEJP0CG39 1038 aa15.3■□□□□ 0.04
CTSS-203ENST00000472977 POTEMA6NI47 508 aa15.29■□□□□ 0.04
CTSS-203ENST00000472977 KIF12Q96FN5 646 aa15.28■□□□□ 0.04
CTSS-203ENST00000472977 ATN1P54259 1190 aaPredicted RBP15.26■□□□□ 0.03
CTSS-203ENST00000472977 POTEGQ6S5H5 508 aa15.25■□□□□ 0.03
CTSS-203ENST00000472977 MAMSTRQ6ZN01 415 aa15.25■□□□□ 0.03
CTSS-203ENST00000472977 PLEKHG5O94827 1062 aa15.21■□□□□ 0.03
CTSS-203ENST00000472977 BMP2KQ9NSY1 1161 aaPredicted RBP15.2■□□□□ 0.02
CTSS-203ENST00000472977 RASEFQ8IZ41 740 aa15.18■□□□□ 0.02
CTSS-203ENST00000472977 MIER1Q8N108 512 aa15.18■□□□□ 0.02
CTSS-203ENST00000472977 TRPC6Q9Y210 931 aa15.17■□□□□ 0.02
CTSS-203ENST00000472977 MAP3K13O43283 966 aa15.16■□□□□ 0.02
CTSS-203ENST00000472977 SCUBE2Q9NQ36 999 aa15.14■□□□□ 0.01
CTSS-203ENST00000472977 TIE1P35590 1138 aa15.13■□□□□ 0.01
CTSS-203ENST00000472977 POTEFA5A3E0 1075 aa15.12■□□□□ 0.01
CTSS-203ENST00000472977 PCDH10Q9P2E7 1040 aa15.08■□□□□ 0
CTSS-203ENST00000472977 LCE2DQ5TA82 110 aaPredicted RBP15.07■□□□□ 0
CTSS-203ENST00000472977 TTLL13PA6NNM8 815 aa15.04■□□□□ -0
CTSS-203ENST00000472977 PLCD3Q8N3E9 789 aa15.03■□□□□ -0
CTSS-203ENST00000472977 FAM163AQ96GL9 167 aaPredicted RBP15□□□□□ -0.01
CTSS-203ENST00000472977 SGIP1Q9BQI5 828 aa15□□□□□ -0.01
CTSS-203ENST00000472977 COLQQ9Y215 455 aaPredicted RBP15□□□□□ -0.01
CTSS-203ENST00000472977 SEC24BO95487 1268 aa14.97□□□□□ -0.01
CTSS-203ENST00000472977 ZBTB47Q9UFB7 747 aaPredicted RBP14.97□□□□□ -0.01
CTSS-203ENST00000472977 PCDHB13Q9Y5F0 798 aa14.97□□□□□ -0.01
CTSS-203ENST00000472977 NUBP1P53384 320 aa14.95□□□□□ -0.02
CTSS-203ENST00000472977 IER5LQ5T953 404 aa14.95□□□□□ -0.02
CTSS-203ENST00000472977 TRIM35Q9UPQ4 493 aa14.94□□□□□ -0.02
CTSS-203ENST00000472977 IFNL1Q8IU54 200 aa14.88□□□□□ -0.03
CTSS-203ENST00000472977 FAM212AQ96EL1 285 aa14.87□□□□□ -0.03
CTSS-203ENST00000472977 TMEM106CQ9BVX2 250 aa14.82□□□□□ -0.04
CTSS-203ENST00000472977 PLCG2P16885 1265 aa14.75□□□□□ -0.05
CTSS-203ENST00000472977 FKBP8Q14318 412 aa14.74□□□□□ -0.05
CTSS-203ENST00000472977 SLAIN1Q8ND83 568 aa14.74□□□□□ -0.05
CTSS-203ENST00000472977 IRX5P78411 483 aaPredicted RBP14.72□□□□□ -0.05
CTSS-203ENST00000472977 CDAN1Q8IWY9 1227 aa14.69□□□□□ -0.06
CTSS-203ENST00000472977 ST18O60284 1047 aa14.66□□□□□ -0.06
CTSS-203ENST00000472977 PYGBP11216 843 aa14.64□□□□□ -0.07
CTSS-203ENST00000472977 DCAF8Q5TAQ9 597 aa14.64□□□□□ -0.07
CTSS-203ENST00000472977 OCEL1Q9H607 264 aa14.63□□□□□ -0.07
CTSS-203ENST00000472977 PCDHB8Q9UN66 801 aa14.59□□□□□ -0.07
CTSS-203ENST00000472977 FBXO3Q9UK99 471 aa14.57□□□□□ -0.08
CTSS-203ENST00000472977 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.52□□□□□ -0.09
CTSS-203ENST00000472977 TMEM121BQ9BXQ6 578 aaPredicted RBP14.51□□□□□ -0.09
CTSS-203ENST00000472977 SNPHO15079 494 aa14.49□□□□□ -0.09
CTSS-203ENST00000472977 ZNF467Q7Z7K2 595 aaPredicted RBP14.46□□□□□ -0.09
CTSS-203ENST00000472977 PDCD7Q8N8D1 485 aaKnown RBP14.46□□□□□ -0.09
CTSS-203ENST00000472977 GSE1Q14687 1217 aa14.45□□□□□ -0.1
CTSS-203ENST00000472977 VASPP50552 380 aaPredicted RBP14.42□□□□□ -0.1
CTSS-203ENST00000472977 KLHL34Q8N239 644 aa14.41□□□□□ -0.1
CTSS-203ENST00000472977 CHRM1P11229 460 aaPredicted RBP14.39□□□□□ -0.11
CTSS-203ENST00000472977 MKRN3Q13064 507 aaKnown RBP14.39□□□□□ -0.11
CTSS-203ENST00000472977 GOLGA2Q08379 1002 aa14.38□□□□□ -0.11
CTSS-203ENST00000472977 C3orf67Q6ZVT6 689 aa14.38□□□□□ -0.11
CTSS-203ENST00000472977 MARVELD3Q96A59 401 aa14.38□□□□□ -0.11
CTSS-203ENST00000472977 L3MBTL3Q96JM7 780 aaPredicted RBP14.36□□□□□ -0.11
CTSS-203ENST00000472977 SPNS2Q8IVW8 549 aa14.35□□□□□ -0.11
CTSS-203ENST00000472977 MMRN1Q13201 1228 aa14.34□□□□□ -0.11
CTSS-203ENST00000472977 PSEN1P49768 467 aa14.33□□□□□ -0.12
CTSS-203ENST00000472977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.32□□□□□ -0.12
CTSS-203ENST00000472977 EMP3P54852 163 aa14.27□□□□□ -0.13
CTSS-203ENST00000472977 ILDR1Q86SU0 546 aaPredicted RBP14.27□□□□□ -0.13
CTSS-203ENST00000472977 PDAP1Q13442 181 aaKnown RBP14.25□□□□□ -0.13
CTSS-203ENST00000472977 DPY19L2Q6NUT2 758 aa14.17□□□□□ -0.14
CTSS-203ENST00000472977 HS3ST6Q96QI5 342 aa14.17□□□□□ -0.14
CTSS-203ENST00000472977 POTEB3A0JP26 581 aa14.16□□□□□ -0.14
CTSS-203ENST00000472977 POTEBQ6S5H4 581 aa14.16□□□□□ -0.14
CTSS-203ENST00000472977 CABP2Q9NPB3 220 aa14.15□□□□□ -0.14
CTSS-203ENST00000472977 SPOCK2Q92563 424 aa14.14□□□□□ -0.15
CTSS-203ENST00000472977 KRTAP3-3Q9BYR6 98 aa14.14□□□□□ -0.15
CTSS-203ENST00000472977 KRTAP3-2Q9BYR7 98 aa14.14□□□□□ -0.15
CTSS-203ENST00000472977 FAM205CA6NFA0 338 aa14.13□□□□□ -0.15
CTSS-203ENST00000472977 BOLA1Q9Y3E2 137 aa14.13□□□□□ -0.15
CTSS-203ENST00000472977 IFNLR1Q8IU57 520 aaPredicted RBP14.11□□□□□ -0.15
CTSS-203ENST00000472977 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
CTSS-203ENST00000472977 G3V3G9 751 aa14.1□□□□□ -0.15
CTSS-203ENST00000472977 HOXB3P14651 431 aaPredicted RBP14.08□□□□□ -0.16
CTSS-203ENST00000472977 HOXB1P14653 301 aaPredicted RBP13.99□□□□□ -0.17
CTSS-203ENST00000472977 ZNF710Q8N1W2 664 aa13.98□□□□□ -0.17
CTSS-203ENST00000472977 DOK7Q18PE1 504 aa13.97□□□□□ -0.17
CTSS-203ENST00000472977 EFCAB3Q8N7B9 438 aa13.94□□□□□ -0.18
CTSS-203ENST00000472977 TRIM41Q8WV44 630 aa13.94□□□□□ -0.18
CTSS-203ENST00000472977 ERBB3P21860 1342 aa13.9□□□□□ -0.18
CTSS-203ENST00000472977 RIMBP2O15034 1052 aa13.88□□□□□ -0.19
CTSS-203ENST00000472977 MICALL2Q8IY33 904 aa13.87□□□□□ -0.19
CTSS-203ENST00000472977 TMEM92Q6UXU6 159 aa13.84□□□□□ -0.19
CTSS-203ENST00000472977 VARS2Q5ST30 1063 aaKnown RBP13.83□□□□□ -0.2
CTSS-203ENST00000472977 ZSWIM6Q9HCJ5 1215 aa13.82□□□□□ -0.2
CTSS-203ENST00000472977 SOX12O15370 315 aa13.79□□□□□ -0.2
CTSS-203ENST00000472977 RIOK3O14730 519 aaKnown RBP13.78□□□□□ -0.2
CTSS-203ENST00000472977 MS4A4AQ96JQ5 239 aa13.78□□□□□ -0.2
CTSS-203ENST00000472977 RNF166Q96A37 237 aaPredicted RBP13.77□□□□□ -0.21
CTSS-203ENST00000472977 RNF25Q96BH1 459 aaPredicted RBP13.76□□□□□ -0.21
CTSS-203ENST00000472977 GPR153Q6NV75 609 aa13.75□□□□□ -0.21
CTSS-203ENST00000472977 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms