RNA–Protein interactions for RNA: ENST00000472375.5

HMGCS2-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 5

Gene HMGCS2, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-202ENST00000472375 RIOK3O14730 519 aaKnown RBP11.32□□□□□ -0.6
HMGCS2-202ENST00000472375 FXR2P51116 673 aaKnown RBP eCLIP11.32□□□□□ -0.6
HMGCS2-202ENST00000472375 HS6ST3Q8IZP7 471 aa11.32□□□□□ -0.6
HMGCS2-202ENST00000472375 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
HMGCS2-202ENST00000472375 RNF25Q96BH1 459 aaPredicted RBP11.31□□□□□ -0.6
HMGCS2-202ENST00000472375 FARP1Q9Y4F1 1045 aaPredicted RBP11.31□□□□□ -0.6
HMGCS2-202ENST00000472375 CHGAP10645 457 aaKnown RBP11.3□□□□□ -0.6
HMGCS2-202ENST00000472375 PRKAR2AP13861 404 aaKnown RBP11.3□□□□□ -0.6
HMGCS2-202ENST00000472375 CHRDL2Q6WN34 429 aa11.29□□□□□ -0.6
HMGCS2-202ENST00000472375 VGFO15240 615 aaPredicted RBP11.27□□□□□ -0.61
HMGCS2-202ENST00000472375 DNAJC5Q9H3Z4 198 aa11.27□□□□□ -0.61
HMGCS2-202ENST00000472375 HAP1P54257 671 aaPredicted RBP11.26□□□□□ -0.61
HMGCS2-202ENST00000472375 SGIP1Q9BQI5 828 aa11.23□□□□□ -0.61
HMGCS2-202ENST00000472375 PAXIP1Q6ZW49 1069 aaPredicted RBP11.22□□□□□ -0.61
HMGCS2-202ENST00000472375 SPRYD3Q8NCJ5 442 aa11.22□□□□□ -0.61
HMGCS2-202ENST00000472375 PAK3O75914 559 aaPredicted RBP11.21□□□□□ -0.61
HMGCS2-202ENST00000472375 PYGBP11216 843 aa11.2□□□□□ -0.62
HMGCS2-202ENST00000472375 ZNF467Q7Z7K2 595 aaPredicted RBP11.19□□□□□ -0.62
HMGCS2-202ENST00000472375 PIP4P2Q8N4L2 257 aa11.19□□□□□ -0.62
HMGCS2-202ENST00000472375 CFAP44Q96MT7 982 aa11.18□□□□□ -0.62
HMGCS2-202ENST00000472375 TSPYL2Q9H2G4 693 aaPredicted RBP11.18□□□□□ -0.62
HMGCS2-202ENST00000472375 STK25O00506 426 aa11.17□□□□□ -0.62
HMGCS2-202ENST00000472375 VSIG10Q8N0Z9 540 aa11.17□□□□□ -0.62
HMGCS2-202ENST00000472375 CCDC61Q9Y6R9 512 aa11.15□□□□□ -0.62
HMGCS2-202ENST00000472375 RYDENQ9NUL5 291 aaKnown RBP11.13□□□□□ -0.63
HMGCS2-202ENST00000472375 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.11□□□□□ -0.63
HMGCS2-202ENST00000472375 ZFP91Q96JP5 570 aaPredicted RBP11.11□□□□□ -0.63
HMGCS2-202ENST00000472375 BCL11BQ9C0K0 894 aaPredicted RBP11.1□□□□□ -0.63
HMGCS2-202ENST00000472375 PDAP1Q13442 181 aaKnown RBP11.09□□□□□ -0.63
HMGCS2-202ENST00000472375 ZNF579Q8NAF0 562 aaKnown RBP11.09□□□□□ -0.63
HMGCS2-202ENST00000472375 STK24Q9Y6E0 443 aa11.08□□□□□ -0.64
HMGCS2-202ENST00000472375 NKX1-1Q15270 411 aaPredicted RBP11.04□□□□□ -0.64
HMGCS2-202ENST00000472375 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
HMGCS2-202ENST00000472375 PCDHB13Q9Y5F0 798 aa11.02□□□□□ -0.65
HMGCS2-202ENST00000472375 GTPBP6O43824 516 aaPredicted RBP11□□□□□ -0.65
HMGCS2-202ENST00000472375 KIF12Q96FN5 646 aa10.99□□□□□ -0.65
HMGCS2-202ENST00000472375 PCDHB8Q9UN66 801 aa10.99□□□□□ -0.65
HMGCS2-202ENST00000472375 PSEN1P49768 467 aa10.98□□□□□ -0.65
HMGCS2-202ENST00000472375 ZRANB1Q9UGI0 708 aa10.98□□□□□ -0.65
HMGCS2-202ENST00000472375 TSHZ2Q9NRE2 1034 aa10.97□□□□□ -0.65
HMGCS2-202ENST00000472375 MAP3K13O43283 966 aa10.95□□□□□ -0.66
HMGCS2-202ENST00000472375 IFNL1Q8IU54 200 aa10.95□□□□□ -0.66
HMGCS2-202ENST00000472375 BCANQ96GW7 911 aa10.95□□□□□ -0.66
HMGCS2-202ENST00000472375 KDM2AQ9Y2K7 1162 aa10.94□□□□□ -0.66
HMGCS2-202ENST00000472375 C19orf67A6NJJ6 358 aa10.91□□□□□ -0.66
HMGCS2-202ENST00000472375 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
HMGCS2-202ENST00000472375 CLCN6P51797 869 aa10.85□□□□□ -0.67
HMGCS2-202ENST00000472375 SOX12O15370 315 aa10.84□□□□□ -0.67
HMGCS2-202ENST00000472375 MFRPQ9BY79 579 aa10.83□□□□□ -0.68
HMGCS2-202ENST00000472375 CABP2Q9NPB3 220 aa10.83□□□□□ -0.68
HMGCS2-202ENST00000472375 NLRP6P59044 892 aa10.82□□□□□ -0.68
HMGCS2-202ENST00000472375 MS4A3Q96HJ5 214 aa10.8□□□□□ -0.68
HMGCS2-202ENST00000472375 GOLGA2Q08379 1002 aa10.79□□□□□ -0.68
HMGCS2-202ENST00000472375 EFCAB3Q8N7B9 438 aa10.79□□□□□ -0.68
HMGCS2-202ENST00000472375 TIE1P35590 1138 aa10.78□□□□□ -0.68
HMGCS2-202ENST00000472375 TMEM106CQ9BVX2 250 aa10.77□□□□□ -0.69
HMGCS2-202ENST00000472375 FBXO22Q8NEZ5 403 aa10.76□□□□□ -0.69
HMGCS2-202ENST00000472375 P3H3Q8IVL6 736 aa10.74□□□□□ -0.69
HMGCS2-202ENST00000472375 HAX1O00165 279 aa10.73□□□□□ -0.69
HMGCS2-202ENST00000472375 NBR1Q14596 966 aa10.72□□□□□ -0.69
HMGCS2-202ENST00000472375 PHF8Q9UPP1 1060 aa10.72□□□□□ -0.69
HMGCS2-202ENST00000472375 MKRN3Q13064 507 aaKnown RBP10.71□□□□□ -0.69
HMGCS2-202ENST00000472375 TTLL13PA6NNM8 815 aa10.68□□□□□ -0.7
HMGCS2-202ENST00000472375 TRPC6Q9Y210 931 aa10.68□□□□□ -0.7
HMGCS2-202ENST00000472375 WDR70Q9NW82 654 aa10.67□□□□□ -0.7
HMGCS2-202ENST00000472375 BMP2KQ9NSY1 1161 aaPredicted RBP10.65□□□□□ -0.7
HMGCS2-202ENST00000472375 GALR2O43603 387 aaPredicted RBP10.64□□□□□ -0.71
HMGCS2-202ENST00000472375 PPP1R37O75864 691 aa10.63□□□□□ -0.71
HMGCS2-202ENST00000472375 CADPS2Q86UW7 1296 aa10.63□□□□□ -0.71
HMGCS2-202ENST00000472375 MS4A4AQ96JQ5 239 aa10.63□□□□□ -0.71
HMGCS2-202ENST00000472375 ILDR1Q86SU0 546 aaPredicted RBP10.62□□□□□ -0.71
HMGCS2-202ENST00000472375 TRIM35Q9UPQ4 493 aa10.62□□□□□ -0.71
HMGCS2-202ENST00000472375 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.59□□□□□ -0.71
HMGCS2-202ENST00000472375 IER5LQ5T953 404 aa10.58□□□□□ -0.72
HMGCS2-202ENST00000472375 EVX2Q03828 476 aa10.56□□□□□ -0.72
HMGCS2-202ENST00000472375 ASTLQ6HA08 431 aaPredicted RBP10.56□□□□□ -0.72
HMGCS2-202ENST00000472375 PDE4AP27815 886 aa10.54□□□□□ -0.72
HMGCS2-202ENST00000472375 KCNV2Q8TDN2 545 aa10.54□□□□□ -0.72
HMGCS2-202ENST00000472375 CRISPLD2Q9H0B8 497 aa10.53□□□□□ -0.72
HMGCS2-202ENST00000472375 ATMINO43313 823 aaPredicted RBP10.52□□□□□ -0.73
HMGCS2-202ENST00000472375 MFSD10Q14728 455 aa10.52□□□□□ -0.73
HMGCS2-202ENST00000472375 ATN1P54259 1190 aaPredicted RBP10.51□□□□□ -0.73
HMGCS2-202ENST00000472375 E2F4Q16254 413 aa10.51□□□□□ -0.73
HMGCS2-202ENST00000472375 POTEHQ6S545 545 aa10.51□□□□□ -0.73
HMGCS2-202ENST00000472375 ARHGEF1Q92888 912 aaKnown RBP10.5□□□□□ -0.73
HMGCS2-202ENST00000472375 NCKAP5LQ9HCH0 1330 aa10.5□□□□□ -0.73
HMGCS2-202ENST00000472375 DDX27Q96GQ7 796 aaKnown RBP10.49□□□□□ -0.73
HMGCS2-202ENST00000472375 GABBR2O75899 941 aa10.48□□□□□ -0.73
HMGCS2-202ENST00000472375 IRX5P78411 483 aaPredicted RBP10.48□□□□□ -0.73
HMGCS2-202ENST00000472375 PDCD7Q8N8D1 485 aaKnown RBP10.48□□□□□ -0.73
HMGCS2-202ENST00000472375 LARP6Q9BRS8 491 aaKnown RBP10.48□□□□□ -0.73
HMGCS2-202ENST00000472375 OCEL1Q9H607 264 aa10.48□□□□□ -0.73
HMGCS2-202ENST00000472375 TPRNQ4KMQ1 711 aa10.46□□□□□ -0.73
HMGCS2-202ENST00000472375 G3V3G9 751 aa10.45□□□□□ -0.74
HMGCS2-202ENST00000472375 PLCG2P16885 1265 aa10.45□□□□□ -0.74
HMGCS2-202ENST00000472375 MICALL2Q8IY33 904 aa10.45□□□□□ -0.74
HMGCS2-202ENST00000472375 DCBLD2Q96PD2 775 aa10.45□□□□□ -0.74
HMGCS2-202ENST00000472375 TULP1O00294 542 aaPredicted RBP10.44□□□□□ -0.74
HMGCS2-202ENST00000472375 ARIH1Q9Y4X5 557 aaPredicted RBP10.43□□□□□ -0.74
HMGCS2-202ENST00000472375 GPHNQ9NQX3 736 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms