RNA–Protein interactions for RNA: ENST00000472794.1

RGPD5-208, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 2

Gene RGPD5, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-208ENST00000472794 ATMINO43313 823 aaPredicted RBP16■□□□□ 0.15
RGPD5-208ENST00000472794 CCDC61Q9Y6R9 512 aa15.99■□□□□ 0.15
RGPD5-208ENST00000472794 METRNQ9UJH8 293 aa15.98■□□□□ 0.15
RGPD5-208ENST00000472794 SLC39A7Q92504 469 aa15.96■□□□□ 0.15
RGPD5-208ENST00000472794 C7P10643 843 aa15.94■□□□□ 0.14
RGPD5-208ENST00000472794 KIF12Q96FN5 646 aa15.9■□□□□ 0.14
RGPD5-208ENST00000472794 PLEKHG5O94827 1062 aa15.86■□□□□ 0.13
RGPD5-208ENST00000472794 POTEJP0CG39 1038 aa15.86■□□□□ 0.13
RGPD5-208ENST00000472794 ATN1P54259 1190 aaPredicted RBP15.86■□□□□ 0.13
RGPD5-208ENST00000472794 MIER1Q8N108 512 aa15.86■□□□□ 0.13
RGPD5-208ENST00000472794 RASEFQ8IZ41 740 aa15.82■□□□□ 0.12
RGPD5-208ENST00000472794 POTEMA6NI47 508 aa15.8■□□□□ 0.12
RGPD5-208ENST00000472794 BMP2KQ9NSY1 1161 aaPredicted RBP15.8■□□□□ 0.12
RGPD5-208ENST00000472794 MAP3K13O43283 966 aa15.79■□□□□ 0.12
RGPD5-208ENST00000472794 TRPC6Q9Y210 931 aa15.79■□□□□ 0.12
RGPD5-208ENST00000472794 MAMSTRQ6ZN01 415 aa15.78■□□□□ 0.12
RGPD5-208ENST00000472794 POTEGQ6S5H5 508 aa15.75■□□□□ 0.11
RGPD5-208ENST00000472794 TIE1P35590 1138 aa15.73■□□□□ 0.11
RGPD5-208ENST00000472794 POTEFA5A3E0 1075 aa15.71■□□□□ 0.11
RGPD5-208ENST00000472794 PLCD3Q8N3E9 789 aa15.71■□□□□ 0.11
RGPD5-208ENST00000472794 SCUBE2Q9NQ36 999 aa15.68■□□□□ 0.1
RGPD5-208ENST00000472794 TTLL13PA6NNM8 815 aa15.64■□□□□ 0.09
RGPD5-208ENST00000472794 NUBP1P53384 320 aa15.61■□□□□ 0.09
RGPD5-208ENST00000472794 SGIP1Q9BQI5 828 aa15.61■□□□□ 0.09
RGPD5-208ENST00000472794 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
RGPD5-208ENST00000472794 LCE2DQ5TA82 110 aaPredicted RBP15.6■□□□□ 0.09
RGPD5-208ENST00000472794 PCDHB13Q9Y5F0 798 aa15.59■□□□□ 0.09
RGPD5-208ENST00000472794 COLQQ9Y215 455 aaPredicted RBP15.58■□□□□ 0.08
RGPD5-208ENST00000472794 PCDH10Q9P2E7 1040 aa15.57■□□□□ 0.08
RGPD5-208ENST00000472794 SEC24BO95487 1268 aa15.54■□□□□ 0.08
RGPD5-208ENST00000472794 FAM163AQ96GL9 167 aaPredicted RBP15.54■□□□□ 0.08
RGPD5-208ENST00000472794 TRIM35Q9UPQ4 493 aa15.54■□□□□ 0.08
RGPD5-208ENST00000472794 IER5LQ5T953 404 aa15.52■□□□□ 0.08
RGPD5-208ENST00000472794 IFNL1Q8IU54 200 aa15.5■□□□□ 0.07
RGPD5-208ENST00000472794 FKBP8Q14318 412 aa15.49■□□□□ 0.07
RGPD5-208ENST00000472794 FAM212AQ96EL1 285 aa15.49■□□□□ 0.07
RGPD5-208ENST00000472794 TMEM106CQ9BVX2 250 aa15.42■□□□□ 0.06
RGPD5-208ENST00000472794 PLCG2P16885 1265 aa15.33■□□□□ 0.04
RGPD5-208ENST00000472794 DCAF8Q5TAQ9 597 aa15.31■□□□□ 0.04
RGPD5-208ENST00000472794 IRX5P78411 483 aaPredicted RBP15.3■□□□□ 0.04
RGPD5-208ENST00000472794 SLAIN1Q8ND83 568 aa15.3■□□□□ 0.04
RGPD5-208ENST00000472794 PYGBP11216 843 aa15.29■□□□□ 0.04
RGPD5-208ENST00000472794 FBXO3Q9UK99 471 aa15.26■□□□□ 0.03
RGPD5-208ENST00000472794 OCEL1Q9H607 264 aa15.21■□□□□ 0.03
RGPD5-208ENST00000472794 PCDHB8Q9UN66 801 aa15.21■□□□□ 0.03
RGPD5-208ENST00000472794 ST18O60284 1047 aa15.2■□□□□ 0.02
RGPD5-208ENST00000472794 CDAN1Q8IWY9 1227 aa15.2■□□□□ 0.02
RGPD5-208ENST00000472794 VASPP50552 380 aaPredicted RBP15.1■□□□□ 0.01
RGPD5-208ENST00000472794 GSE1Q14687 1217 aa15.1■□□□□ 0.01
RGPD5-208ENST00000472794 KLHL34Q8N239 644 aa15.09■□□□□ 0.01
RGPD5-208ENST00000472794 ZNF467Q7Z7K2 595 aaPredicted RBP15.08■□□□□ 0
RGPD5-208ENST00000472794 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.08■□□□□ 0
RGPD5-208ENST00000472794 PDCD7Q8N8D1 485 aaKnown RBP15.04■□□□□ -0
RGPD5-208ENST00000472794 TMEM121BQ9BXQ6 578 aaPredicted RBP15.03■□□□□ -0
RGPD5-208ENST00000472794 SNPHO15079 494 aa15.02■□□□□ -0
RGPD5-208ENST00000472794 CHRM1P11229 460 aaPredicted RBP15.02■□□□□ -0
RGPD5-208ENST00000472794 MKRN3Q13064 507 aaKnown RBP14.99□□□□□ -0.01
RGPD5-208ENST00000472794 GOLGA2Q08379 1002 aa14.98□□□□□ -0.01
RGPD5-208ENST00000472794 PSEN1P49768 467 aa14.95□□□□□ -0.02
RGPD5-208ENST00000472794 C3orf67Q6ZVT6 689 aa14.94□□□□□ -0.02
RGPD5-208ENST00000472794 L3MBTL3Q96JM7 780 aaPredicted RBP14.93□□□□□ -0.02
RGPD5-208ENST00000472794 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.92□□□□□ -0.02
RGPD5-208ENST00000472794 MARVELD3Q96A59 401 aa14.91□□□□□ -0.02
RGPD5-208ENST00000472794 PDAP1Q13442 181 aaKnown RBP14.86□□□□□ -0.03
RGPD5-208ENST00000472794 ILDR1Q86SU0 546 aaPredicted RBP14.86□□□□□ -0.03
RGPD5-208ENST00000472794 SPNS2Q8IVW8 549 aa14.84□□□□□ -0.03
RGPD5-208ENST00000472794 MMRN1Q13201 1228 aa14.82□□□□□ -0.04
RGPD5-208ENST00000472794 SPOCK2Q92563 424 aa14.81□□□□□ -0.04
RGPD5-208ENST00000472794 IFNLR1Q8IU57 520 aaPredicted RBP14.8□□□□□ -0.04
RGPD5-208ENST00000472794 EMP3P54852 163 aa14.79□□□□□ -0.04
RGPD5-208ENST00000472794 DPY19L2Q6NUT2 758 aa14.78□□□□□ -0.04
RGPD5-208ENST00000472794 CIZ1Q9ULV3 898 aaPredicted RBP14.78□□□□□ -0.04
RGPD5-208ENST00000472794 CABP2Q9NPB3 220 aa14.77□□□□□ -0.05
RGPD5-208ENST00000472794 BOLA1Q9Y3E2 137 aa14.71□□□□□ -0.05
RGPD5-208ENST00000472794 POTEB3A0JP26 581 aa14.7□□□□□ -0.06
RGPD5-208ENST00000472794 POTEBQ6S5H4 581 aa14.7□□□□□ -0.06
RGPD5-208ENST00000472794 HS3ST6Q96QI5 342 aa14.7□□□□□ -0.06
RGPD5-208ENST00000472794 FAM205CA6NFA0 338 aa14.67□□□□□ -0.06
RGPD5-208ENST00000472794 G3V3G9 751 aa14.67□□□□□ -0.06
RGPD5-208ENST00000472794 KRTAP3-3Q9BYR6 98 aa14.66□□□□□ -0.06
RGPD5-208ENST00000472794 KRTAP3-2Q9BYR7 98 aa14.66□□□□□ -0.06
RGPD5-208ENST00000472794 HOXB3P14651 431 aaPredicted RBP14.63□□□□□ -0.07
RGPD5-208ENST00000472794 TRIM41Q8WV44 630 aa14.58□□□□□ -0.08
RGPD5-208ENST00000472794 EFCAB3Q8N7B9 438 aa14.56□□□□□ -0.08
RGPD5-208ENST00000472794 HOXB1P14653 301 aaPredicted RBP14.54□□□□□ -0.08
RGPD5-208ENST00000472794 ZNF710Q8N1W2 664 aa14.53□□□□□ -0.08
RGPD5-208ENST00000472794 DOK7Q18PE1 504 aa14.51□□□□□ -0.09
RGPD5-208ENST00000472794 MICALL2Q8IY33 904 aa14.45□□□□□ -0.1
RGPD5-208ENST00000472794 ERBB3P21860 1342 aa14.44□□□□□ -0.1
RGPD5-208ENST00000472794 TMEM92Q6UXU6 159 aa14.43□□□□□ -0.1
RGPD5-208ENST00000472794 RIMBP2O15034 1052 aa14.42□□□□□ -0.1
RGPD5-208ENST00000472794 RIOK3O14730 519 aaKnown RBP14.4□□□□□ -0.1
RGPD5-208ENST00000472794 SOX12O15370 315 aa14.4□□□□□ -0.1
RGPD5-208ENST00000472794 RNF25Q96BH1 459 aaPredicted RBP14.4□□□□□ -0.1
RGPD5-208ENST00000472794 MS4A4AQ96JQ5 239 aa14.38□□□□□ -0.11
RGPD5-208ENST00000472794 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.37□□□□□ -0.11
RGPD5-208ENST00000472794 ZFP91Q96JP5 570 aaPredicted RBP14.37□□□□□ -0.11
RGPD5-208ENST00000472794 VARS2Q5ST30 1063 aaKnown RBP14.36□□□□□ -0.11
RGPD5-208ENST00000472794 ZSWIM6Q9HCJ5 1215 aa14.36□□□□□ -0.11
RGPD5-208ENST00000472794 VGFO15240 615 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms